RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 NPM1P06748 294 aaKnown RBP eCLIP12.22□□□□□ -0.45
SNCA-206ENST00000420646 CCDC144AA2RUR9 1427 aa12.22□□□□□ -0.45
SNCA-206ENST00000420646 SCAPERQ9BY12 1400 aa12.22□□□□□ -0.45
SNCA-206ENST00000420646 KIF3BO15066 747 aa12.21□□□□□ -0.45
SNCA-206ENST00000420646 FANCAO15360 1455 aa12.21□□□□□ -0.45
SNCA-206ENST00000420646 RIMBP3CA6NJZ7 1639 aa12.21□□□□□ -0.45
SNCA-206ENST00000420646 RIMBP3BA6NNM3 1639 aa12.21□□□□□ -0.45
SNCA-206ENST00000420646 RIMBP3Q9UFD9 1639 aa12.21□□□□□ -0.45
SNCA-206ENST00000420646 ABCC1P33527 1531 aa12.21□□□□□ -0.46
SNCA-206ENST00000420646 KDM5DQ9BY66 1539 aa12.21□□□□□ -0.46
SNCA-206ENST00000420646 PRKRIP1Q9H875 184 aaPredicted RBP12.2□□□□□ -0.46
SNCA-206ENST00000420646 CNTLNQ9NXG0 1405 aa12.2□□□□□ -0.46
SNCA-206ENST00000420646 FAM9BQ8IZU0 186 aa12.2□□□□□ -0.46
SNCA-206ENST00000420646 HNRNPUQ00839 825 aaKnown RBP eCLIP12.2□□□□□ -0.46
SNCA-206ENST00000420646 BCANQ96GW7 911 aa12.19□□□□□ -0.46
SNCA-206ENST00000420646 SUPT16HQ9Y5B9 1047 aaKnown RBP12.19□□□□□ -0.46
SNCA-206ENST00000420646 ROCK2O75116 1388 aaKnown RBP12.18□□□□□ -0.46
SNCA-206ENST00000420646 BCORL1Q5H9F3 1711 aa12.17□□□□□ -0.46
SNCA-206ENST00000420646 MAST1Q9Y2H9 1570 aa12.17□□□□□ -0.46
SNCA-206ENST00000420646 DUOX2Q9NRD8 1548 aa12.17□□□□□ -0.46
SNCA-206ENST00000420646 ADGRL1O94910 1474 aa12.16□□□□□ -0.46
SNCA-206ENST00000420646 MRS2Q9HD23 443 aa12.16□□□□□ -0.46
SNCA-206ENST00000420646 RAPGEF3O95398 923 aa12.15□□□□□ -0.46
SNCA-206ENST00000420646 UHRF1BP1Q6BDS2 1440 aa12.15□□□□□ -0.46
SNCA-206ENST00000420646 PLXNC1O60486 1568 aa12.15□□□□□ -0.46
SNCA-206ENST00000420646 AEBP2Q6ZN18 517 aaPredicted RBP12.15□□□□□ -0.47
SNCA-206ENST00000420646 ERBINQ96RT1 1412 aa12.14□□□□□ -0.47
SNCA-206ENST00000420646 A2MP01023 1474 aa12.14□□□□□ -0.47
SNCA-206ENST00000420646 UNC13BO14795 1591 aa12.14□□□□□ -0.47
SNCA-206ENST00000420646 ZFYVE16Q7Z3T8 1539 aa12.13□□□□□ -0.47
SNCA-206ENST00000420646 RALGAPBQ86X10 1494 aa12.13□□□□□ -0.47
SNCA-206ENST00000420646 FKBP8Q14318 412 aa12.13□□□□□ -0.47
SNCA-206ENST00000420646 GGT6Q6P531 493 aa12.13□□□□□ -0.47
SNCA-206ENST00000420646 KDM5CP41229 1560 aa12.12□□□□□ -0.47
SNCA-206ENST00000420646 PRAG1Q86YV5 1406 aa12.12□□□□□ -0.47
SNCA-206ENST00000420646 SENP3Q9H4L4 574 aaPredicted RBP12.12□□□□□ -0.47
SNCA-206ENST00000420646 CD109Q6YHK3 1445 aa12.12□□□□□ -0.47
SNCA-206ENST00000420646 IQGAP3Q86VI3 1631 aa12.11□□□□□ -0.47
SNCA-206ENST00000420646 MYT1Q01538 1121 aa12.11□□□□□ -0.47
SNCA-206ENST00000420646 DHX29Q7Z478 1369 aaKnown RBP12.11□□□□□ -0.47
SNCA-206ENST00000420646 ABCA9Q8IUA7 1624 aa12.1□□□□□ -0.47
SNCA-206ENST00000420646 ATP7AQ04656 1500 aa12.1□□□□□ -0.47
SNCA-206ENST00000420646 IRX6P78412 446 aaPredicted RBP12.09□□□□□ -0.47
SNCA-206ENST00000420646 RTEL1-TNFRSF6BF6WH68 1400 aa12.09□□□□□ -0.47
SNCA-206ENST00000420646 MAGI2Q86UL8 1455 aa12.08□□□□□ -0.48
SNCA-206ENST00000420646 CHGAP10645 457 aaKnown RBP12.08□□□□□ -0.48
SNCA-206ENST00000420646 UGGT1Q9NYU2 1555 aa12.07□□□□□ -0.48
SNCA-206ENST00000420646 ATP10AO60312 1499 aa12.07□□□□□ -0.48
SNCA-206ENST00000420646 E9PCH4 1651 aa12.06□□□□□ -0.48
SNCA-206ENST00000420646 ARAP3Q8WWN8 1544 aa12.06□□□□□ -0.48
SNCA-206ENST00000420646 TESK2Q96S53 571 aa12.06□□□□□ -0.48
SNCA-206ENST00000420646 DISP3Q9P2K9 1392 aa12.06□□□□□ -0.48
SNCA-206ENST00000420646 KANK1Q14678 1352 aa12.05□□□□□ -0.48
SNCA-206ENST00000420646 NUTM2DQ5VT03 806 aaPredicted RBP12.05□□□□□ -0.48
SNCA-206ENST00000420646 FAM69CQ0P6D2 419 aa12.04□□□□□ -0.48
SNCA-206ENST00000420646 INO80Q9ULG1 1556 aaPredicted RBP12.04□□□□□ -0.48
SNCA-206ENST00000420646 CC2D1BQ5T0F9 858 aaKnown RBP12.04□□□□□ -0.48
SNCA-206ENST00000420646 TRPM1Q7Z4N2 1603 aa12.03□□□□□ -0.48
SNCA-206ENST00000420646 CFAP70Q5T0N1 1121 aa12.03□□□□□ -0.48
SNCA-206ENST00000420646 CFAP65Q6ZU64 1925 aaKnown RBP12.03□□□□□ -0.48
SNCA-206ENST00000420646 KIDINS220Q9ULH0 1771 aa12.02□□□□□ -0.48
SNCA-206ENST00000420646 ADGRF5Q8IZF2 1346 aa12.02□□□□□ -0.48
SNCA-206ENST00000420646 ZNF518AQ6AHZ1 1483 aa12.02□□□□□ -0.49
SNCA-206ENST00000420646 TMC1Q8TDI8 760 aa12.02□□□□□ -0.49
SNCA-206ENST00000420646 PANK3Q9H999 370 aa12.01□□□□□ -0.49
SNCA-206ENST00000420646 WASHC2CQ9Y4E1 1318 aa12.01□□□□□ -0.49
SNCA-206ENST00000420646 SALL2Q9Y467 1007 aaPredicted RBP12.01□□□□□ -0.49
SNCA-206ENST00000420646 POLR1AO95602 1720 aaPredicted RBP12□□□□□ -0.49
SNCA-206ENST00000420646 ARID4BQ4LE39 1312 aaPredicted RBP12□□□□□ -0.49
SNCA-206ENST00000420646 CLTCL1P53675 1640 aa12□□□□□ -0.49
SNCA-206ENST00000420646 GPRASP1Q5JY77 1395 aa12□□□□□ -0.49
SNCA-206ENST00000420646 PTPRTO14522 1441 aa12□□□□□ -0.49
SNCA-206ENST00000420646 POGZQ7Z3K3 1410 aa12□□□□□ -0.49
SNCA-206ENST00000420646 MROH1Q8NDA8 1641 aa11.99□□□□□ -0.49
SNCA-206ENST00000420646 PER1O15534 1290 aaPredicted RBP11.99□□□□□ -0.49
SNCA-206ENST00000420646 NEFLP07196 543 aa11.99□□□□□ -0.49
SNCA-206ENST00000420646 PRDM15P57071 1507 aaPredicted RBP11.98□□□□□ -0.49
SNCA-206ENST00000420646 TRPM2O94759 1503 aa11.98□□□□□ -0.49
SNCA-206ENST00000420646 DEPDC5O75140 1603 aa11.98□□□□□ -0.49
SNCA-206ENST00000420646 TMF1P82094 1093 aa11.97□□□□□ -0.49
SNCA-206ENST00000420646 PNISRQ8TF01 805 aaKnown RBP11.97□□□□□ -0.49
SNCA-206ENST00000420646 TMEM132EQ6IEE7 984 aa11.97□□□□□ -0.49
SNCA-206ENST00000420646 SPHKAPQ2M3C7 1700 aa11.96□□□□□ -0.49
SNCA-206ENST00000420646 YEATS2Q9ULM3 1422 aa11.96□□□□□ -0.49
SNCA-206ENST00000420646 NPATQ14207 1427 aa11.96□□□□□ -0.5
SNCA-206ENST00000420646 TET3O43151 1660 aa11.95□□□□□ -0.5
SNCA-206ENST00000420646 FRMPD1Q5SYB0 1578 aa11.95□□□□□ -0.5
SNCA-206ENST00000420646 VWDEQ8N2E2 1590 aa11.95□□□□□ -0.5
SNCA-206ENST00000420646 PPRC1Q5VV67 1664 aaKnown RBP11.94□□□□□ -0.5
SNCA-206ENST00000420646 COL17A1Q9UMD9 1497 aaPredicted RBP11.93□□□□□ -0.5
SNCA-206ENST00000420646 TRAK1Q9UPV9 953 aa11.93□□□□□ -0.5
SNCA-206ENST00000420646 CEP152O94986 1710 aa11.93□□□□□ -0.5
SNCA-206ENST00000420646 ZBED9Q6R2W3 1325 aa11.93□□□□□ -0.5
SNCA-206ENST00000420646 MYBBP1AQ9BQG0 1328 aaKnown RBP11.93□□□□□ -0.5
SNCA-206ENST00000420646 MLH3Q9UHC1 1453 aa11.93□□□□□ -0.5
SNCA-206ENST00000420646 MADDQ8WXG6 1647 aa11.93□□□□□ -0.5
SNCA-206ENST00000420646 MLECQ14165 292 aa11.93□□□□□ -0.5
SNCA-206ENST00000420646 NOS1P29475 1434 aa11.92□□□□□ -0.5
SNCA-206ENST00000420646 ABCA6Q8N139 1617 aa11.92□□□□□ -0.5
SNCA-206ENST00000420646 EFCAB6Q5THR3 1501 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms