RNA–Protein interactions for RNA: ENST00000420107.1

CNOT11-202, Transcript of CCR4-NOT transcription complex subunit 11, humanhuman

TSL 2

Gene CNOT11, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11-202ENST00000420107 ZNF710Q8N1W2 664 aa12.03□□□□□ -0.48
CNOT11-202ENST00000420107 ZNF454Q8N9F8 522 aa12.02□□□□□ -0.49
CNOT11-202ENST00000420107 OTUD5Q96G74 571 aa12.02□□□□□ -0.49
CNOT11-202ENST00000420107 PDE4DQ08499 809 aa12.01□□□□□ -0.49
CNOT11-202ENST00000420107 ZDHHC16Q969W1 377 aa12.01□□□□□ -0.49
CNOT11-202ENST00000420107 SNPHO15079 494 aa12□□□□□ -0.49
CNOT11-202ENST00000420107 GPBP1L1Q9HC44 474 aaPredicted RBP11.99□□□□□ -0.49
CNOT11-202ENST00000420107 LHX6Q9UPM6 363 aa11.99□□□□□ -0.49
CNOT11-202ENST00000420107 C6orf132Q5T0Z8 1188 aa11.98□□□□□ -0.49
CNOT11-202ENST00000420107 ADAM33Q9BZ11 813 aa11.98□□□□□ -0.49
CNOT11-202ENST00000420107 GTF3C3Q9Y5Q9 886 aa11.98□□□□□ -0.49
CNOT11-202ENST00000420107 HOXB1P14653 301 aaPredicted RBP11.97□□□□□ -0.49
CNOT11-202ENST00000420107 AMHR2Q16671 573 aa11.96□□□□□ -0.49
CNOT11-202ENST00000420107 KDM4CQ9H3R0 1056 aa11.95□□□□□ -0.5
CNOT11-202ENST00000420107 CERKQ8TCT0 537 aa11.94□□□□□ -0.5
CNOT11-202ENST00000420107 PSDA5PKW4 1024 aaPredicted RBP11.93□□□□□ -0.5
CNOT11-202ENST00000420107 LHX8Q68G74 356 aa11.92□□□□□ -0.5
CNOT11-202ENST00000420107 PPP4R3BQ5MIZ7 849 aa11.91□□□□□ -0.5
CNOT11-202ENST00000420107 TTC13Q8NBP0 860 aa11.91□□□□□ -0.5
CNOT11-202ENST00000420107 TIMELESSQ9UNS1 1208 aa11.91□□□□□ -0.5
CNOT11-202ENST00000420107 PARP9Q8IXQ6 854 aa11.9□□□□□ -0.5
CNOT11-202ENST00000420107 BCL2L12Q9HB09 334 aa11.9□□□□□ -0.5
CNOT11-202ENST00000420107 RBM27Q9P2N5 1060 aaKnown RBP11.9□□□□□ -0.5
CNOT11-202ENST00000420107 PADI6Q6TGC4 694 aa11.89□□□□□ -0.51
CNOT11-202ENST00000420107 ERICH6Q7L0X2 663 aa11.86□□□□□ -0.51
CNOT11-202ENST00000420107 COL9A1P20849 921 aa11.85□□□□□ -0.51
CNOT11-202ENST00000420107 PRSS12P56730 875 aa11.85□□□□□ -0.51
CNOT11-202ENST00000420107 PHOX2BQ99453 314 aa11.85□□□□□ -0.51
CNOT11-202ENST00000420107 ADGRG1Q9Y653 693 aa11.85□□□□□ -0.51
CNOT11-202ENST00000420107 TMUB1Q9BVT8 246 aa11.84□□□□□ -0.51
CNOT11-202ENST00000420107 CDCA7LQ96GN5 454 aa11.83□□□□□ -0.52
CNOT11-202ENST00000420107 REPIN1Q9BWE0 567 aaKnown RBP11.83□□□□□ -0.52
CNOT11-202ENST00000420107 DAXXQ9UER7 740 aaPredicted RBP11.83□□□□□ -0.52
CNOT11-202ENST00000420107 PPP1R3GB7ZBB8 358 aa11.82□□□□□ -0.52
CNOT11-202ENST00000420107 OATP04181 439 aa11.82□□□□□ -0.52
CNOT11-202ENST00000420107 PTPREP23469 700 aa11.82□□□□□ -0.52
CNOT11-202ENST00000420107 TTLL12Q14166 644 aaPredicted RBP11.82□□□□□ -0.52
CNOT11-202ENST00000420107 FAM161AQ3B820 660 aa11.82□□□□□ -0.52
CNOT11-202ENST00000420107 METTL3Q86U44 580 aaKnown RBP11.82□□□□□ -0.52
CNOT11-202ENST00000420107 IL27Q8NEV9 243 aa11.82□□□□□ -0.52
CNOT11-202ENST00000420107 FAM117AQ9C073 453 aa11.82□□□□□ -0.52
CNOT11-202ENST00000420107 FAM198AQ9UFP1 575 aa11.81□□□□□ -0.52
CNOT11-202ENST00000420107 GIGYF2Q6Y7W6 1299 aaKnown RBP11.8□□□□□ -0.52
CNOT11-202ENST00000420107 PXYLP1Q8TE99 480 aa11.8□□□□□ -0.52
CNOT11-202ENST00000420107 PLEKHG3A1L390 1219 aa11.79□□□□□ -0.52
CNOT11-202ENST00000420107 CLCN1P35523 988 aa11.78□□□□□ -0.52
CNOT11-202ENST00000420107 MDM2Q00987 491 aaPredicted RBP11.77□□□□□ -0.53
CNOT11-202ENST00000420107 DDRGK1Q96HY6 314 aa11.77□□□□□ -0.53
CNOT11-202ENST00000420107 GPCPD1Q9NPB8 672 aa11.77□□□□□ -0.53
CNOT11-202ENST00000420107 TSKSQ9UJT2 592 aa11.77□□□□□ -0.53
CNOT11-202ENST00000420107 ST18O60284 1047 aa11.76□□□□□ -0.53
CNOT11-202ENST00000420107 MS4A1P11836 297 aa11.76□□□□□ -0.53
CNOT11-202ENST00000420107 RBM46Q8TBY0 533 aaKnown RBP11.74□□□□□ -0.53
CNOT11-202ENST00000420107 KCNK17Q96T54 332 aa11.74□□□□□ -0.53
CNOT11-202ENST00000420107 TRIM6-TRIM34B2RNG4 842 aa11.73□□□□□ -0.53
CNOT11-202ENST00000420107 NLRP7Q8WX94 980 aa11.73□□□□□ -0.53
CNOT11-202ENST00000420107 EYA1Q99502 592 aa11.73□□□□□ -0.53
CNOT11-202ENST00000420107 ERBB3P21860 1342 aa11.72□□□□□ -0.53
CNOT11-202ENST00000420107 C3orf80F5H4A9 247 aa11.72□□□□□ -0.53
CNOT11-202ENST00000420107 VARS2Q5ST30 1063 aaKnown RBP11.72□□□□□ -0.53
CNOT11-202ENST00000420107 ONECUT3O60422 494 aaPredicted RBP11.71□□□□□ -0.53
CNOT11-202ENST00000420107 POTEEQ6S8J3 1075 aa11.71□□□□□ -0.53
CNOT11-202ENST00000420107 C14orf37Q86TY3 774 aa11.71□□□□□ -0.53
CNOT11-202ENST00000420107 FAM217BQ9NTX9 383 aaPredicted RBP11.7□□□□□ -0.54
CNOT11-202ENST00000420107 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.69□□□□□ -0.54
CNOT11-202ENST00000420107 SSTR3P32745 418 aaPredicted RBP11.69□□□□□ -0.54
CNOT11-202ENST00000420107 PROX2Q3B8N5 592 aa11.69□□□□□ -0.54
CNOT11-202ENST00000420107 ZBED2Q9BTP6 218 aa11.69□□□□□ -0.54
CNOT11-202ENST00000420107 NBPF26B4DH59 902 aa11.68□□□□□ -0.54
CNOT11-202ENST00000420107 PSEN2P49810 448 aa11.68□□□□□ -0.54
CNOT11-202ENST00000420107 NUDT18Q6ZVK8 323 aa11.68□□□□□ -0.54
CNOT11-202ENST00000420107 PACS2Q86VP3 889 aa11.68□□□□□ -0.54
CNOT11-202ENST00000420107 TATDN2Q93075 761 aa11.68□□□□□ -0.54
CNOT11-202ENST00000420107 KCNH8Q96L42 1107 aa11.68□□□□□ -0.54
CNOT11-202ENST00000420107 RCCD1A6NED2 376 aa11.67□□□□□ -0.54
CNOT11-202ENST00000420107 ARHGAP33O14559 1287 aa11.67□□□□□ -0.54
CNOT11-202ENST00000420107 EMP3P54852 163 aa11.67□□□□□ -0.54
CNOT11-202ENST00000420107 MARVELD3Q96A59 401 aa11.67□□□□□ -0.54
CNOT11-202ENST00000420107 GOPCQ9HD26 462 aa11.66□□□□□ -0.54
CNOT11-202ENST00000420107 PNMA3Q9UL41 463 aa11.66□□□□□ -0.54
CNOT11-202ENST00000420107 SLC4A5Q9BY07 1137 aa11.65□□□□□ -0.54
CNOT11-202ENST00000420107 PBX2P40425 430 aa11.64□□□□□ -0.55
CNOT11-202ENST00000420107 DNAJB2P25686 324 aa11.63□□□□□ -0.55
CNOT11-202ENST00000420107 DMRTA1Q5VZB9 504 aa11.63□□□□□ -0.55
CNOT11-202ENST00000420107 ZNF687Q8N1G0 1237 aa11.63□□□□□ -0.55
CNOT11-202ENST00000420107 KIAA1468Q9P260 1216 aa11.63□□□□□ -0.55
CNOT11-202ENST00000420107 FAM205CA6NFA0 338 aa11.62□□□□□ -0.55
CNOT11-202ENST00000420107 SMAPO00193 183 aa11.62□□□□□ -0.55
CNOT11-202ENST00000420107 BEGAINQ9BUH8 593 aa11.62□□□□□ -0.55
CNOT11-202ENST00000420107 AXIN2Q9Y2T1 843 aa11.62□□□□□ -0.55
CNOT11-202ENST00000420107 LCE2DQ5TA82 110 aaPredicted RBP11.61□□□□□ -0.55
CNOT11-202ENST00000420107 FAM163AQ96GL9 167 aaPredicted RBP11.61□□□□□ -0.55
CNOT11-202ENST00000420107 TMEM134Q9H6X4 195 aa11.61□□□□□ -0.55
CNOT11-202ENST00000420107 POTEB3A0JP26 581 aa11.6□□□□□ -0.55
CNOT11-202ENST00000420107 SH3D19Q5HYK7 790 aa11.6□□□□□ -0.55
CNOT11-202ENST00000420107 POTEBQ6S5H4 581 aa11.6□□□□□ -0.55
CNOT11-202ENST00000420107 RABGEF1Q9UJ41 708 aa11.6□□□□□ -0.55
CNOT11-202ENST00000420107 HS3ST6Q96QI5 342 aa11.58□□□□□ -0.56
CNOT11-202ENST00000420107 CD46P15529 392 aa11.57□□□□□ -0.56
CNOT11-202ENST00000420107 PLSCR2Q9NRY7 297 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms