RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 ATP10AO60312 1499 aa14.64□□□□□ -0.07
HMGA1P6-201ENST00000418454 DEPDC5O75140 1603 aa14.64□□□□□ -0.07
HMGA1P6-201ENST00000418454 IQGAP3Q86VI3 1631 aa14.64□□□□□ -0.07
HMGA1P6-201ENST00000418454 RAPGEF3O95398 923 aa14.64□□□□□ -0.07
HMGA1P6-201ENST00000418454 MYT1LQ9UL68 1186 aa14.64□□□□□ -0.07
HMGA1P6-201ENST00000418454 FAM135AQ9P2D6 1515 aa14.63□□□□□ -0.07
HMGA1P6-201ENST00000418454 PKD2Q13563 968 aa14.63□□□□□ -0.07
HMGA1P6-201ENST00000418454 VWDEQ8N2E2 1590 aa14.62□□□□□ -0.07
HMGA1P6-201ENST00000418454 LMTK2Q8IWU2 1503 aa14.61□□□□□ -0.07
HMGA1P6-201ENST00000418454 KIF3BO15066 747 aa14.6□□□□□ -0.07
HMGA1P6-201ENST00000418454 RPRD2Q5VT52 1461 aaKnown RBP14.6□□□□□ -0.07
HMGA1P6-201ENST00000418454 AGLP35573 1532 aa14.6□□□□□ -0.07
HMGA1P6-201ENST00000418454 PRDM15P57071 1507 aaPredicted RBP14.6□□□□□ -0.07
HMGA1P6-201ENST00000418454 FRMPD1Q5SYB0 1578 aa14.6□□□□□ -0.07
HMGA1P6-201ENST00000418454 RNF17Q9BXT8 1623 aaKnown RBP14.59□□□□□ -0.07
HMGA1P6-201ENST00000418454 PPP1R15AO75807 674 aaPredicted RBP14.58□□□□□ -0.08
HMGA1P6-201ENST00000418454 STAC3Q96MF2 364 aa14.58□□□□□ -0.08
HMGA1P6-201ENST00000418454 SIN3AQ96ST3 1273 aa14.58□□□□□ -0.08
HMGA1P6-201ENST00000418454 TONSLQ96HA7 1378 aa14.58□□□□□ -0.08
HMGA1P6-201ENST00000418454 DIP2CQ9Y2E4 1556 aa14.57□□□□□ -0.08
HMGA1P6-201ENST00000418454 ABCA6Q8N139 1617 aa14.55□□□□□ -0.08
HMGA1P6-201ENST00000418454 NEUROD1Q13562 356 aa14.55□□□□□ -0.08
HMGA1P6-201ENST00000418454 PTPRTO14522 1441 aa14.55□□□□□ -0.08
HMGA1P6-201ENST00000418454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.54□□□□□ -0.08
HMGA1P6-201ENST00000418454 TSPOAP1O95153 1857 aa14.53□□□□□ -0.08
HMGA1P6-201ENST00000418454 TET3O43151 1660 aa14.53□□□□□ -0.08
HMGA1P6-201ENST00000418454 COL17A1Q9UMD9 1497 aaPredicted RBP14.53□□□□□ -0.08
HMGA1P6-201ENST00000418454 ARHGAP31Q2M1Z3 1444 aa14.53□□□□□ -0.08
HMGA1P6-201ENST00000418454 YEATS2Q9ULM3 1422 aa14.52□□□□□ -0.08
HMGA1P6-201ENST00000418454 TRHP20396 242 aaPredicted RBP14.52□□□□□ -0.09
HMGA1P6-201ENST00000418454 MROH1Q8NDA8 1641 aa14.52□□□□□ -0.09
HMGA1P6-201ENST00000418454 NEURL4Q96JN8 1562 aa14.51□□□□□ -0.09
HMGA1P6-201ENST00000418454 CCDC144AA2RUR9 1427 aa14.5□□□□□ -0.09
HMGA1P6-201ENST00000418454 WASHC2CQ9Y4E1 1318 aa14.49□□□□□ -0.09
HMGA1P6-201ENST00000418454 FOXD1Q16676 465 aa14.49□□□□□ -0.09
HMGA1P6-201ENST00000418454 ZC3H13Q5T200 1668 aaKnown RBP14.49□□□□□ -0.09
HMGA1P6-201ENST00000418454 ARHGEF40Q8TER5 1519 aa14.48□□□□□ -0.09
HMGA1P6-201ENST00000418454 PLA2R1Q13018 1463 aa14.48□□□□□ -0.09
HMGA1P6-201ENST00000418454 EFCAB6Q5THR3 1501 aa14.47□□□□□ -0.09
HMGA1P6-201ENST00000418454 GGT6Q6P531 493 aa14.47□□□□□ -0.09
HMGA1P6-201ENST00000418454 L3MBTL2Q969R5 705 aa14.47□□□□□ -0.09
HMGA1P6-201ENST00000418454 TRPM2O94759 1503 aa14.46□□□□□ -0.09
HMGA1P6-201ENST00000418454 ABCC3O15438 1527 aa14.46□□□□□ -0.1
HMGA1P6-201ENST00000418454 CNTLNQ9NXG0 1405 aa14.45□□□□□ -0.1
HMGA1P6-201ENST00000418454 UHRF1BP1Q6BDS2 1440 aa14.44□□□□□ -0.1
HMGA1P6-201ENST00000418454 ZNF316A6NFI3 1004 aaPredicted RBP14.44□□□□□ -0.1
HMGA1P6-201ENST00000418454 E9PCH4 1651 aa14.44□□□□□ -0.1
HMGA1P6-201ENST00000418454 SLC52A1Q9NWF4 448 aa14.43□□□□□ -0.1
HMGA1P6-201ENST00000418454 NOS1P29475 1434 aa14.41□□□□□ -0.1
HMGA1P6-201ENST00000418454 NPATQ14207 1427 aa14.41□□□□□ -0.1
HMGA1P6-201ENST00000418454 SPATA31E1Q6ZUB1 1445 aa14.4□□□□□ -0.1
HMGA1P6-201ENST00000418454 RPGRIP1LQ68CZ1 1315 aa14.4□□□□□ -0.1
HMGA1P6-201ENST00000418454 SPHKAPQ2M3C7 1700 aa14.38□□□□□ -0.11
HMGA1P6-201ENST00000418454 CAMSAP1Q5T5Y3 1602 aa14.37□□□□□ -0.11
HMGA1P6-201ENST00000418454 ESF1Q9H501 851 aaKnown RBP14.36□□□□□ -0.11
HMGA1P6-201ENST00000418454 DCAF11Q8TEB1 546 aa14.34□□□□□ -0.11
HMGA1P6-201ENST00000418454 CEP152O94986 1710 aa14.33□□□□□ -0.12
HMGA1P6-201ENST00000418454 ZMYM3Q14202 1370 aa14.32□□□□□ -0.12
HMGA1P6-201ENST00000418454 EIF4G2P78344 907 aaKnown RBP eCLIP14.31□□□□□ -0.12
HMGA1P6-201ENST00000418454 PIK3C2BO00750 1634 aa14.3□□□□□ -0.12
HMGA1P6-201ENST00000418454 CLTCL1P53675 1640 aa14.3□□□□□ -0.12
HMGA1P6-201ENST00000418454 NBPF8Q3BBV2 869 aa14.3□□□□□ -0.12
HMGA1P6-201ENST00000418454 PRAG1Q86YV5 1406 aa14.3□□□□□ -0.12
HMGA1P6-201ENST00000418454 RALGAPBQ86X10 1494 aa14.3□□□□□ -0.12
HMGA1P6-201ENST00000418454 MROH2AA6NES4 1674 aa14.3□□□□□ -0.12
HMGA1P6-201ENST00000418454 SLC24A1O60721 1099 aa14.29□□□□□ -0.12
HMGA1P6-201ENST00000418454 ARID4BQ4LE39 1312 aaPredicted RBP14.29□□□□□ -0.12
HMGA1P6-201ENST00000418454 GPRASP1Q5JY77 1395 aa14.29□□□□□ -0.12
HMGA1P6-201ENST00000418454 ZFYVE9O95405 1425 aa14.29□□□□□ -0.12
HMGA1P6-201ENST00000418454 MYOM2P54296 1465 aa14.29□□□□□ -0.12
HMGA1P6-201ENST00000418454 SPATA31D1Q6ZQQ2 1576 aa14.29□□□□□ -0.12
HMGA1P6-201ENST00000418454 ADGRB3O60242 1522 aa14.28□□□□□ -0.12
HMGA1P6-201ENST00000418454 ERVK-7P63135 1459 aa14.28□□□□□ -0.12
HMGA1P6-201ENST00000418454 AEBP2Q6ZN18 517 aaPredicted RBP14.28□□□□□ -0.12
HMGA1P6-201ENST00000418454 KIF1BO60333 1816 aa14.27□□□□□ -0.12
HMGA1P6-201ENST00000418454 RGL3Q3MIN7 710 aa14.27□□□□□ -0.13
HMGA1P6-201ENST00000418454 VGFO15240 615 aaPredicted RBP14.26□□□□□ -0.13
HMGA1P6-201ENST00000418454 HDGFP51858 240 aaKnown RBP14.26□□□□□ -0.13
HMGA1P6-201ENST00000418454 IDI1Q13907 227 aa14.26□□□□□ -0.13
HMGA1P6-201ENST00000418454 SIGLEC1Q9BZZ2 1709 aa14.26□□□□□ -0.13
HMGA1P6-201ENST00000418454 PREX1Q8TCU6 1659 aa14.26□□□□□ -0.13
HMGA1P6-201ENST00000418454 NRXN1Q9ULB1 1477 aa14.25□□□□□ -0.13
HMGA1P6-201ENST00000418454 SYNMO15061 1565 aa14.25□□□□□ -0.13
HMGA1P6-201ENST00000418454 CLTCQ00610 1675 aaKnown RBP14.24□□□□□ -0.13
HMGA1P6-201ENST00000418454 LAMC1P11047 1609 aa14.24□□□□□ -0.13
HMGA1P6-201ENST00000418454 KDM2AQ9Y2K7 1162 aa14.24□□□□□ -0.13
HMGA1P6-201ENST00000418454 KDM5AP29375 1690 aaKnown RBP14.23□□□□□ -0.13
HMGA1P6-201ENST00000418454 KIAA1210Q9ULL0 1709 aa14.22□□□□□ -0.13
HMGA1P6-201ENST00000418454 MLECQ14165 292 aa14.22□□□□□ -0.13
HMGA1P6-201ENST00000418454 NLRP1Q9C000 1473 aa14.21□□□□□ -0.13
HMGA1P6-201ENST00000418454 CARD11Q9BXL7 1154 aa14.21□□□□□ -0.13
HMGA1P6-201ENST00000418454 ROCK2O75116 1388 aaKnown RBP14.21□□□□□ -0.14
HMGA1P6-201ENST00000418454 FBXO31Q5XUX0 539 aaPredicted RBP14.2□□□□□ -0.14
HMGA1P6-201ENST00000418454 DIEXFQ68CQ4 756 aaKnown RBP14.2□□□□□ -0.14
HMGA1P6-201ENST00000418454 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.2□□□□□ -0.14
HMGA1P6-201ENST00000418454 TRPM1Q7Z4N2 1603 aa14.19□□□□□ -0.14
HMGA1P6-201ENST00000418454 HSPA5P11021 654 aaKnown RBP14.19□□□□□ -0.14
HMGA1P6-201ENST00000418454 ZNF326Q5BKZ1 582 aaKnown RBP14.19□□□□□ -0.14
HMGA1P6-201ENST00000418454 C14orf93Q9H972 538 aaKnown RBP14.19□□□□□ -0.14
HMGA1P6-201ENST00000418454 TNRQ92752 1358 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms