RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 KIF13AQ9H1H9 1805 aa19.38■□□□□ 0.69
TMEM50B-201ENST00000420455 TEX14Q8IWB6 1497 aa19.37■□□□□ 0.69
TMEM50B-201ENST00000420455 TONSLQ96HA7 1378 aa19.37■□□□□ 0.69
TMEM50B-201ENST00000420455 MROH1Q8NDA8 1641 aa19.36■□□□□ 0.69
TMEM50B-201ENST00000420455 DHX29Q7Z478 1369 aaKnown RBP19.36■□□□□ 0.69
TMEM50B-201ENST00000420455 FRMPD1Q5SYB0 1578 aa19.36■□□□□ 0.69
TMEM50B-201ENST00000420455 PRDM15P57071 1507 aaPredicted RBP19.35■□□□□ 0.69
TMEM50B-201ENST00000420455 RNF17Q9BXT8 1623 aaKnown RBP19.35■□□□□ 0.69
TMEM50B-201ENST00000420455 ATP10AO60312 1499 aa19.35■□□□□ 0.69
TMEM50B-201ENST00000420455 FOXD1Q16676 465 aa19.35■□□□□ 0.69
TMEM50B-201ENST00000420455 PKD2Q13563 968 aa19.34■□□□□ 0.69
TMEM50B-201ENST00000420455 ABCA6Q8N139 1617 aa19.34■□□□□ 0.69
TMEM50B-201ENST00000420455 ZMYM4Q5VZL5 1548 aa19.34■□□□□ 0.69
TMEM50B-201ENST00000420455 TET3O43151 1660 aa19.3■□□□□ 0.68
TMEM50B-201ENST00000420455 DIP2CQ9Y2E4 1556 aa19.29■□□□□ 0.68
TMEM50B-201ENST00000420455 A2MP01023 1474 aa19.29■□□□□ 0.68
TMEM50B-201ENST00000420455 PLA2R1Q13018 1463 aa19.29■□□□□ 0.68
TMEM50B-201ENST00000420455 LMTK2Q8IWU2 1503 aa19.28■□□□□ 0.68
TMEM50B-201ENST00000420455 E9PCH4 1651 aa19.28■□□□□ 0.68
TMEM50B-201ENST00000420455 FAM69CQ0P6D2 419 aa19.28■□□□□ 0.68
TMEM50B-201ENST00000420455 L3MBTL2Q969R5 705 aa19.23■□□□□ 0.67
TMEM50B-201ENST00000420455 TSPOAP1O95153 1857 aa19.23■□□□□ 0.67
TMEM50B-201ENST00000420455 REREQ9P2R6 1566 aa19.23■□□□□ 0.67
TMEM50B-201ENST00000420455 PTPRTO14522 1441 aa19.23■□□□□ 0.67
TMEM50B-201ENST00000420455 SPHKAPQ2M3C7 1700 aa19.21■□□□□ 0.67
TMEM50B-201ENST00000420455 TRPM2O94759 1503 aa19.21■□□□□ 0.67
TMEM50B-201ENST00000420455 UHRF1BP1Q6BDS2 1440 aa19.21■□□□□ 0.67
TMEM50B-201ENST00000420455 NEURL4Q96JN8 1562 aa19.2■□□□□ 0.66
TMEM50B-201ENST00000420455 EFCAB6Q5THR3 1501 aa19.19■□□□□ 0.66
TMEM50B-201ENST00000420455 RAPGEF3O95398 923 aa19.19■□□□□ 0.66
TMEM50B-201ENST00000420455 KANK1Q14678 1352 aa19.18■□□□□ 0.66
TMEM50B-201ENST00000420455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.16■□□□□ 0.66
TMEM50B-201ENST00000420455 CEP152O94986 1710 aa19.16■□□□□ 0.66
TMEM50B-201ENST00000420455 ZC3H13Q5T200 1668 aaKnown RBP19.15■□□□□ 0.66
TMEM50B-201ENST00000420455 CCDC144AA2RUR9 1427 aa19.15■□□□□ 0.66
TMEM50B-201ENST00000420455 KIF3BO15066 747 aa19.15■□□□□ 0.66
TMEM50B-201ENST00000420455 YEATS2Q9ULM3 1422 aa19.15■□□□□ 0.66
TMEM50B-201ENST00000420455 AGLP35573 1532 aa19.13■□□□□ 0.65
TMEM50B-201ENST00000420455 ABCC3O15438 1527 aa19.12■□□□□ 0.65
TMEM50B-201ENST00000420455 NBPF8Q3BBV2 869 aa19.11■□□□□ 0.65
TMEM50B-201ENST00000420455 CLTCL1P53675 1640 aa19.11■□□□□ 0.65
TMEM50B-201ENST00000420455 SPATA31E1Q6ZUB1 1445 aa19.11■□□□□ 0.65
TMEM50B-201ENST00000420455 COL17A1Q9UMD9 1497 aaPredicted RBP19.11■□□□□ 0.65
TMEM50B-201ENST00000420455 CAMSAP1Q5T5Y3 1602 aa19.1■□□□□ 0.65
TMEM50B-201ENST00000420455 MIER1Q8N108 512 aa19.09■□□□□ 0.65
TMEM50B-201ENST00000420455 MYT1LQ9UL68 1186 aa19.09■□□□□ 0.65
TMEM50B-201ENST00000420455 ARHGEF40Q8TER5 1519 aa19.09■□□□□ 0.65
TMEM50B-201ENST00000420455 RALGAPBQ86X10 1494 aa19.08■□□□□ 0.65
TMEM50B-201ENST00000420455 ARHGAP31Q2M1Z3 1444 aa19.07■□□□□ 0.64
TMEM50B-201ENST00000420455 SIGLEC1Q9BZZ2 1709 aa19.06■□□□□ 0.64
TMEM50B-201ENST00000420455 TRPM1Q7Z4N2 1603 aa19.05■□□□□ 0.64
TMEM50B-201ENST00000420455 LAMC1P11047 1609 aa19.04■□□□□ 0.64
TMEM50B-201ENST00000420455 NPATQ14207 1427 aa19.04■□□□□ 0.64
TMEM50B-201ENST00000420455 PRAG1Q86YV5 1406 aa19.03■□□□□ 0.64
TMEM50B-201ENST00000420455 POLR1AO95602 1720 aaPredicted RBP19.03■□□□□ 0.64
TMEM50B-201ENST00000420455 PIK3C2BO00750 1634 aa19.02■□□□□ 0.64
TMEM50B-201ENST00000420455 IFT172Q9UG01 1749 aa19.01■□□□□ 0.63
TMEM50B-201ENST00000420455 NOS1P29475 1434 aa19.01■□□□□ 0.63
TMEM50B-201ENST00000420455 CNTLNQ9NXG0 1405 aa19.01■□□□□ 0.63
TMEM50B-201ENST00000420455 KIF1BO60333 1816 aa19■□□□□ 0.63
TMEM50B-201ENST00000420455 ADGRB3O60242 1522 aa18.98■□□□□ 0.63
TMEM50B-201ENST00000420455 MADDQ8WXG6 1647 aa18.98■□□□□ 0.63
TMEM50B-201ENST00000420455 STAC3Q96MF2 364 aa18.98■□□□□ 0.63
TMEM50B-201ENST00000420455 PPP6R1Q9UPN7 881 aa18.98■□□□□ 0.63
TMEM50B-201ENST00000420455 GPRASP1Q5JY77 1395 aa18.97■□□□□ 0.63
TMEM50B-201ENST00000420455 EIF4G2P78344 907 aaKnown RBP eCLIP18.97■□□□□ 0.63
TMEM50B-201ENST00000420455 MROH2AA6NES4 1674 aa18.97■□□□□ 0.63
TMEM50B-201ENST00000420455 HSPA5P11021 654 aaKnown RBP18.97■□□□□ 0.63
TMEM50B-201ENST00000420455 SYNMO15061 1565 aa18.96■□□□□ 0.63
TMEM50B-201ENST00000420455 UGGT1Q9NYU2 1555 aa18.96■□□□□ 0.63
TMEM50B-201ENST00000420455 DCAF11Q8TEB1 546 aa18.95■□□□□ 0.62
TMEM50B-201ENST00000420455 GGT6Q6P531 493 aa18.95■□□□□ 0.62
TMEM50B-201ENST00000420455 KIAA1210Q9ULL0 1709 aa18.95■□□□□ 0.62
TMEM50B-201ENST00000420455 DNAJC5Q9H3Z4 198 aa18.94■□□□□ 0.62
TMEM50B-201ENST00000420455 PREX1Q8TCU6 1659 aa18.94■□□□□ 0.62
TMEM50B-201ENST00000420455 WASHC2CQ9Y4E1 1318 aa18.94■□□□□ 0.62
TMEM50B-201ENST00000420455 MYOM2P54296 1465 aa18.94■□□□□ 0.62
TMEM50B-201ENST00000420455 NRXN1Q9ULB1 1477 aa18.92■□□□□ 0.62
TMEM50B-201ENST00000420455 HIRIP3Q9BW71 556 aaPredicted RBP18.92■□□□□ 0.62
TMEM50B-201ENST00000420455 PPLO60437 1756 aa18.89■□□□□ 0.61
TMEM50B-201ENST00000420455 CLTCQ00610 1675 aaKnown RBP18.89■□□□□ 0.61
TMEM50B-201ENST00000420455 USP47Q96K76 1375 aa18.89■□□□□ 0.61
TMEM50B-201ENST00000420455 RGL3Q3MIN7 710 aa18.87■□□□□ 0.61
TMEM50B-201ENST00000420455 KDM2AQ9Y2K7 1162 aa18.86■□□□□ 0.61
TMEM50B-201ENST00000420455 WASHC2AQ641Q2 1341 aa18.86■□□□□ 0.61
TMEM50B-201ENST00000420455 IQGAP1P46940 1657 aa18.86■□□□□ 0.61
TMEM50B-201ENST00000420455 SPATA31D1Q6ZQQ2 1576 aa18.85■□□□□ 0.61
TMEM50B-201ENST00000420455 ERVK-7P63135 1459 aa18.84■□□□□ 0.61
TMEM50B-201ENST00000420455 ROCK2O75116 1388 aaKnown RBP18.84■□□□□ 0.61
TMEM50B-201ENST00000420455 CFAP65Q6ZU64 1925 aaKnown RBP18.84■□□□□ 0.61
TMEM50B-201ENST00000420455 CCDC7Q96M83 1385 aa18.83■□□□□ 0.61
TMEM50B-201ENST00000420455 ARID4BQ4LE39 1312 aaPredicted RBP18.83■□□□□ 0.6
TMEM50B-201ENST00000420455 TMEM131LA2VDJ0 1609 aa18.83■□□□□ 0.6
TMEM50B-201ENST00000420455 C11orf95C9JLR9 678 aaPredicted RBP18.82■□□□□ 0.6
TMEM50B-201ENST00000420455 ZNF326Q5BKZ1 582 aaKnown RBP18.81■□□□□ 0.6
TMEM50B-201ENST00000420455 CARD11Q9BXL7 1154 aa18.81■□□□□ 0.6
TMEM50B-201ENST00000420455 RPGRIP1LQ68CZ1 1315 aa18.81■□□□□ 0.6
TMEM50B-201ENST00000420455 DDX10Q13206 875 aaKnown RBP18.81■□□□□ 0.6
TMEM50B-201ENST00000420455 NEXMIFQ5QGS0 1516 aa18.81■□□□□ 0.6
TMEM50B-201ENST00000420455 SETBP1Q9Y6X0 1596 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms