RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 IRX5P78411 483 aaPredicted RBP10.51□□□□□ -0.73
LINC02539-202ENST00000419220 MARVELD3Q96A59 401 aa10.51□□□□□ -0.73
LINC02539-202ENST00000419220 EPRSP07814 1512 aaKnown RBP10.51□□□□□ -0.73
LINC02539-202ENST00000419220 OCEL1Q9H607 264 aa10.5□□□□□ -0.73
LINC02539-202ENST00000419220 DIP2BQ9P265 1576 aa10.5□□□□□ -0.73
LINC02539-202ENST00000419220 KIF13AQ9H1H9 1805 aa10.49□□□□□ -0.73
LINC02539-202ENST00000419220 SLC24A1O60721 1099 aa10.49□□□□□ -0.73
LINC02539-202ENST00000419220 CFAP43Q8NDM7 1665 aa10.49□□□□□ -0.73
LINC02539-202ENST00000419220 PHLDB1Q86UU1 1377 aa10.49□□□□□ -0.73
LINC02539-202ENST00000419220 CD109Q6YHK3 1445 aa10.49□□□□□ -0.73
LINC02539-202ENST00000419220 IFNL1Q8IU54 200 aa10.48□□□□□ -0.73
LINC02539-202ENST00000419220 ZBTB47Q9UFB7 747 aaPredicted RBP10.48□□□□□ -0.73
LINC02539-202ENST00000419220 VPS8Q8N3P4 1428 aa10.48□□□□□ -0.73
LINC02539-202ENST00000419220 EMP3P54852 163 aa10.47□□□□□ -0.73
LINC02539-202ENST00000419220 MTUS2Q5JR59 1369 aa10.47□□□□□ -0.73
LINC02539-202ENST00000419220 TSPOAP1O95153 1857 aa10.47□□□□□ -0.73
LINC02539-202ENST00000419220 SPOCK2Q92563 424 aa10.46□□□□□ -0.73
LINC02539-202ENST00000419220 PCF11O94913 1555 aaKnown RBP10.45□□□□□ -0.74
LINC02539-202ENST00000419220 TROQ12816 1431 aaPredicted RBP10.45□□□□□ -0.74
LINC02539-202ENST00000419220 PKD2Q13563 968 aa10.45□□□□□ -0.74
LINC02539-202ENST00000419220 KIF14Q15058 1648 aa10.44□□□□□ -0.74
LINC02539-202ENST00000419220 CDK13Q14004 1512 aaKnown RBP10.43□□□□□ -0.74
LINC02539-202ENST00000419220 EFCAB2Q5VUJ9 269 aa10.43□□□□□ -0.74
LINC02539-202ENST00000419220 ABCA9Q8IUA7 1624 aa10.43□□□□□ -0.74
LINC02539-202ENST00000419220 MAP3K4Q9Y6R4 1608 aa10.43□□□□□ -0.74
LINC02539-202ENST00000419220 CFAP74Q9C0B2 1584 aa10.43□□□□□ -0.74
LINC02539-202ENST00000419220 MAGI3Q5TCQ9 1506 aa10.43□□□□□ -0.74
LINC02539-202ENST00000419220 FAM212AQ96EL1 285 aa10.41□□□□□ -0.74
LINC02539-202ENST00000419220 MAP3K1Q13233 1512 aa10.41□□□□□ -0.74
LINC02539-202ENST00000419220 NEO1Q92859 1461 aa10.4□□□□□ -0.74
LINC02539-202ENST00000419220 CCNB3Q8WWL7 1395 aa10.39□□□□□ -0.75
LINC02539-202ENST00000419220 MYO5CQ9NQX4 1742 aa10.38□□□□□ -0.75
LINC02539-202ENST00000419220 EHBP1L1Q8N3D4 1523 aa10.38□□□□□ -0.75
LINC02539-202ENST00000419220 KDM6BO15054 1643 aa10.38□□□□□ -0.75
LINC02539-202ENST00000419220 C3orf67Q6ZVT6 689 aa10.38□□□□□ -0.75
LINC02539-202ENST00000419220 HS3ST6Q96QI5 342 aa10.38□□□□□ -0.75
LINC02539-202ENST00000419220 KRTAP3-3Q9BYR6 98 aa10.38□□□□□ -0.75
LINC02539-202ENST00000419220 KRTAP3-2Q9BYR7 98 aa10.38□□□□□ -0.75
LINC02539-202ENST00000419220 PLCH2O75038 1416 aa10.38□□□□□ -0.75
LINC02539-202ENST00000419220 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.38□□□□□ -0.75
LINC02539-202ENST00000419220 NUBP1P53384 320 aa10.37□□□□□ -0.75
LINC02539-202ENST00000419220 SUPT6HQ7KZ85 1726 aaKnown RBP10.37□□□□□ -0.75
LINC02539-202ENST00000419220 LRRIQ1Q96JM4 1722 aa10.37□□□□□ -0.75
LINC02539-202ENST00000419220 CFDP1Q9UEE9 299 aaPredicted RBP10.37□□□□□ -0.75
LINC02539-202ENST00000419220 ARAP3Q8WWN8 1544 aa10.37□□□□□ -0.75
LINC02539-202ENST00000419220 FANCAO15360 1455 aa10.36□□□□□ -0.75
LINC02539-202ENST00000419220 TIAM1Q13009 1591 aa10.36□□□□□ -0.75
LINC02539-202ENST00000419220 RSPH4AQ5TD94 716 aa10.36□□□□□ -0.75
LINC02539-202ENST00000419220 MYT1LQ9UL68 1186 aa10.36□□□□□ -0.75
LINC02539-202ENST00000419220 ARHGAP5Q13017 1502 aa10.35□□□□□ -0.75
LINC02539-202ENST00000419220 AKNAQ7Z591 1439 aa10.34□□□□□ -0.75
LINC02539-202ENST00000419220 FAM205CA6NFA0 338 aa10.34□□□□□ -0.75
LINC02539-202ENST00000419220 ECM2O94769 699 aaPredicted RBP10.34□□□□□ -0.75
LINC02539-202ENST00000419220 ZNF777Q9ULD5 760 aaPredicted RBP10.34□□□□□ -0.75
LINC02539-202ENST00000419220 LRRC9Q6ZRR7 1453 aa10.34□□□□□ -0.75
LINC02539-202ENST00000419220 PLEKHH2Q8IVE3 1493 aa10.34□□□□□ -0.75
LINC02539-202ENST00000419220 ITSN2Q9NZM3 1697 aa10.34□□□□□ -0.75
LINC02539-202ENST00000419220 L3MBTL3Q96JM7 780 aaPredicted RBP10.33□□□□□ -0.76
LINC02539-202ENST00000419220 PPRC1Q5VV67 1664 aaKnown RBP10.32□□□□□ -0.76
LINC02539-202ENST00000419220 TTC37Q6PGP7 1564 aa10.32□□□□□ -0.76
LINC02539-202ENST00000419220 DENND4BO75064 1496 aaPredicted RBP10.32□□□□□ -0.76
LINC02539-202ENST00000419220 ADGRL1O94910 1474 aa10.31□□□□□ -0.76
LINC02539-202ENST00000419220 CIZ1Q9ULV3 898 aaPredicted RBP10.31□□□□□ -0.76
LINC02539-202ENST00000419220 PREX2Q70Z35 1606 aa10.3□□□□□ -0.76
LINC02539-202ENST00000419220 TSPY4P0CV99 314 aa10.3□□□□□ -0.76
LINC02539-202ENST00000419220 TSPY10P0CW01 314 aa10.3□□□□□ -0.76
LINC02539-202ENST00000419220 SCAPERQ9BY12 1400 aa10.3□□□□□ -0.76
LINC02539-202ENST00000419220 CDC42BPAQ5VT25 1732 aa10.29□□□□□ -0.76
LINC02539-202ENST00000419220 NCOA2Q15596 1464 aa10.29□□□□□ -0.76
LINC02539-202ENST00000419220 ZNF518AQ6AHZ1 1483 aa10.29□□□□□ -0.76
LINC02539-202ENST00000419220 GPATCH8Q9UKJ3 1502 aaKnown RBP10.28□□□□□ -0.76
LINC02539-202ENST00000419220 CDC42BPBQ9Y5S2 1711 aa10.28□□□□□ -0.76
LINC02539-202ENST00000419220 MAGI2Q86UL8 1455 aa10.28□□□□□ -0.76
LINC02539-202ENST00000419220 MIA2Q96PC5 1412 aa10.27□□□□□ -0.77
LINC02539-202ENST00000419220 KIAA1107Q9UPP5 1409 aa10.27□□□□□ -0.77
LINC02539-202ENST00000419220 POTEB3A0JP26 581 aa10.27□□□□□ -0.77
LINC02539-202ENST00000419220 RAPGEF3O95398 923 aa10.27□□□□□ -0.77
LINC02539-202ENST00000419220 KANK4Q5T7N3 995 aaPredicted RBP10.27□□□□□ -0.77
LINC02539-202ENST00000419220 POTEBQ6S5H4 581 aa10.27□□□□□ -0.77
LINC02539-202ENST00000419220 ARID4BQ4LE39 1312 aaPredicted RBP10.25□□□□□ -0.77
LINC02539-202ENST00000419220 MYOM3Q5VTT5 1437 aa10.24□□□□□ -0.77
LINC02539-202ENST00000419220 POGZQ7Z3K3 1410 aa10.24□□□□□ -0.77
LINC02539-202ENST00000419220 RGL2O15211 777 aa10.24□□□□□ -0.77
LINC02539-202ENST00000419220 GOLGA2Q08379 1002 aa10.24□□□□□ -0.77
LINC02539-202ENST00000419220 PDCD7Q8N8D1 485 aaKnown RBP10.24□□□□□ -0.77
LINC02539-202ENST00000419220 RNF166Q96A37 237 aaPredicted RBP10.24□□□□□ -0.77
LINC02539-202ENST00000419220 SPAG9O60271 1321 aaKnown RBP10.24□□□□□ -0.77
LINC02539-202ENST00000419220 HNRNPMP52272 730 aaKnown RBP eCLIP10.23□□□□□ -0.77
LINC02539-202ENST00000419220 ESF1Q9H501 851 aaKnown RBP10.23□□□□□ -0.77
LINC02539-202ENST00000419220 MKRN3Q13064 507 aaKnown RBP10.22□□□□□ -0.77
LINC02539-202ENST00000419220 AFAP1Q8N556 730 aa10.22□□□□□ -0.77
LINC02539-202ENST00000419220 ABCC1P33527 1531 aa10.22□□□□□ -0.77
LINC02539-202ENST00000419220 RICTORQ6R327 1708 aa10.21□□□□□ -0.77
LINC02539-202ENST00000419220 FAM50AQ14320 339 aaKnown RBP10.2□□□□□ -0.78
LINC02539-202ENST00000419220 ZMYM4Q5VZL5 1548 aa10.2□□□□□ -0.78
LINC02539-202ENST00000419220 ZFYVE16Q7Z3T8 1539 aa10.2□□□□□ -0.78
LINC02539-202ENST00000419220 MLH3Q9UHC1 1453 aa10.2□□□□□ -0.78
LINC02539-202ENST00000419220 COL17A1Q9UMD9 1497 aaPredicted RBP10.2□□□□□ -0.78
LINC02539-202ENST00000419220 SAMD9LQ8IVG5 1584 aa10.19□□□□□ -0.78
LINC02539-202ENST00000419220 ATP10AO60312 1499 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms