RNA–Protein interactions for RNA: ENST00000421671.6

LEMD2-202, Transcript of LEM domain containing 2, humanhuman

TSL 3

Gene LEMD2, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-202ENST00000421671 RALGAPBQ86X10 1494 aa29.71■■■□□ 2.35
LEMD2-202ENST00000421671 PRKRIP1Q9H875 184 aaPredicted RBP29.68■■■□□ 2.34
LEMD2-202ENST00000421671 CCDC184Q52MB2 194 aa29.66■■■□□ 2.34
LEMD2-202ENST00000421671 ABCC1P33527 1531 aa29.64■■■□□ 2.33
LEMD2-202ENST00000421671 IQGAP3Q86VI3 1631 aa29.63■■■□□ 2.33
LEMD2-202ENST00000421671 DUOX2Q9NRD8 1548 aa29.62■■■□□ 2.33
LEMD2-202ENST00000421671 PLA2R1Q13018 1463 aa29.61■■■□□ 2.33
LEMD2-202ENST00000421671 EFCAB2Q5VUJ9 269 aa29.6■■■□□ 2.33
LEMD2-202ENST00000421671 KDM2AQ9Y2K7 1162 aa29.59■■■□□ 2.33
LEMD2-202ENST00000421671 DCAF11Q8TEB1 546 aa29.59■■■□□ 2.33
LEMD2-202ENST00000421671 MAGI2Q86UL8 1455 aa29.57■■■□□ 2.32
LEMD2-202ENST00000421671 WDR7Q9Y4E6 1490 aa29.57■■■□□ 2.32
LEMD2-202ENST00000421671 ERICH6BQ5W0A0 696 aa29.57■■■□□ 2.32
LEMD2-202ENST00000421671 TRAPPC8Q9Y2L5 1435 aa29.57■■■□□ 2.32
LEMD2-202ENST00000421671 HNRNPUQ00839 825 aaKnown RBP eCLIP29.57■■■□□ 2.32
LEMD2-202ENST00000421671 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.57■■■□□ 2.32
LEMD2-202ENST00000421671 CCDC144AA2RUR9 1427 aa29.56■■■□□ 2.32
LEMD2-202ENST00000421671 ERBINQ96RT1 1412 aa29.56■■■□□ 2.32
LEMD2-202ENST00000421671 CARD11Q9BXL7 1154 aa29.55■■■□□ 2.32
LEMD2-202ENST00000421671 DHX29Q7Z478 1369 aaKnown RBP29.55■■■□□ 2.32
LEMD2-202ENST00000421671 ARID4BQ4LE39 1312 aaPredicted RBP29.52■■■□□ 2.32
LEMD2-202ENST00000421671 ARAP3Q8WWN8 1544 aa29.52■■■□□ 2.32
LEMD2-202ENST00000421671 ASXL2Q76L83 1435 aa29.51■■■□□ 2.32
LEMD2-202ENST00000421671 TRPM1Q7Z4N2 1603 aa29.5■■■□□ 2.31
LEMD2-202ENST00000421671 PRAG1Q86YV5 1406 aa29.48■■■□□ 2.31
LEMD2-202ENST00000421671 MRS2Q9HD23 443 aa29.47■■■□□ 2.31
LEMD2-202ENST00000421671 AFAP1Q8N556 730 aa29.46■■■□□ 2.31
LEMD2-202ENST00000421671 A2MP01023 1474 aa29.46■■■□□ 2.31
LEMD2-202ENST00000421671 POLR3GLQ9BT43 218 aa29.46■■■□□ 2.31
LEMD2-202ENST00000421671 ATP10AO60312 1499 aa29.45■■■□□ 2.31
LEMD2-202ENST00000421671 ST20-MTHFSA0A0A6YYL1 179 aa29.45■■■□□ 2.3
LEMD2-202ENST00000421671 ROCK2O75116 1388 aaKnown RBP29.43■■■□□ 2.3
LEMD2-202ENST00000421671 ZFYVE16Q7Z3T8 1539 aa29.43■■■□□ 2.3
LEMD2-202ENST00000421671 RGL3Q3MIN7 710 aa29.42■■■□□ 2.3
LEMD2-202ENST00000421671 RTEL1-TNFRSF6BF6WH68 1400 aa29.41■■■□□ 2.3
LEMD2-202ENST00000421671 DEKP35659 375 aaKnown RBP29.41■■■□□ 2.3
LEMD2-202ENST00000421671 FAM9BQ8IZU0 186 aa29.41■■■□□ 2.3
LEMD2-202ENST00000421671 ABCA9Q8IUA7 1624 aa29.41■■■□□ 2.3
LEMD2-202ENST00000421671 SPAG9O60271 1321 aaKnown RBP29.4■■■□□ 2.3
LEMD2-202ENST00000421671 PPP4R2Q9NY27 417 aa29.4■■■□□ 2.3
LEMD2-202ENST00000421671 FANCAO15360 1455 aa29.38■■■□□ 2.29
LEMD2-202ENST00000421671 NPM1P06748 294 aaKnown RBP eCLIP29.38■■■□□ 2.29
LEMD2-202ENST00000421671 NBPF1Q3BBV0 1214 aa29.35■■■□□ 2.29
LEMD2-202ENST00000421671 E9PCH4 1651 aa29.35■■■□□ 2.29
LEMD2-202ENST00000421671 GPRASP1Q5JY77 1395 aa29.35■■■□□ 2.29
LEMD2-202ENST00000421671 IRX6P78412 446 aaPredicted RBP29.34■■■□□ 2.29
LEMD2-202ENST00000421671 LAMC1P11047 1609 aa29.33■■■□□ 2.29
LEMD2-202ENST00000421671 INO80Q9ULG1 1556 aaPredicted RBP29.33■■■□□ 2.29
LEMD2-202ENST00000421671 DEPDC5O75140 1603 aa29.32■■■□□ 2.28
LEMD2-202ENST00000421671 PRKCSHP14314 528 aaPredicted RBP29.31■■■□□ 2.28
LEMD2-202ENST00000421671 CNGB1Q14028 1251 aaPredicted RBP29.3■■■□□ 2.28
LEMD2-202ENST00000421671 ATP7AQ04656 1500 aa29.3■■■□□ 2.28
LEMD2-202ENST00000421671 PRDM15P57071 1507 aaPredicted RBP29.29■■■□□ 2.28
LEMD2-202ENST00000421671 EIF2AK4Q9P2K8 1649 aaKnown RBP29.28■■■□□ 2.28
LEMD2-202ENST00000421671 SCAPERQ9BY12 1400 aa29.28■■■□□ 2.28
LEMD2-202ENST00000421671 ADGRL1O94910 1474 aa29.28■■■□□ 2.28
LEMD2-202ENST00000421671 ZBED9Q6R2W3 1325 aa29.27■■■□□ 2.28
LEMD2-202ENST00000421671 TRPM2O94759 1503 aa29.23■■■□□ 2.27
LEMD2-202ENST00000421671 SPHKAPQ2M3C7 1700 aa29.23■■■□□ 2.27
LEMD2-202ENST00000421671 CYB5RLQ6IPT4 315 aa29.22■■■□□ 2.27
LEMD2-202ENST00000421671 TET3O43151 1660 aa29.21■■■□□ 2.27
LEMD2-202ENST00000421671 RNF17Q9BXT8 1623 aaKnown RBP29.21■■■□□ 2.27
LEMD2-202ENST00000421671 VWDEQ8N2E2 1590 aa29.21■■■□□ 2.27
LEMD2-202ENST00000421671 CEP152O94986 1710 aa29.2■■■□□ 2.26
LEMD2-202ENST00000421671 PTPRTO14522 1441 aa29.2■■■□□ 2.26
LEMD2-202ENST00000421671 NOP58Q9Y2X3 529 aaKnown RBP29.19■■■□□ 2.26
LEMD2-202ENST00000421671 CLTCL1P53675 1640 aa29.18■■■□□ 2.26
LEMD2-202ENST00000421671 COL17A1Q9UMD9 1497 aaPredicted RBP29.18■■■□□ 2.26
LEMD2-202ENST00000421671 CD109Q6YHK3 1445 aa29.17■■■□□ 2.26
LEMD2-202ENST00000421671 TESK2Q96S53 571 aa29.17■■■□□ 2.26
LEMD2-202ENST00000421671 MADDQ8WXG6 1647 aa29.16■■■□□ 2.26
LEMD2-202ENST00000421671 MROH1Q8NDA8 1641 aa29.16■■■□□ 2.26
LEMD2-202ENST00000421671 DISP3Q9P2K9 1392 aa29.14■■■□□ 2.25
LEMD2-202ENST00000421671 PNISRQ8TF01 805 aaKnown RBP29.13■■■□□ 2.25
LEMD2-202ENST00000421671 KIDINS220Q9ULH0 1771 aa29.13■■■□□ 2.25
LEMD2-202ENST00000421671 KIF3BO15066 747 aa29.11■■■□□ 2.25
LEMD2-202ENST00000421671 KTN1Q86UP2 1357 aaKnown RBP29.11■■■□□ 2.25
LEMD2-202ENST00000421671 KANK1Q14678 1352 aa29.1■■■□□ 2.25
LEMD2-202ENST00000421671 RALBP1Q15311 655 aa29.09■■■□□ 2.25
LEMD2-202ENST00000421671 MYBBP1AQ9BQG0 1328 aaKnown RBP29.09■■■□□ 2.25
LEMD2-202ENST00000421671 TMC1Q8TDI8 760 aa29.08■■■□□ 2.25
LEMD2-202ENST00000421671 PER1O15534 1290 aaPredicted RBP29.07■■■□□ 2.24
LEMD2-202ENST00000421671 B4GALNT3Q6L9W6 998 aa29.07■■■□□ 2.24
LEMD2-202ENST00000421671 IQGAP1P46940 1657 aa29.07■■■□□ 2.24
LEMD2-202ENST00000421671 RIMBP3CA6NJZ7 1639 aa29.06■■■□□ 2.24
LEMD2-202ENST00000421671 RIMBP3BA6NNM3 1639 aa29.06■■■□□ 2.24
LEMD2-202ENST00000421671 RIMBP3Q9UFD9 1639 aa29.06■■■□□ 2.24
LEMD2-202ENST00000421671 BRD4O60885 1362 aaPredicted RBP29.06■■■□□ 2.24
LEMD2-202ENST00000421671 PARD3Q8TEW0 1356 aa29.04■■■□□ 2.24
LEMD2-202ENST00000421671 LRPPRCP42704 1394 aaKnown RBP29.03■■■□□ 2.24
LEMD2-202ENST00000421671 ZNF518AQ6AHZ1 1483 aa29.02■■■□□ 2.24
LEMD2-202ENST00000421671 NBR1Q14596 966 aa29■■■□□ 2.23
LEMD2-202ENST00000421671 SMG6Q86US8 1419 aaKnown RBP29■■■□□ 2.23
LEMD2-202ENST00000421671 RAPGEF3O95398 923 aa28.99■■■□□ 2.23
LEMD2-202ENST00000421671 TMF1P82094 1093 aa28.99■■■□□ 2.23
LEMD2-202ENST00000421671 NEURL4Q96JN8 1562 aa28.99■■■□□ 2.23
LEMD2-202ENST00000421671 EFCAB6Q5THR3 1501 aa28.99■■■□□ 2.23
LEMD2-202ENST00000421671 UGGT1Q9NYU2 1555 aa28.99■■■□□ 2.23
LEMD2-202ENST00000421671 PAK3O75914 559 aaPredicted RBP28.99■■■□□ 2.23
LEMD2-202ENST00000421671 POGZQ7Z3K3 1410 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms