RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 TCOF1Q13428 1488 aaKnown RBP28.04■■■□□ 2.08
ECHDC3-202ENST00000420401 NCKAP5LQ9HCH0 1330 aa28.04■■■□□ 2.08
ECHDC3-202ENST00000420401 ADGBQ8N7X0 1667 aa28■■■□□ 2.07
ECHDC3-202ENST00000420401 ZNF335Q9H4Z2 1342 aaPredicted RBP27.99■■■□□ 2.07
ECHDC3-202ENST00000420401 UBAP1LF5GYI3 381 aa27.99■■■□□ 2.07
ECHDC3-202ENST00000420401 DHX29Q7Z478 1369 aaKnown RBP27.99■■■□□ 2.07
ECHDC3-202ENST00000420401 FAM50AQ14320 339 aaKnown RBP27.98■■■□□ 2.07
ECHDC3-202ENST00000420401 MYO3AQ8NEV4 1616 aa27.98■■■□□ 2.07
ECHDC3-202ENST00000420401 ZNF142P52746 1687 aaPredicted RBP27.97■■■□□ 2.07
ECHDC3-202ENST00000420401 PKD2Q13563 968 aa27.97■■■□□ 2.07
ECHDC3-202ENST00000420401 ABCC5O15440 1437 aa27.97■■■□□ 2.07
ECHDC3-202ENST00000420401 MAST1Q9Y2H9 1570 aa27.97■■■□□ 2.07
ECHDC3-202ENST00000420401 PLXNC1O60486 1568 aa27.96■■■□□ 2.07
ECHDC3-202ENST00000420401 GGT6Q6P531 493 aa27.96■■■□□ 2.07
ECHDC3-202ENST00000420401 DAPK1P53355 1430 aa27.94■■■□□ 2.06
ECHDC3-202ENST00000420401 CEP170BQ9Y4F5 1589 aaPredicted RBP27.94■■■□□ 2.06
ECHDC3-202ENST00000420401 PLA2R1Q13018 1463 aa27.93■■■□□ 2.06
ECHDC3-202ENST00000420401 SHANK2Q9UPX8 1470 aa27.93■■■□□ 2.06
ECHDC3-202ENST00000420401 DNMT1P26358 1616 aaKnown RBP27.91■■■□□ 2.06
ECHDC3-202ENST00000420401 PTPRKQ15262 1439 aa27.9■■■□□ 2.06
ECHDC3-202ENST00000420401 PPP6R1Q9UPN7 881 aa27.88■■■□□ 2.05
ECHDC3-202ENST00000420401 KIF3BO15066 747 aa27.87■■■□□ 2.05
ECHDC3-202ENST00000420401 CROCC2H7BZ55 1655 aa27.85■■■□□ 2.05
ECHDC3-202ENST00000420401 CHIC2Q9UKJ5 165 aa27.85■■■□□ 2.05
ECHDC3-202ENST00000420401 RRP7BPQ9NSQ0 103 aa27.84■■■□□ 2.05
ECHDC3-202ENST00000420401 ANKRD30AQ9BXX3 1397 aa27.84■■■□□ 2.05
ECHDC3-202ENST00000420401 KIF15Q9NS87 1388 aa27.83■■■□□ 2.05
ECHDC3-202ENST00000420401 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.81■■■□□ 2.04
ECHDC3-202ENST00000420401 DUOX2Q9NRD8 1548 aa27.81■■■□□ 2.04
ECHDC3-202ENST00000420401 SCAF1Q9H7N4 1312 aaKnown RBP27.8■■■□□ 2.04
ECHDC3-202ENST00000420401 A2ML1A8K2U0 1454 aa27.79■■■□□ 2.04
ECHDC3-202ENST00000420401 POLR1AO95602 1720 aaPredicted RBP27.77■■■□□ 2.04
ECHDC3-202ENST00000420401 ADGRL2O95490 1459 aa27.74■■■□□ 2.03
ECHDC3-202ENST00000420401 ERBINQ96RT1 1412 aa27.74■■■□□ 2.03
ECHDC3-202ENST00000420401 PIP4K2BP78356 416 aa27.73■■■□□ 2.03
ECHDC3-202ENST00000420401 EIF2AK4Q9P2K8 1649 aaKnown RBP27.73■■■□□ 2.03
ECHDC3-202ENST00000420401 RRBP1Q9P2E9 1410 aaKnown RBP27.73■■■□□ 2.03
ECHDC3-202ENST00000420401 WASHC2CQ9Y4E1 1318 aa27.72■■■□□ 2.03
ECHDC3-202ENST00000420401 TOM1O60784 492 aa27.72■■■□□ 2.03
ECHDC3-202ENST00000420401 ITGAEP38570 1179 aa27.72■■■□□ 2.03
ECHDC3-202ENST00000420401 FAM135AQ9P2D6 1515 aa27.7■■■□□ 2.02
ECHDC3-202ENST00000420401 CPS1P31327 1500 aa27.69■■■□□ 2.02
ECHDC3-202ENST00000420401 HSPA1LP34931 641 aa27.69■■■□□ 2.02
ECHDC3-202ENST00000420401 TNRQ92752 1358 aa27.69■■■□□ 2.02
ECHDC3-202ENST00000420401 FBXO31Q5XUX0 539 aaPredicted RBP27.68■■■□□ 2.02
ECHDC3-202ENST00000420401 ROCK1Q13464 1354 aa27.67■■■□□ 2.02
ECHDC3-202ENST00000420401 RNF17Q9BXT8 1623 aaKnown RBP27.67■■■□□ 2.02
ECHDC3-202ENST00000420401 KDM5DQ9BY66 1539 aa27.67■■■□□ 2.02
ECHDC3-202ENST00000420401 NEURL4Q96JN8 1562 aa27.65■■■□□ 2.02
ECHDC3-202ENST00000420401 ANKLE2Q86XL3 938 aa27.64■■■□□ 2.02
ECHDC3-202ENST00000420401 MED1Q15648 1581 aaPredicted RBP27.64■■■□□ 2.01
ECHDC3-202ENST00000420401 PZPP20742 1482 aa27.62■■■□□ 2.01
ECHDC3-202ENST00000420401 ANKRD50Q9ULJ7 1429 aa27.61■■■□□ 2.01
ECHDC3-202ENST00000420401 THEMISQ8N1K5 641 aaPredicted RBP27.61■■■□□ 2.01
ECHDC3-202ENST00000420401 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.6■■■□□ 2.01
ECHDC3-202ENST00000420401 KANK1Q14678 1352 aa27.59■■■□□ 2.01
ECHDC3-202ENST00000420401 ABCC3O15438 1527 aa27.57■■■□□ 2
ECHDC3-202ENST00000420401 MROH1Q8NDA8 1641 aa27.57■■■□□ 2
ECHDC3-202ENST00000420401 UGGT1Q9NYU2 1555 aa27.56■■■□□ 2
ECHDC3-202ENST00000420401 PRDM15P57071 1507 aaPredicted RBP27.55■■■□□ 2
ECHDC3-202ENST00000420401 ZC3H13Q5T200 1668 aaKnown RBP27.55■■■□□ 2
ECHDC3-202ENST00000420401 PHF23Q9BUL5 403 aaPredicted RBP27.54■■■□□ 2
ECHDC3-202ENST00000420401 NLRP1Q9C000 1473 aa27.54■■■□□ 2
ECHDC3-202ENST00000420401 VWDEQ8N2E2 1590 aa27.53■■■□□ 2
ECHDC3-202ENST00000420401 DEPDC5O75140 1603 aa27.52■■■□□ 2
ECHDC3-202ENST00000420401 NPHP4O75161 1426 aaPredicted RBP27.52■■■□□ 2
ECHDC3-202ENST00000420401 IQGAP1P46940 1657 aa27.49■■□□□ 1.99
ECHDC3-202ENST00000420401 MED14O60244 1454 aa27.49■■□□□ 1.99
ECHDC3-202ENST00000420401 SENP3Q9H4L4 574 aaPredicted RBP27.45■■□□□ 1.98
ECHDC3-202ENST00000420401 CEP152O94986 1710 aa27.44■■□□□ 1.98
ECHDC3-202ENST00000420401 ARHGAP31Q2M1Z3 1444 aa27.44■■□□□ 1.98
ECHDC3-202ENST00000420401 CFAP65Q6ZU64 1925 aaKnown RBP27.43■■□□□ 1.98
ECHDC3-202ENST00000420401 LMTK2Q8IWU2 1503 aa27.43■■□□□ 1.98
ECHDC3-202ENST00000420401 STRCP1A6NGW2 1772 aa27.41■■□□□ 1.98
ECHDC3-202ENST00000420401 ALKQ9UM73 1620 aa27.41■■□□□ 1.98
ECHDC3-202ENST00000420401 NAIPQ13075 1403 aa27.38■■□□□ 1.97
ECHDC3-202ENST00000420401 UNC13BO14795 1591 aa27.38■■□□□ 1.97
ECHDC3-202ENST00000420401 ERVK-7P63135 1459 aa27.38■■□□□ 1.97
ECHDC3-202ENST00000420401 LRRC7Q96NW7 1537 aa27.37■■□□□ 1.97
ECHDC3-202ENST00000420401 SYNMO15061 1565 aa27.37■■□□□ 1.97
ECHDC3-202ENST00000420401 NUP155O75694 1391 aa27.35■■□□□ 1.97
ECHDC3-202ENST00000420401 HFM1A2PYH4 1435 aa27.35■■□□□ 1.97
ECHDC3-202ENST00000420401 EFCAB6Q5THR3 1501 aa27.32■■□□□ 1.96
ECHDC3-202ENST00000420401 UBR1Q8IWV7 1749 aa27.31■■□□□ 1.96
ECHDC3-202ENST00000420401 GCC2Q8IWJ2 1684 aa27.3■■□□□ 1.96
ECHDC3-202ENST00000420401 RPRD2Q5VT52 1461 aaKnown RBP27.29■■□□□ 1.96
ECHDC3-202ENST00000420401 TET3O43151 1660 aa27.27■■□□□ 1.96
ECHDC3-202ENST00000420401 IQGAP3Q86VI3 1631 aa27.27■■□□□ 1.96
ECHDC3-202ENST00000420401 SCAF11Q99590 1463 aaKnown RBP27.26■■□□□ 1.95
ECHDC3-202ENST00000420401 TXNDC2Q86VQ3 553 aa27.24■■□□□ 1.95
ECHDC3-202ENST00000420401 NOS1P29475 1434 aa27.24■■□□□ 1.95
ECHDC3-202ENST00000420401 TRIM52Q96A61 297 aa27.23■■□□□ 1.95
ECHDC3-202ENST00000420401 EID1Q9Y6B2 187 aa27.22■■□□□ 1.95
ECHDC3-202ENST00000420401 SLC52A1Q9NWF4 448 aa27.21■■□□□ 1.95
ECHDC3-202ENST00000420401 XIRP1Q702N8 1843 aaKnown RBP27.2■■□□□ 1.95
ECHDC3-202ENST00000420401 LTKP29376 864 aa27.2■■□□□ 1.94
ECHDC3-202ENST00000420401 IDI1Q13907 227 aa27.18■■□□□ 1.94
ECHDC3-202ENST00000420401 STAG3Q9UJ98 1225 aa27.18■■□□□ 1.94
ECHDC3-202ENST00000420401 SLIT1O75093 1534 aa27.17■■□□□ 1.94
ECHDC3-202ENST00000420401 ACIN1Q9UKV3 1341 aaKnown RBP27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms