RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 GZF1Q9H116 711 aaPredicted RBP13.99□□□□□ -0.17
PTCH1-205ENST00000418258 LMOD3Q0VAK6 560 aa13.99□□□□□ -0.17
PTCH1-205ENST00000418258 RALBP1Q15311 655 aa13.99□□□□□ -0.17
PTCH1-205ENST00000418258 CECR2Q9BXF3 1484 aa13.99□□□□□ -0.17
PTCH1-205ENST00000418258 TRIM34Q9BYJ4 488 aa13.99□□□□□ -0.17
PTCH1-205ENST00000418258 NOL8Q76FK4 1167 aaKnown RBP13.98□□□□□ -0.17
PTCH1-205ENST00000418258 SMARCA2P51531 1590 aa13.98□□□□□ -0.17
PTCH1-205ENST00000418258 MFAP1P55081 439 aaKnown RBP13.97□□□□□ -0.17
PTCH1-205ENST00000418258 TCEAL9Q9UHQ7 104 aa13.97□□□□□ -0.17
PTCH1-205ENST00000418258 RAD21O60216 631 aa13.97□□□□□ -0.17
PTCH1-205ENST00000418258 FMN1Q68DA7 1419 aa13.97□□□□□ -0.17
PTCH1-205ENST00000418258 KRI1Q8N9T8 703 aaKnown RBP13.97□□□□□ -0.17
PTCH1-205ENST00000418258 CSPP1Q1MSJ5 1256 aa13.96□□□□□ -0.17
PTCH1-205ENST00000418258 SYTL4Q96C24 671 aaPredicted RBP13.96□□□□□ -0.17
PTCH1-205ENST00000418258 TRAK1Q9UPV9 953 aa13.96□□□□□ -0.18
PTCH1-205ENST00000418258 PHF23Q9BUL5 403 aaPredicted RBP13.95□□□□□ -0.18
PTCH1-205ENST00000418258 SLKQ9H2G2 1235 aaPredicted RBP13.95□□□□□ -0.18
PTCH1-205ENST00000418258 CTDP1Q9Y5B0 961 aaPredicted RBP13.95□□□□□ -0.18
PTCH1-205ENST00000418258 PES1O00541 588 aaKnown RBP13.95□□□□□ -0.18
PTCH1-205ENST00000418258 NGEFQ8N5V2 710 aa13.95□□□□□ -0.18
PTCH1-205ENST00000418258 TDRD9Q8NDG6 1382 aaKnown RBP13.95□□□□□ -0.18
PTCH1-205ENST00000418258 NOL10Q9BSC4 688 aaKnown RBP13.94□□□□□ -0.18
PTCH1-205ENST00000418258 KIF16BQ96L93 1317 aa13.94□□□□□ -0.18
PTCH1-205ENST00000418258 CLUAP1Q96AJ1 413 aa13.94□□□□□ -0.18
PTCH1-205ENST00000418258 KLHL34Q8N239 644 aa13.94□□□□□ -0.18
PTCH1-205ENST00000418258 SF3A1Q15459 793 aaKnown RBP13.93□□□□□ -0.18
PTCH1-205ENST00000418258 TIMELESSQ9UNS1 1208 aa13.93□□□□□ -0.18
PTCH1-205ENST00000418258 FBXW7Q969H0 707 aa13.93□□□□□ -0.18
PTCH1-205ENST00000418258 CCDC18Q5T9S5 1454 aa13.93□□□□□ -0.18
PTCH1-205ENST00000418258 AMOTL1Q8IY63 956 aa13.92□□□□□ -0.18
PTCH1-205ENST00000418258 AKAP17AQ02040 695 aaKnown RBP13.92□□□□□ -0.18
PTCH1-205ENST00000418258 WWC1Q8IX03 1113 aa13.92□□□□□ -0.18
PTCH1-205ENST00000418258 CCER2I3L3R5 266 aa13.92□□□□□ -0.18
PTCH1-205ENST00000418258 TPD52L1Q16890 204 aaPredicted RBP13.92□□□□□ -0.18
PTCH1-205ENST00000418258 H3BQV1 296 aa13.91□□□□□ -0.18
PTCH1-205ENST00000418258 IFFO2Q5TF58 517 aa13.91□□□□□ -0.18
PTCH1-205ENST00000418258 VPS37DQ86XT2 251 aa13.91□□□□□ -0.18
PTCH1-205ENST00000418258 TTC5Q8N0Z6 440 aa13.91□□□□□ -0.18
PTCH1-205ENST00000418258 KIF3AQ9Y496 699 aa13.91□□□□□ -0.18
PTCH1-205ENST00000418258 FOXD4L1Q9NU39 408 aa13.91□□□□□ -0.18
PTCH1-205ENST00000418258 RILPL2Q969X0 211 aa13.9□□□□□ -0.18
PTCH1-205ENST00000418258 COG3Q96JB2 828 aa13.9□□□□□ -0.18
PTCH1-205ENST00000418258 CYB5RLQ6IPT4 315 aa13.9□□□□□ -0.18
PTCH1-205ENST00000418258 CNKSR2Q8WXI2 1034 aa13.9□□□□□ -0.18
PTCH1-205ENST00000418258 KAT6BQ8WYB5 2073 aa13.9□□□□□ -0.18
PTCH1-205ENST00000418258 GOLGA6L1Q8N7Z2 621 aa13.9□□□□□ -0.18
PTCH1-205ENST00000418258 ARID3AQ99856 593 aa13.9□□□□□ -0.18
PTCH1-205ENST00000418258 CWC22Q9HCG8 908 aaKnown RBP13.9□□□□□ -0.18
PTCH1-205ENST00000418258 CENPJQ9HC77 1338 aaPredicted RBP13.9□□□□□ -0.18
PTCH1-205ENST00000418258 PSME1Q06323 249 aa13.89□□□□□ -0.19
PTCH1-205ENST00000418258 TEFQ10587 303 aa13.89□□□□□ -0.19
PTCH1-205ENST00000418258 ST18O60284 1047 aa13.88□□□□□ -0.19
PTCH1-205ENST00000418258 FOXD4L5Q5VV16 416 aaPredicted RBP13.88□□□□□ -0.19
PTCH1-205ENST00000418258 FOXD4L4Q8WXT5 416 aaPredicted RBP13.88□□□□□ -0.19
PTCH1-205ENST00000418258 TPM3P06753 285 aa13.88□□□□□ -0.19
PTCH1-205ENST00000418258 RRP7AQ9Y3A4 280 aaKnown RBP13.88□□□□□ -0.19
PTCH1-205ENST00000418258 RAB3GAP2Q9H2M9 1393 aa13.87□□□□□ -0.19
PTCH1-205ENST00000418258 NEXNQ0ZGT2 675 aa13.87□□□□□ -0.19
PTCH1-205ENST00000418258 RSPH4AQ5TD94 716 aa13.87□□□□□ -0.19
PTCH1-205ENST00000418258 FAM184AQ8NB25 1140 aa13.87□□□□□ -0.19
PTCH1-205ENST00000418258 CCDC88BA6NC98 1476 aa13.87□□□□□ -0.19
PTCH1-205ENST00000418258 KANK4Q5T7N3 995 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-205ENST00000418258 PHF14O94880 888 aa13.86□□□□□ -0.19
PTCH1-205ENST00000418258 TSR1Q2NL82 804 aaKnown RBP13.86□□□□□ -0.19
PTCH1-205ENST00000418258 SYNE3Q6ZMZ3 975 aa13.86□□□□□ -0.19
PTCH1-205ENST00000418258 VPS8Q8N3P4 1428 aa13.86□□□□□ -0.19
PTCH1-205ENST00000418258 WIZO95785 1651 aa13.86□□□□□ -0.19
PTCH1-205ENST00000418258 UACAQ9BZF9 1416 aa13.86□□□□□ -0.19
PTCH1-205ENST00000418258 TCERG1O14776 1098 aaKnown RBP13.86□□□□□ -0.19
PTCH1-205ENST00000418258 C9orf78Q9NZ63 289 aaPredicted RBP13.86□□□□□ -0.19
PTCH1-205ENST00000418258 LRRFIP1Q32MZ4 808 aaKnown RBP13.86□□□□□ -0.19
PTCH1-205ENST00000418258 EIF2S2P20042 333 aaKnown RBP13.85□□□□□ -0.19
PTCH1-205ENST00000418258 ELL2O00472 640 aaPredicted RBP13.85□□□□□ -0.19
PTCH1-205ENST00000418258 DCAF8L1A6NGE4 600 aa13.85□□□□□ -0.19
PTCH1-205ENST00000418258 APPP05067 770 aa13.85□□□□□ -0.19
PTCH1-205ENST00000418258 TPM2P07951 284 aa13.84□□□□□ -0.19
PTCH1-205ENST00000418258 EVC2Q86UK5 1308 aa13.84□□□□□ -0.19
PTCH1-205ENST00000418258 CCDC144AA2RUR9 1427 aa13.83□□□□□ -0.19
PTCH1-205ENST00000418258 NECTIN2Q92692 538 aa13.83□□□□□ -0.2
PTCH1-205ENST00000418258 DHX16O60231 1041 aaKnown RBP13.83□□□□□ -0.2
PTCH1-205ENST00000418258 JPH4Q96JJ6 628 aa13.83□□□□□ -0.2
PTCH1-205ENST00000418258 CGNL1Q0VF96 1302 aa13.83□□□□□ -0.2
PTCH1-205ENST00000418258 ANKRD45Q5TZF3 282 aa13.82□□□□□ -0.2
PTCH1-205ENST00000418258 MCTP1Q6DN14 999 aa13.82□□□□□ -0.2
PTCH1-205ENST00000418258 MINK1Q8N4C8 1332 aaPredicted RBP13.81□□□□□ -0.2
PTCH1-205ENST00000418258 SAMD1Q6SPF0 538 aaPredicted RBP13.81□□□□□ -0.2
PTCH1-205ENST00000418258 VGFO15240 615 aaPredicted RBP13.81□□□□□ -0.2
PTCH1-205ENST00000418258 FBXO3Q9UK99 471 aa13.81□□□□□ -0.2
PTCH1-205ENST00000418258 ATF3P18847 181 aa13.81□□□□□ -0.2
PTCH1-205ENST00000418258 USP35Q9P2H5 1018 aa13.81□□□□□ -0.2
PTCH1-205ENST00000418258 NLRP13Q86W25 1043 aa13.8□□□□□ -0.2
PTCH1-205ENST00000418258 DEKP35659 375 aaKnown RBP13.8□□□□□ -0.2
PTCH1-205ENST00000418258 FOXD4L6Q3SYB3 417 aaPredicted RBP13.8□□□□□ -0.2
PTCH1-205ENST00000418258 FOXD4L3Q6VB84 417 aaPredicted RBP13.8□□□□□ -0.2
PTCH1-205ENST00000418258 FHOD3Q2V2M9 1422 aa13.8□□□□□ -0.2
PTCH1-205ENST00000418258 TRIM29Q14134 588 aa13.8□□□□□ -0.2
PTCH1-205ENST00000418258 RBM33Q96EV2 1170 aaKnown RBP13.79□□□□□ -0.2
PTCH1-205ENST00000418258 BCL2L13Q9BXK5 485 aa13.79□□□□□ -0.2
PTCH1-205ENST00000418258 L3MBTL2Q969R5 705 aa13.79□□□□□ -0.2
PTCH1-205ENST00000418258 DIAPH3Q9NSV4 1193 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms