RNA–Protein interactions for RNA: ENST00000420522.1

LINC01646-201, Transcript of long intergenic non-protein coding RNA 1646, humanhuman

TSL 3 BASIC

Gene LINC01646, Length 682 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01646-201ENST00000420522 TSR1Q2NL82 804 aaKnown RBP9.04□□□□□ -0.96
LINC01646-201ENST00000420522 ZNF710Q8N1W2 664 aa9.04□□□□□ -0.96
LINC01646-201ENST00000420522 GPBP1L1Q9HC44 474 aaPredicted RBP9.03□□□□□ -0.96
LINC01646-201ENST00000420522 ZNF454Q8N9F8 522 aa9.02□□□□□ -0.97
LINC01646-201ENST00000420522 ZDHHC16Q969W1 377 aa9.02□□□□□ -0.97
LINC01646-201ENST00000420522 SNPHO15079 494 aa9.01□□□□□ -0.97
LINC01646-201ENST00000420522 AMHR2Q16671 573 aa9.01□□□□□ -0.97
LINC01646-201ENST00000420522 KDM4CQ9H3R0 1056 aa9□□□□□ -0.97
LINC01646-201ENST00000420522 C6orf132Q5T0Z8 1188 aa8.99□□□□□ -0.97
LINC01646-201ENST00000420522 OTUD5Q96G74 571 aa8.99□□□□□ -0.97
LINC01646-201ENST00000420522 LHX6Q9UPM6 363 aa8.99□□□□□ -0.97
LINC01646-201ENST00000420522 GTF3C3Q9Y5Q9 886 aa8.99□□□□□ -0.97
LINC01646-201ENST00000420522 CERKQ8TCT0 537 aa8.98□□□□□ -0.97
LINC01646-201ENST00000420522 ADAM33Q9BZ11 813 aa8.98□□□□□ -0.97
LINC01646-201ENST00000420522 PSDA5PKW4 1024 aaPredicted RBP8.96□□□□□ -0.98
LINC01646-201ENST00000420522 HOXB1P14653 301 aaPredicted RBP8.96□□□□□ -0.98
LINC01646-201ENST00000420522 DAXXQ9UER7 740 aaPredicted RBP8.96□□□□□ -0.98
LINC01646-201ENST00000420522 PARP9Q8IXQ6 854 aa8.95□□□□□ -0.98
LINC01646-201ENST00000420522 PPP4R3BQ5MIZ7 849 aa8.94□□□□□ -0.98
LINC01646-201ENST00000420522 TTC13Q8NBP0 860 aa8.93□□□□□ -0.98
LINC01646-201ENST00000420522 IL27Q8NEV9 243 aa8.93□□□□□ -0.98
LINC01646-201ENST00000420522 BCL2L12Q9HB09 334 aa8.93□□□□□ -0.98
LINC01646-201ENST00000420522 RBM27Q9P2N5 1060 aaKnown RBP8.93□□□□□ -0.98
LINC01646-201ENST00000420522 PADI6Q6TGC4 694 aa8.92□□□□□ -0.98
LINC01646-201ENST00000420522 PRSS12P56730 875 aa8.91□□□□□ -0.98
LINC01646-201ENST00000420522 TTLL12Q14166 644 aaPredicted RBP8.91□□□□□ -0.98
LINC01646-201ENST00000420522 LHX8Q68G74 356 aa8.91□□□□□ -0.98
LINC01646-201ENST00000420522 PHOX2BQ99453 314 aa8.91□□□□□ -0.98
LINC01646-201ENST00000420522 OATP04181 439 aa8.9□□□□□ -0.98
LINC01646-201ENST00000420522 COL9A1P20849 921 aa8.9□□□□□ -0.98
LINC01646-201ENST00000420522 FAM117AQ9C073 453 aa8.9□□□□□ -0.98
LINC01646-201ENST00000420522 ADGRG1Q9Y653 693 aa8.9□□□□□ -0.98
LINC01646-201ENST00000420522 FAM161AQ3B820 660 aa8.89□□□□□ -0.99
LINC01646-201ENST00000420522 METTL3Q86U44 580 aaKnown RBP8.89□□□□□ -0.99
LINC01646-201ENST00000420522 CDCA7LQ96GN5 454 aa8.89□□□□□ -0.99
LINC01646-201ENST00000420522 TMUB1Q9BVT8 246 aa8.89□□□□□ -0.99
LINC01646-201ENST00000420522 PTPREP23469 700 aa8.88□□□□□ -0.99
LINC01646-201ENST00000420522 DDRGK1Q96HY6 314 aa8.88□□□□□ -0.99
LINC01646-201ENST00000420522 REPIN1Q9BWE0 567 aaKnown RBP8.88□□□□□ -0.99
LINC01646-201ENST00000420522 PPP1R3GB7ZBB8 358 aa8.87□□□□□ -0.99
LINC01646-201ENST00000420522 CLCN1P35523 988 aa8.87□□□□□ -0.99
LINC01646-201ENST00000420522 GIGYF2Q6Y7W6 1299 aaKnown RBP8.87□□□□□ -0.99
LINC01646-201ENST00000420522 PXYLP1Q8TE99 480 aa8.87□□□□□ -0.99
LINC01646-201ENST00000420522 PLEKHG3A1L390 1219 aa8.86□□□□□ -0.99
LINC01646-201ENST00000420522 GPCPD1Q9NPB8 672 aa8.86□□□□□ -0.99
LINC01646-201ENST00000420522 MS4A1P11836 297 aa8.85□□□□□ -0.99
LINC01646-201ENST00000420522 MDM2Q00987 491 aaPredicted RBP8.85□□□□□ -0.99
LINC01646-201ENST00000420522 FAM198AQ9UFP1 575 aa8.85□□□□□ -0.99
LINC01646-201ENST00000420522 RBM46Q8TBY0 533 aaKnown RBP8.83□□□□□ -1
LINC01646-201ENST00000420522 TSKSQ9UJT2 592 aa8.83□□□□□ -1
LINC01646-201ENST00000420522 TIMELESSQ9UNS1 1208 aa8.82□□□□□ -1
LINC01646-201ENST00000420522 TRIM6-TRIM34B2RNG4 842 aa8.81□□□□□ -1
LINC01646-201ENST00000420522 ERICH6Q7L0X2 663 aa8.81□□□□□ -1
LINC01646-201ENST00000420522 NLRP7Q8WX94 980 aa8.81□□□□□ -1
LINC01646-201ENST00000420522 KCNK17Q96T54 332 aa8.81□□□□□ -1
LINC01646-201ENST00000420522 EYA1Q99502 592 aa8.81□□□□□ -1
LINC01646-201ENST00000420522 ST18O60284 1047 aa8.8□□□□□ -1
LINC01646-201ENST00000420522 SSTR3P32745 418 aaPredicted RBP8.8□□□□□ -1
LINC01646-201ENST00000420522 FAM217BQ9NTX9 383 aaPredicted RBP8.8□□□□□ -1
LINC01646-201ENST00000420522 ERBB3P21860 1342 aa8.8□□□□□ -1
LINC01646-201ENST00000420522 ONECUT3O60422 494 aaPredicted RBP8.79□□□□□ -1
LINC01646-201ENST00000420522 PACS2Q86VP3 889 aa8.79□□□□□ -1
LINC01646-201ENST00000420522 GOPCQ9HD26 462 aa8.79□□□□□ -1
LINC01646-201ENST00000420522 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.78□□□□□ -1
LINC01646-201ENST00000420522 C3orf80F5H4A9 247 aa8.78□□□□□ -1
LINC01646-201ENST00000420522 VARS2Q5ST30 1063 aaKnown RBP8.78□□□□□ -1
LINC01646-201ENST00000420522 NUDT18Q6ZVK8 323 aa8.78□□□□□ -1
LINC01646-201ENST00000420522 TATDN2Q93075 761 aa8.78□□□□□ -1
LINC01646-201ENST00000420522 KCNH8Q96L42 1107 aa8.78□□□□□ -1
LINC01646-201ENST00000420522 RCCD1A6NED2 376 aa8.77□□□□□ -1.01
LINC01646-201ENST00000420522 NBPF26B4DH59 902 aa8.77□□□□□ -1.01
LINC01646-201ENST00000420522 PROX2Q3B8N5 592 aa8.77□□□□□ -1.01
LINC01646-201ENST00000420522 PSEN2P49810 448 aa8.76□□□□□ -1.01
LINC01646-201ENST00000420522 ZBED2Q9BTP6 218 aa8.76□□□□□ -1.01
LINC01646-201ENST00000420522 ARHGAP33O14559 1287 aa8.75□□□□□ -1.01
LINC01646-201ENST00000420522 EMP3P54852 163 aa8.75□□□□□ -1.01
LINC01646-201ENST00000420522 POTEEQ6S8J3 1075 aa8.75□□□□□ -1.01
LINC01646-201ENST00000420522 MARVELD3Q96A59 401 aa8.75□□□□□ -1.01
LINC01646-201ENST00000420522 BEGAINQ9BUH8 593 aa8.75□□□□□ -1.01
LINC01646-201ENST00000420522 PNMA3Q9UL41 463 aa8.75□□□□□ -1.01
LINC01646-201ENST00000420522 DNAJB2P25686 324 aa8.74□□□□□ -1.01
LINC01646-201ENST00000420522 PBX2P40425 430 aa8.73□□□□□ -1.01
LINC01646-201ENST00000420522 C14orf37Q86TY3 774 aa8.73□□□□□ -1.01
LINC01646-201ENST00000420522 SLC4A5Q9BY07 1137 aa8.73□□□□□ -1.01
LINC01646-201ENST00000420522 KIAA1468Q9P260 1216 aa8.73□□□□□ -1.01
LINC01646-201ENST00000420522 SH3D19Q5HYK7 790 aa8.72□□□□□ -1.01
LINC01646-201ENST00000420522 ZNF687Q8N1G0 1237 aa8.72□□□□□ -1.01
LINC01646-201ENST00000420522 RSPH6AQ9H0K4 717 aa8.72□□□□□ -1.01
LINC01646-201ENST00000420522 TMEM134Q9H6X4 195 aa8.72□□□□□ -1.01
LINC01646-201ENST00000420522 SMAPO00193 183 aa8.71□□□□□ -1.02
LINC01646-201ENST00000420522 DMRTA1Q5VZB9 504 aa8.71□□□□□ -1.02
LINC01646-201ENST00000420522 RABGEF1Q9UJ41 708 aa8.71□□□□□ -1.02
LINC01646-201ENST00000420522 AXIN2Q9Y2T1 843 aa8.71□□□□□ -1.02
LINC01646-201ENST00000420522 FAM205CA6NFA0 338 aa8.7□□□□□ -1.02
LINC01646-201ENST00000420522 SKIV2LQ15477 1246 aaKnown RBP8.7□□□□□ -1.02
LINC01646-201ENST00000420522 FAM163AQ96GL9 167 aaPredicted RBP8.7□□□□□ -1.02
LINC01646-201ENST00000420522 PCMTD1Q96MG8 357 aaPredicted RBP8.7□□□□□ -1.02
LINC01646-201ENST00000420522 SULF1Q8IWU6 871 aa8.69□□□□□ -1.02
LINC01646-201ENST00000420522 CD46P15529 392 aa8.68□□□□□ -1.02
LINC01646-201ENST00000420522 VPS9D1Q9Y2B5 631 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms