RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 CARD11Q9BXL7 1154 aa10.32□□□□□ -0.76
BDNF-209ENST00000420794 A2MP01023 1474 aa10.31□□□□□ -0.76
BDNF-209ENST00000420794 POGZQ7Z3K3 1410 aa10.31□□□□□ -0.76
BDNF-209ENST00000420794 ABCA9Q8IUA7 1624 aa10.31□□□□□ -0.76
BDNF-209ENST00000420794 ABCC1P33527 1531 aa10.31□□□□□ -0.76
BDNF-209ENST00000420794 ATP7AQ04656 1500 aa10.29□□□□□ -0.76
BDNF-209ENST00000420794 STAC3Q96MF2 364 aa10.29□□□□□ -0.76
BDNF-209ENST00000420794 PPP6R1Q9UPN7 881 aa10.29□□□□□ -0.76
BDNF-209ENST00000420794 ANKRD30BQ9BXX2 1392 aa10.28□□□□□ -0.76
BDNF-209ENST00000420794 HIRIP3Q9BW71 556 aaPredicted RBP10.27□□□□□ -0.76
BDNF-209ENST00000420794 ADGBQ8N7X0 1667 aa10.27□□□□□ -0.77
BDNF-209ENST00000420794 CDC42BPBQ9Y5S2 1711 aa10.27□□□□□ -0.77
BDNF-209ENST00000420794 ANP32CO43423 234 aa10.26□□□□□ -0.77
BDNF-209ENST00000420794 ARHGEF12Q9NZN5 1544 aa10.26□□□□□ -0.77
BDNF-209ENST00000420794 GCC2Q8IWJ2 1684 aa10.25□□□□□ -0.77
BDNF-209ENST00000420794 MLH3Q9UHC1 1453 aa10.25□□□□□ -0.77
BDNF-209ENST00000420794 DDX10Q13206 875 aaKnown RBP10.25□□□□□ -0.77
BDNF-209ENST00000420794 SLC52A1Q9NWF4 448 aa10.25□□□□□ -0.77
BDNF-209ENST00000420794 VGFO15240 615 aaPredicted RBP10.24□□□□□ -0.77
BDNF-209ENST00000420794 ROCK2O75116 1388 aaKnown RBP10.24□□□□□ -0.77
BDNF-209ENST00000420794 CNGB1Q14028 1251 aaPredicted RBP10.24□□□□□ -0.77
BDNF-209ENST00000420794 ATP10AO60312 1499 aa10.23□□□□□ -0.77
BDNF-209ENST00000420794 MAGI2Q86UL8 1455 aa10.23□□□□□ -0.77
BDNF-209ENST00000420794 FAM135AQ9P2D6 1515 aa10.23□□□□□ -0.77
BDNF-209ENST00000420794 GLI2P10070 1586 aa10.23□□□□□ -0.77
BDNF-209ENST00000420794 CDCA8Q53HL2 280 aa10.23□□□□□ -0.77
BDNF-209ENST00000420794 SENP3Q9H4L4 574 aaPredicted RBP10.23□□□□□ -0.77
BDNF-209ENST00000420794 MAST1Q9Y2H9 1570 aa10.23□□□□□ -0.77
BDNF-209ENST00000420794 HSPA5P11021 654 aaKnown RBP10.22□□□□□ -0.77
BDNF-209ENST00000420794 TSPOAP1O95153 1857 aa10.21□□□□□ -0.77
BDNF-209ENST00000420794 CENPBP07199 599 aaPredicted RBP10.21□□□□□ -0.77
BDNF-209ENST00000420794 EID1Q9Y6B2 187 aa10.21□□□□□ -0.78
BDNF-209ENST00000420794 PZPP20742 1482 aa10.21□□□□□ -0.78
BDNF-209ENST00000420794 RPRD2Q5VT52 1461 aaKnown RBP10.2□□□□□ -0.78
BDNF-209ENST00000420794 ZFYVE16Q7Z3T8 1539 aa10.2□□□□□ -0.78
BDNF-209ENST00000420794 PLXNC1O60486 1568 aa10.2□□□□□ -0.78
BDNF-209ENST00000420794 HECW2Q9P2P5 1572 aa10.19□□□□□ -0.78
BDNF-209ENST00000420794 DIP2BQ9P265 1576 aa10.19□□□□□ -0.78
BDNF-209ENST00000420794 YEATS2Q9ULM3 1422 aa10.19□□□□□ -0.78
BDNF-209ENST00000420794 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.18□□□□□ -0.78
BDNF-209ENST00000420794 POGKQ9P215 609 aa10.18□□□□□ -0.78
BDNF-209ENST00000420794 TMF1P82094 1093 aa10.18□□□□□ -0.78
BDNF-209ENST00000420794 CROCC2H7BZ55 1655 aa10.18□□□□□ -0.78
BDNF-209ENST00000420794 NUTM2DQ5VT03 806 aaPredicted RBP10.18□□□□□ -0.78
BDNF-209ENST00000420794 YTHDC1Q96MU7 727 aaKnown RBP10.18□□□□□ -0.78
BDNF-209ENST00000420794 RPGRIP1LQ68CZ1 1315 aa10.18□□□□□ -0.78
BDNF-209ENST00000420794 EIF3AQ14152 1382 aaKnown RBP10.17□□□□□ -0.78
BDNF-209ENST00000420794 KDM6BO15054 1643 aa10.16□□□□□ -0.78
BDNF-209ENST00000420794 FBXO31Q5XUX0 539 aaPredicted RBP10.15□□□□□ -0.79
BDNF-209ENST00000420794 IDI1Q13907 227 aa10.14□□□□□ -0.79
BDNF-209ENST00000420794 NBPF8Q3BBV2 869 aa10.14□□□□□ -0.79
BDNF-209ENST00000420794 STK26Q9P289 416 aa10.14□□□□□ -0.79
BDNF-209ENST00000420794 USP47Q96K76 1375 aa10.14□□□□□ -0.79
BDNF-209ENST00000420794 ST20-MTHFSA0A0A6YYL1 179 aa10.13□□□□□ -0.79
BDNF-209ENST00000420794 THEMISQ8N1K5 641 aaPredicted RBP10.13□□□□□ -0.79
BDNF-209ENST00000420794 MAP3K4Q9Y6R4 1608 aa10.12□□□□□ -0.79
BDNF-209ENST00000420794 KDM5DQ9BY66 1539 aa10.12□□□□□ -0.79
BDNF-209ENST00000420794 CNTLNQ9NXG0 1405 aa10.12□□□□□ -0.79
BDNF-209ENST00000420794 TMC1Q8TDI8 760 aa10.12□□□□□ -0.79
BDNF-209ENST00000420794 TRAK1Q9UPV9 953 aa10.11□□□□□ -0.79
BDNF-209ENST00000420794 INO80Q9ULG1 1556 aaPredicted RBP10.11□□□□□ -0.79
BDNF-209ENST00000420794 ZMYM3Q14202 1370 aa10.11□□□□□ -0.79
BDNF-209ENST00000420794 KDM5CP41229 1560 aa10.11□□□□□ -0.79
BDNF-209ENST00000420794 CFAP70Q5T0N1 1121 aa10.11□□□□□ -0.79
BDNF-209ENST00000420794 CEBPAP49715 358 aaPredicted RBP10.1□□□□□ -0.79
BDNF-209ENST00000420794 C14orf37Q86TY3 774 aa10.1□□□□□ -0.79
BDNF-209ENST00000420794 SAFB2Q14151 953 aaKnown RBP eCLIP10.09□□□□□ -0.79
BDNF-209ENST00000420794 TNRQ92752 1358 aa10.09□□□□□ -0.79
BDNF-209ENST00000420794 TXNDC2Q86VQ3 553 aa10.09□□□□□ -0.79
BDNF-209ENST00000420794 NBPF1Q3BBV0 1214 aa10.09□□□□□ -0.79
BDNF-209ENST00000420794 KNSTRNQ9Y448 316 aa10.09□□□□□ -0.79
BDNF-209ENST00000420794 MIER1Q8N108 512 aa10.08□□□□□ -0.8
BDNF-209ENST00000420794 NPATQ14207 1427 aa10.08□□□□□ -0.8
BDNF-209ENST00000420794 UNC13BO14795 1591 aa10.08□□□□□ -0.8
BDNF-209ENST00000420794 EIF2AK4Q9P2K8 1649 aaKnown RBP10.08□□□□□ -0.8
BDNF-209ENST00000420794 SRPK2P78362 688 aaKnown RBP10.08□□□□□ -0.8
BDNF-209ENST00000420794 KIDINS220Q9ULH0 1771 aa10.07□□□□□ -0.8
BDNF-209ENST00000420794 IQGAP3Q86VI3 1631 aa10.07□□□□□ -0.8
BDNF-209ENST00000420794 DIP2CQ9Y2E4 1556 aa10.06□□□□□ -0.8
BDNF-209ENST00000420794 CENPJQ9HC77 1338 aaPredicted RBP10.06□□□□□ -0.8
BDNF-209ENST00000420794 TMEM132EQ6IEE7 984 aa10.06□□□□□ -0.8
BDNF-209ENST00000420794 ADGRF5Q8IZF2 1346 aa10.05□□□□□ -0.8
BDNF-209ENST00000420794 NOS1P29475 1434 aa10.05□□□□□ -0.8
BDNF-209ENST00000420794 ZMYM4Q5VZL5 1548 aa10.04□□□□□ -0.8
BDNF-209ENST00000420794 ANKLE2Q86XL3 938 aa10.04□□□□□ -0.8
BDNF-209ENST00000420794 TET3O43151 1660 aa10.04□□□□□ -0.8
BDNF-209ENST00000420794 PRDM15P57071 1507 aaPredicted RBP10.04□□□□□ -0.8
BDNF-209ENST00000420794 PTPRTO14522 1441 aa10.04□□□□□ -0.8
BDNF-209ENST00000420794 ABCC3O15438 1527 aa10.04□□□□□ -0.8
BDNF-209ENST00000420794 ARHGAP31Q2M1Z3 1444 aa10.04□□□□□ -0.8
BDNF-209ENST00000420794 EVC2Q86UK5 1308 aa10.04□□□□□ -0.8
BDNF-209ENST00000420794 ABCA6Q8N139 1617 aa10.04□□□□□ -0.8
BDNF-209ENST00000420794 COL17A1Q9UMD9 1497 aaPredicted RBP10.03□□□□□ -0.8
BDNF-209ENST00000420794 AGLP35573 1532 aa10.03□□□□□ -0.8
BDNF-209ENST00000420794 EFCAB6Q5THR3 1501 aa10.03□□□□□ -0.8
BDNF-209ENST00000420794 PRAG1Q86YV5 1406 aa10.03□□□□□ -0.8
BDNF-209ENST00000420794 TRPM2O94759 1503 aa10.02□□□□□ -0.8
BDNF-209ENST00000420794 C14orf93Q9H972 538 aaKnown RBP10.02□□□□□ -0.8
BDNF-209ENST00000420794 MRS2Q9HD23 443 aa10.02□□□□□ -0.8
BDNF-209ENST00000420794 CCDC7Q96M83 1385 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms