RNA–Protein interactions for RNA: ENST00000420536.1

RPL3-204, Transcript of ribosomal protein L3, humanhuman

TSL 5

Gene RPL3, Length 711 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-204ENST00000420536 TCOF1Q13428 1488 aaKnown RBP14.17□□□□□ -0.14
RPL3-204ENST00000420536 SHANK2Q9UPX8 1470 aa14.17□□□□□ -0.14
RPL3-204ENST00000420536 PTPN23Q9H3S7 1636 aa14.16□□□□□ -0.14
RPL3-204ENST00000420536 ANKRD30AQ9BXX3 1397 aa14.16□□□□□ -0.14
RPL3-204ENST00000420536 KIF15Q9NS87 1388 aa14.16□□□□□ -0.14
RPL3-204ENST00000420536 DAPK1P53355 1430 aa14.15□□□□□ -0.14
RPL3-204ENST00000420536 KDM5DQ9BY66 1539 aa14.15□□□□□ -0.14
RPL3-204ENST00000420536 CLTCQ00610 1675 aaKnown RBP14.15□□□□□ -0.14
RPL3-204ENST00000420536 FBXO41Q8TF61 875 aa14.15□□□□□ -0.14
RPL3-204ENST00000420536 CHIC2Q9UKJ5 165 aa14.15□□□□□ -0.14
RPL3-204ENST00000420536 DUOX2Q9NRD8 1548 aa14.15□□□□□ -0.14
RPL3-204ENST00000420536 TNRQ92752 1358 aa14.13□□□□□ -0.15
RPL3-204ENST00000420536 PKD2Q13563 968 aa14.13□□□□□ -0.15
RPL3-204ENST00000420536 FBXO31Q5XUX0 539 aaPredicted RBP14.13□□□□□ -0.15
RPL3-204ENST00000420536 PTPRTO14522 1441 aa14.13□□□□□ -0.15
RPL3-204ENST00000420536 PZPP20742 1482 aa14.12□□□□□ -0.15
RPL3-204ENST00000420536 ERBINQ96RT1 1412 aa14.12□□□□□ -0.15
RPL3-204ENST00000420536 KANK1Q14678 1352 aa14.11□□□□□ -0.15
RPL3-204ENST00000420536 NCOA1Q15788 1441 aa14.11□□□□□ -0.15
RPL3-204ENST00000420536 CERKQ8TCT0 537 aa14.11□□□□□ -0.15
RPL3-204ENST00000420536 THEMISQ8N1K5 641 aaPredicted RBP14.1□□□□□ -0.15
RPL3-204ENST00000420536 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.1□□□□□ -0.154e-7■□□□□ 8.9
RPL3-204ENST00000420536 DNMT1P26358 1616 aaKnown RBP14.09□□□□□ -0.15
RPL3-204ENST00000420536 EIF2AK4Q9P2K8 1649 aaKnown RBP14.09□□□□□ -0.15
RPL3-204ENST00000420536 A2ML1A8K2U0 1454 aa14.09□□□□□ -0.15
RPL3-204ENST00000420536 NCKAP5LQ9HCH0 1330 aa14.08□□□□□ -0.16
RPL3-204ENST00000420536 CAMSAP1Q5T5Y3 1602 aa14.08□□□□□ -0.16
RPL3-204ENST00000420536 RNF17Q9BXT8 1623 aaKnown RBP14.08□□□□□ -0.16
RPL3-204ENST00000420536 PLA2R1Q13018 1463 aa14.07□□□□□ -0.16
RPL3-204ENST00000420536 CEP170BQ9Y4F5 1589 aaPredicted RBP14.07□□□□□ -0.16
RPL3-204ENST00000420536 NLRP1Q9C000 1473 aa14.06□□□□□ -0.16
RPL3-204ENST00000420536 ABCC3O15438 1527 aa14.06□□□□□ -0.16
RPL3-204ENST00000420536 ANKLE2Q86XL3 938 aa14.06□□□□□ -0.16
RPL3-204ENST00000420536 ADGRL2O95490 1459 aa14.05□□□□□ -0.16
RPL3-204ENST00000420536 MYO3AQ8NEV4 1616 aa14.04□□□□□ -0.16
RPL3-204ENST00000420536 PPARGC1BQ86YN6 1023 aaKnown RBP14.04□□□□□ -0.16
RPL3-204ENST00000420536 CROCC2H7BZ55 1655 aa14.04□□□□□ -0.16
RPL3-204ENST00000420536 STRCQ7RTU9 1775 aa14.04□□□□□ -0.16
RPL3-204ENST00000420536 ARHGAP31Q2M1Z3 1444 aa14.03□□□□□ -0.16
RPL3-204ENST00000420536 ZC3H13Q5T200 1668 aaKnown RBP14.03□□□□□ -0.16
RPL3-204ENST00000420536 ZNF142P52746 1687 aaPredicted RBP14.02□□□□□ -0.16
RPL3-204ENST00000420536 ANKRD50Q9ULJ7 1429 aa14.02□□□□□ -0.16
RPL3-204ENST00000420536 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.02□□□□□ -0.17
RPL3-204ENST00000420536 PRDM15P57071 1507 aaPredicted RBP14.01□□□□□ -0.17
RPL3-204ENST00000420536 ERVK-7P63135 1459 aa14.01□□□□□ -0.17
RPL3-204ENST00000420536 ROCK1Q13464 1354 aa14□□□□□ -0.17
RPL3-204ENST00000420536 ITGAEP38570 1179 aa14□□□□□ -0.17
RPL3-204ENST00000420536 STAG3Q9UJ98 1225 aa14□□□□□ -0.17
RPL3-204ENST00000420536 MROH1Q8NDA8 1641 aa14□□□□□ -0.17
RPL3-204ENST00000420536 UGGT1Q9NYU2 1555 aa14□□□□□ -0.17
RPL3-204ENST00000420536 SPATA31D1Q6ZQQ2 1576 aa13.99□□□□□ -0.17
RPL3-204ENST00000420536 ZNF335Q9H4Z2 1342 aaPredicted RBP13.96□□□□□ -0.17
RPL3-204ENST00000420536 LMTK2Q8IWU2 1503 aa13.96□□□□□ -0.17
RPL3-204ENST00000420536 EID1Q9Y6B2 187 aa13.96□□□□□ -0.17
RPL3-204ENST00000420536 SLC52A1Q9NWF4 448 aa13.95□□□□□ -0.18
RPL3-204ENST00000420536 DEPDC5O75140 1603 aa13.94□□□□□ -0.18
RPL3-204ENST00000420536 IQSEC2Q5JU85 1478 aa13.93□□□□□ -0.18
RPL3-204ENST00000420536 NPHP4O75161 1426 aaPredicted RBP13.93□□□□□ -0.18
RPL3-204ENST00000420536 TXNDC2Q86VQ3 553 aa13.93□□□□□ -0.18
RPL3-204ENST00000420536 CEP152O94986 1710 aa13.93□□□□□ -0.18
RPL3-204ENST00000420536 VWDEQ8N2E2 1590 aa13.92□□□□□ -0.18
RPL3-204ENST00000420536 IDI1Q13907 227 aa13.92□□□□□ -0.18
RPL3-204ENST00000420536 LTBP4Q8N2S1 1624 aa13.92□□□□□ -0.18
RPL3-204ENST00000420536 MED14O60244 1454 aa13.92□□□□□ -0.18
RPL3-204ENST00000420536 RPRD2Q5VT52 1461 aaKnown RBP13.91□□□□□ -0.18
RPL3-204ENST00000420536 RRBP1Q9P2E9 1410 aaKnown RBP13.9□□□□□ -0.18
RPL3-204ENST00000420536 HDGFP51858 240 aaKnown RBP13.9□□□□□ -0.18
RPL3-204ENST00000420536 NUP155O75694 1391 aa13.9□□□□□ -0.18
RPL3-204ENST00000420536 NOS1P29475 1434 aa13.9□□□□□ -0.19
RPL3-204ENST00000420536 EFCAB6Q5THR3 1501 aa13.89□□□□□ -0.19
RPL3-204ENST00000420536 SCAF11Q99590 1463 aaKnown RBP13.88□□□□□ -0.19
RPL3-204ENST00000420536 TMEM2Q9UHN6 1383 aa13.88□□□□□ -0.19
RPL3-204ENST00000420536 UBAP1LF5GYI3 381 aa13.87□□□□□ -0.19
RPL3-204ENST00000420536 LTKP29376 864 aa13.87□□□□□ -0.19
RPL3-204ENST00000420536 NEURL4Q96JN8 1562 aa13.87□□□□□ -0.19
RPL3-204ENST00000420536 ARHGAP23Q9P227 1491 aa13.87□□□□□ -0.19
RPL3-204ENST00000420536 CPS1P31327 1500 aa13.86□□□□□ -0.19
RPL3-204ENST00000420536 SLIT1O75093 1534 aa13.85□□□□□ -0.19
RPL3-204ENST00000420536 POLR1AO95602 1720 aaPredicted RBP13.85□□□□□ -0.19
RPL3-204ENST00000420536 CFAP65Q6ZU64 1925 aaKnown RBP13.84□□□□□ -0.19
RPL3-204ENST00000420536 TOM1O60784 492 aa13.84□□□□□ -0.19
RPL3-204ENST00000420536 CHGAP10645 457 aaKnown RBP13.84□□□□□ -0.19
RPL3-204ENST00000420536 BCANQ96GW7 911 aa13.84□□□□□ -0.19
RPL3-204ENST00000420536 UNC13BO14795 1591 aa13.83□□□□□ -0.19
RPL3-204ENST00000420536 PPP1R15AO75807 674 aaPredicted RBP13.83□□□□□ -0.2
RPL3-204ENST00000420536 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.83□□□□□ -0.2
RPL3-204ENST00000420536 UBR1Q8IWV7 1749 aa13.83□□□□□ -0.2
RPL3-204ENST00000420536 TET3O43151 1660 aa13.82□□□□□ -0.2
RPL3-204ENST00000420536 PIK3C2BO00750 1634 aa13.82□□□□□ -0.2
RPL3-204ENST00000420536 SYNMO15061 1565 aa13.81□□□□□ -0.2
RPL3-204ENST00000420536 TRIM52Q96A61 297 aa13.81□□□□□ -0.2
RPL3-204ENST00000420536 IQGAP1P46940 1657 aa13.81□□□□□ -0.2
RPL3-204ENST00000420536 NAIPQ13075 1403 aa13.8□□□□□ -0.2
RPL3-204ENST00000420536 ADGRB3O60242 1522 aa13.8□□□□□ -0.2
RPL3-204ENST00000420536 KDM5AP29375 1690 aaKnown RBP13.79□□□□□ -0.2
RPL3-204ENST00000420536 SCAF1Q9H7N4 1312 aaKnown RBP13.79□□□□□ -0.2
RPL3-204ENST00000420536 IQGAP3Q86VI3 1631 aa13.79□□□□□ -0.2
RPL3-204ENST00000420536 SLC26A8Q96RN1 970 aa13.78□□□□□ -0.2
RPL3-204ENST00000420536 HFM1A2PYH4 1435 aa13.78□□□□□ -0.2
RPL3-204ENST00000420536 KCNA6P17658 529 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms