RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 Q6ZNB5 142 aa12.72□□□□□ -0.37
SFXN1-202ENST00000421887 KIAA1468Q9P260 1216 aa12.72□□□□□ -0.37
SFXN1-202ENST00000421887 SOWAHBA6NEL2 793 aa12.71□□□□□ -0.37
SFXN1-202ENST00000421887 TYW1BQ6NUM6 668 aa12.71□□□□□ -0.37
SFXN1-202ENST00000421887 MFSD10Q14728 455 aa12.7□□□□□ -0.38
SFXN1-202ENST00000421887 LAPTM4BQ86VI4 370 aa12.7□□□□□ -0.38
SFXN1-202ENST00000421887 FBXW7Q969H0 707 aa12.7□□□□□ -0.38
SFXN1-202ENST00000421887 ZFRQ96KR1 1074 aaKnown RBP12.7□□□□□ -0.38
SFXN1-202ENST00000421887 WBP1LQ9NX94 342 aa12.69□□□□□ -0.38
SFXN1-202ENST00000421887 PHF14O94880 888 aa12.68□□□□□ -0.38
SFXN1-202ENST00000421887 SEPT9Q9UHD8 586 aaPredicted RBP12.68□□□□□ -0.38
SFXN1-202ENST00000421887 KCNC4Q03721 635 aa12.67□□□□□ -0.38
SFXN1-202ENST00000421887 NYAP1Q6ZVC0 841 aa12.66□□□□□ -0.38
SFXN1-202ENST00000421887 C6orf132Q5T0Z8 1188 aa12.63□□□□□ -0.39
SFXN1-202ENST00000421887 RBM33Q96EV2 1170 aaKnown RBP12.6□□□□□ -0.39
SFXN1-202ENST00000421887 ONECUT3O60422 494 aaPredicted RBP12.59□□□□□ -0.39
SFXN1-202ENST00000421887 EPAS1Q99814 870 aa12.59□□□□□ -0.39
SFXN1-202ENST00000421887 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.59□□□□□ -0.39
SFXN1-202ENST00000421887 HPS5Q9UPZ3 1129 aa12.59□□□□□ -0.39
SFXN1-202ENST00000421887 TRIM6-TRIM34B2RNG4 842 aa12.58□□□□□ -0.4
SFXN1-202ENST00000421887 DCAF8L2P0C7V8 631 aa12.58□□□□□ -0.4
SFXN1-202ENST00000421887 CADPS2Q86UW7 1296 aa12.58□□□□□ -0.4
SFXN1-202ENST00000421887 FAM98CQ17RN3 349 aaKnown RBP12.57□□□□□ -0.4
SFXN1-202ENST00000421887 LRCH3Q96II8 777 aa12.57□□□□□ -0.4
SFXN1-202ENST00000421887 TSR3Q9UJK0 312 aaKnown RBP12.57□□□□□ -0.4
SFXN1-202ENST00000421887 DPYSL4O14531 572 aa12.55□□□□□ -0.4
SFXN1-202ENST00000421887 DDX12PQ92771 950 aa12.54□□□□□ -0.4
SFXN1-202ENST00000421887 GFRA3O60609 400 aa12.5□□□□□ -0.41
SFXN1-202ENST00000421887 LAPTM4AQ15012 233 aa12.5□□□□□ -0.41
SFXN1-202ENST00000421887 PPP4CP60510 307 aa12.48□□□□□ -0.41
SFXN1-202ENST00000421887 PACS2Q86VP3 889 aa12.48□□□□□ -0.41
SFXN1-202ENST00000421887 CAMK2BQ13554 666 aa12.47□□□□□ -0.41
SFXN1-202ENST00000421887 TSKSQ9UJT2 592 aa12.46□□□□□ -0.41
SFXN1-202ENST00000421887 MAP3K7O43318 606 aa12.45□□□□□ -0.42
SFXN1-202ENST00000421887 NBR1Q14596 966 aa12.45□□□□□ -0.42
SFXN1-202ENST00000421887 TRAF7Q6Q0C0 670 aa12.45□□□□□ -0.42
SFXN1-202ENST00000421887 TSR1Q2NL82 804 aaKnown RBP12.44□□□□□ -0.42
SFXN1-202ENST00000421887 PRKD2Q9BZL6 878 aa12.42□□□□□ -0.42
SFXN1-202ENST00000421887 SMAPO00193 183 aa12.41□□□□□ -0.42
SFXN1-202ENST00000421887 LCE2BO14633 110 aa12.41□□□□□ -0.42
SFXN1-202ENST00000421887 EN1Q05925 392 aaPredicted RBP12.41□□□□□ -0.42
SFXN1-202ENST00000421887 SAMD7Q7Z3H4 446 aa12.41□□□□□ -0.42
SFXN1-202ENST00000421887 TJAP1Q5JTD0 557 aa12.39□□□□□ -0.43
SFXN1-202ENST00000421887 PPP1R18Q6NYC8 613 aa12.36□□□□□ -0.43
SFXN1-202ENST00000421887 CDCA7LQ96GN5 454 aa12.36□□□□□ -0.43
SFXN1-202ENST00000421887 MTRQ99707 1265 aa12.36□□□□□ -0.43
SFXN1-202ENST00000421887 RNF40O75150 1001 aa12.34□□□□□ -0.43
SFXN1-202ENST00000421887 IL21Q9HBE4 155 aa12.34□□□□□ -0.43
SFXN1-202ENST00000421887 NRG2O14511 850 aaPredicted RBP12.33□□□□□ -0.44
SFXN1-202ENST00000421887 PRSS12P56730 875 aa12.32□□□□□ -0.44
SFXN1-202ENST00000421887 PNMA3Q9UL41 463 aa12.32□□□□□ -0.44
SFXN1-202ENST00000421887 PDIA6Q15084 440 aa12.31□□□□□ -0.44
SFXN1-202ENST00000421887 ZNF516Q92618 1163 aa12.31□□□□□ -0.44
SFXN1-202ENST00000421887 FAM198AQ9UFP1 575 aa12.31□□□□□ -0.44
SFXN1-202ENST00000421887 TATDN2Q93075 761 aa12.3□□□□□ -0.44
SFXN1-202ENST00000421887 NISCHQ9Y2I1 1504 aa12.29□□□□□ -0.44
SFXN1-202ENST00000421887 C3orf80F5H4A9 247 aa12.29□□□□□ -0.44
SFXN1-202ENST00000421887 HDGFP51858 240 aaKnown RBP12.29□□□□□ -0.44
SFXN1-202ENST00000421887 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.29□□□□□ -0.44
SFXN1-202ENST00000421887 V9GY48 417 aaPredicted RBP12.29□□□□□ -0.44
SFXN1-202ENST00000421887 NBPF26B4DH59 902 aa12.28□□□□□ -0.44
SFXN1-202ENST00000421887 GRXCR2A6NFK2 248 aa12.27□□□□□ -0.45
SFXN1-202ENST00000421887 SPDYE16A6NNV3 312 aaPredicted RBP12.27□□□□□ -0.45
SFXN1-202ENST00000421887 CERKQ8TCT0 537 aa12.27□□□□□ -0.45
SFXN1-202ENST00000421887 PDZRN3Q9UPQ7 1066 aa12.25□□□□□ -0.45
SFXN1-202ENST00000421887 APLP1P51693 650 aa12.24□□□□□ -0.45
SFXN1-202ENST00000421887 ZNF787Q6DD87 383 aa12.24□□□□□ -0.45
SFXN1-202ENST00000421887 NUDT18Q6ZVK8 323 aa12.24□□□□□ -0.45
SFXN1-202ENST00000421887 NKX2-3Q8TAU0 364 aa12.24□□□□□ -0.45
SFXN1-202ENST00000421887 PRIM1P49642 420 aaKnown RBP12.23□□□□□ -0.45
SFXN1-202ENST00000421887 COPS2P61201 443 aa12.21□□□□□ -0.45
SFXN1-202ENST00000421887 CDHR5Q9HBB8 845 aa12.19□□□□□ -0.46
SFXN1-202ENST00000421887 GGCXP38435 758 aa12.18□□□□□ -0.46
SFXN1-202ENST00000421887 E2F4Q16254 413 aa12.16□□□□□ -0.46
SFXN1-202ENST00000421887 SWT1Q5T5J6 900 aaKnown RBP12.14□□□□□ -0.47
SFXN1-202ENST00000421887 NECTIN2Q92692 538 aa12.14□□□□□ -0.47
SFXN1-202ENST00000421887 OSBPP22059 807 aa12.12□□□□□ -0.47
SFXN1-202ENST00000421887 SLF2Q8IX21 1173 aa12.12□□□□□ -0.47
SFXN1-202ENST00000421887 BBXQ8WY36 941 aaPredicted RBP12.12□□□□□ -0.47
SFXN1-202ENST00000421887 ZNF775Q96BV0 537 aaPredicted RBP12.11□□□□□ -0.47
SFXN1-202ENST00000421887 RBM27Q9P2N5 1060 aaKnown RBP12.11□□□□□ -0.47
SFXN1-202ENST00000421887 TMUB1Q9BVT8 246 aa12.1□□□□□ -0.47
SFXN1-202ENST00000421887 WDR70Q9NW82 654 aa12.1□□□□□ -0.47
SFXN1-202ENST00000421887 ZPR1O75312 459 aa12.09□□□□□ -0.47
SFXN1-202ENST00000421887 SLC4A3P48751 1232 aa12.09□□□□□ -0.47
SFXN1-202ENST00000421887 PADI6Q6TGC4 694 aa12.09□□□□□ -0.47
SFXN1-202ENST00000421887 SLC19A1P41440 591 aa12.05□□□□□ -0.48
SFXN1-202ENST00000421887 SPRYD3Q8NCJ5 442 aa12.05□□□□□ -0.48
SFXN1-202ENST00000421887 ARIH1Q9Y4X5 557 aaPredicted RBP12.05□□□□□ -0.48
SFXN1-202ENST00000421887 PCDHB3Q9Y5E6 796 aa12.05□□□□□ -0.48
SFXN1-202ENST00000421887 PKDCCQ504Y2 493 aa12.04□□□□□ -0.48
SFXN1-202ENST00000421887 RNF223E7ERA6 249 aa12.03□□□□□ -0.48
SFXN1-202ENST00000421887 TTC13Q8NBP0 860 aa12.03□□□□□ -0.48
SFXN1-202ENST00000421887 NPDC1Q9NQX5 325 aaPredicted RBP12.03□□□□□ -0.48
SFXN1-202ENST00000421887 PRR14Q9BWN1 585 aa12.02□□□□□ -0.49
SFXN1-202ENST00000421887 BLOC1S3Q6QNY0 202 aa12.01□□□□□ -0.49
SFXN1-202ENST00000421887 TRIM67Q6ZTA4 783 aa12.01□□□□□ -0.49
SFXN1-202ENST00000421887 EYA1Q99502 592 aa11.99□□□□□ -0.49
SFXN1-202ENST00000421887 PPEF1O14829 653 aaPredicted RBP11.97□□□□□ -0.49
SFXN1-202ENST00000421887 TLL1O43897 1013 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms