RNA–Protein interactions for RNA: ENST00000417762.5

SHPRH-204, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-204ENST00000417762 HRCP23327 699 aa11.8□□□□□ -0.52
SHPRH-204ENST00000417762 IFT140Q96RY7 1462 aa11.8□□□□□ -0.52
SHPRH-204ENST00000417762 ARHGAP35Q9NRY4 1499 aa11.8□□□□□ -0.52
SHPRH-204ENST00000417762 C2orf72A6NCS6 295 aa11.79□□□□□ -0.52
SHPRH-204ENST00000417762 ZNF316A6NFI3 1004 aaPredicted RBP11.78□□□□□ -0.52
SHPRH-204ENST00000417762 AQRO60306 1485 aaKnown RBP eCLIP11.77□□□□□ -0.52
SHPRH-204ENST00000417762 KHSRPQ92945 711 aaKnown RBP eCLIP11.77□□□□□ -0.53
SHPRH-204ENST00000417762 RNF166Q96A37 237 aaPredicted RBP11.76□□□□□ -0.53
SHPRH-204ENST00000417762 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
SHPRH-204ENST00000417762 GRIN2BQ13224 1484 aa11.74□□□□□ -0.53
SHPRH-204ENST00000417762 FHAD1B1AJZ9 1412 aa11.73□□□□□ -0.53
SHPRH-204ENST00000417762 TTBK1Q5TCY1 1321 aaPredicted RBP11.73□□□□□ -0.53
SHPRH-204ENST00000417762 MYT1LQ9UL68 1186 aa11.73□□□□□ -0.53
SHPRH-204ENST00000417762 ZNF608Q9ULD9 1512 aaPredicted RBP11.73□□□□□ -0.53
SHPRH-204ENST00000417762 SLC34A2O95436 690 aa11.72□□□□□ -0.53
SHPRH-204ENST00000417762 PBRM1Q86U86 1689 aa11.71□□□□□ -0.53
SHPRH-204ENST00000417762 PTGER2P43116 358 aa11.71□□□□□ -0.53
SHPRH-204ENST00000417762 TMC2Q8TDI7 906 aa11.71□□□□□ -0.53
SHPRH-204ENST00000417762 CTTNBP2Q8WZ74 1663 aa11.7□□□□□ -0.54
SHPRH-204ENST00000417762 NUDT7P0C024 238 aa11.69□□□□□ -0.54
SHPRH-204ENST00000417762 PPP1R37O75864 691 aa11.68□□□□□ -0.54
SHPRH-204ENST00000417762 PCDHGA4Q9Y5G9 962 aa11.68□□□□□ -0.54
SHPRH-204ENST00000417762 EFCAB5A4FU69 1503 aa11.68□□□□□ -0.54
SHPRH-204ENST00000417762 ADAMTS12P58397 1594 aa11.67□□□□□ -0.54
SHPRH-204ENST00000417762 KANK4Q5T7N3 995 aaPredicted RBP11.67□□□□□ -0.54
SHPRH-204ENST00000417762 P3H3Q8IVL6 736 aa11.67□□□□□ -0.54
SHPRH-204ENST00000417762 LSM11P83369 360 aaKnown RBP eCLIP11.66□□□□□ -0.54
SHPRH-204ENST00000417762 PBX2P40425 430 aa11.65□□□□□ -0.54
SHPRH-204ENST00000417762 ANKRD13DQ6ZTN6 518 aa11.65□□□□□ -0.54
SHPRH-204ENST00000417762 MAP3K1Q13233 1512 aa11.65□□□□□ -0.55
SHPRH-204ENST00000417762 EIF4G3O43432 1585 aaKnown RBP11.64□□□□□ -0.55
SHPRH-204ENST00000417762 FHOD3Q2V2M9 1422 aa11.64□□□□□ -0.55
SHPRH-204ENST00000417762 LHX6Q9UPM6 363 aa11.64□□□□□ -0.55
SHPRH-204ENST00000417762 SNAPC4Q5SXM2 1469 aa11.63□□□□□ -0.55
SHPRH-204ENST00000417762 HS6ST3Q8IZP7 471 aa11.62□□□□□ -0.55
SHPRH-204ENST00000417762 SAMD9Q5K651 1589 aa11.62□□□□□ -0.55
SHPRH-204ENST00000417762 ZEB1P37275 1124 aaPredicted RBP11.61□□□□□ -0.55
SHPRH-204ENST00000417762 MAGI1Q96QZ7 1491 aaPredicted RBP11.61□□□□□ -0.55
SHPRH-204ENST00000417762 FMN1Q68DA7 1419 aa11.6□□□□□ -0.55
SHPRH-204ENST00000417762 CASKIN1Q8WXD9 1431 aa11.6□□□□□ -0.55
SHPRH-204ENST00000417762 TIAM1Q13009 1591 aa11.58□□□□□ -0.55
SHPRH-204ENST00000417762 IQGAP2Q13576 1575 aa11.58□□□□□ -0.55
SHPRH-204ENST00000417762 GRIN2AQ12879 1464 aa11.58□□□□□ -0.56
SHPRH-204ENST00000417762 FYCO1Q9BQS8 1478 aa11.58□□□□□ -0.56
SHPRH-204ENST00000417762 CHMP7Q8WUX9 453 aaPredicted RBP11.58□□□□□ -0.56
SHPRH-204ENST00000417762 KIAA0586Q9BVV6 1533 aa11.58□□□□□ -0.56
SHPRH-204ENST00000417762 SYNJ2O15056 1496 aa11.57□□□□□ -0.56
SHPRH-204ENST00000417762 POTEEQ6S8J3 1075 aa11.57□□□□□ -0.56
SHPRH-204ENST00000417762 PCF11O94913 1555 aaKnown RBP11.57□□□□□ -0.56
SHPRH-204ENST00000417762 UGGT2Q9NYU1 1516 aa11.56□□□□□ -0.56
SHPRH-204ENST00000417762 PSDA5PKW4 1024 aaPredicted RBP11.56□□□□□ -0.56
SHPRH-204ENST00000417762 FOXK1P85037 733 aa11.56□□□□□ -0.56
SHPRH-204ENST00000417762 PTCD2Q8WV60 388 aaKnown RBP11.56□□□□□ -0.56
SHPRH-204ENST00000417762 ATP1B4Q9UN42 357 aaPredicted RBP11.56□□□□□ -0.56
SHPRH-204ENST00000417762 LRRC9Q6ZRR7 1453 aa11.56□□□□□ -0.56
SHPRH-204ENST00000417762 RRBP1Q9P2E9 1410 aaKnown RBP11.54□□□□□ -0.56
SHPRH-204ENST00000417762 KDM4FA0A1W2PPD8 638 aa11.54□□□□□ -0.56
SHPRH-204ENST00000417762 GPHNQ9NQX3 736 aaPredicted RBP11.54□□□□□ -0.56
SHPRH-204ENST00000417762 AXIN2Q9Y2T1 843 aa11.54□□□□□ -0.56
SHPRH-204ENST00000417762 PLPP6Q8IY26 295 aa11.53□□□□□ -0.56
SHPRH-204ENST00000417762 CFAP43Q8NDM7 1665 aa11.52□□□□□ -0.56
SHPRH-204ENST00000417762 NUP160Q12769 1436 aa11.52□□□□□ -0.57
SHPRH-204ENST00000417762 CHGAP10645 457 aaKnown RBP11.51□□□□□ -0.57
SHPRH-204ENST00000417762 ARHGAP33O14559 1287 aa11.5□□□□□ -0.57
SHPRH-204ENST00000417762 CCER1Q8TC90 406 aaPredicted RBP11.5□□□□□ -0.57
SHPRH-204ENST00000417762 DNAJC5Q9H3Z4 198 aa11.5□□□□□ -0.57
SHPRH-204ENST00000417762 DISP1Q96F81 1524 aa11.5□□□□□ -0.57
SHPRH-204ENST00000417762 CEP170Q5SW79 1584 aa11.5□□□□□ -0.57
SHPRH-204ENST00000417762 DSG2Q14126 1118 aa11.49□□□□□ -0.57
SHPRH-204ENST00000417762 CCNB3Q8WWL7 1395 aa11.49□□□□□ -0.57
SHPRH-204ENST00000417762 JPH4Q96JJ6 628 aa11.48□□□□□ -0.57
SHPRH-204ENST00000417762 PHLDB1Q86UU1 1377 aa11.47□□□□□ -0.57
SHPRH-204ENST00000417762 KIAA0556O60303 1618 aa11.46□□□□□ -0.57
SHPRH-204ENST00000417762 TBC1D12O60347 775 aa11.46□□□□□ -0.57
SHPRH-204ENST00000417762 NKX1-1Q15270 411 aaPredicted RBP11.46□□□□□ -0.57
SHPRH-204ENST00000417762 ADGRD1Q6QNK2 874 aa11.46□□□□□ -0.57
SHPRH-204ENST00000417762 RYDENQ9NUL5 291 aaKnown RBP11.45□□□□□ -0.58
SHPRH-204ENST00000417762 CCDC18Q5T9S5 1454 aa11.44□□□□□ -0.58
SHPRH-204ENST00000417762 MTUS2Q5JR59 1369 aa11.44□□□□□ -0.58
SHPRH-204ENST00000417762 LRRIQ1Q96JM4 1722 aa11.44□□□□□ -0.58
SHPRH-204ENST00000417762 HECW1Q76N89 1606 aa11.43□□□□□ -0.58
SHPRH-204ENST00000417762 TK2O00142 265 aa11.43□□□□□ -0.58
SHPRH-204ENST00000417762 CARMIL2Q6F5E8 1435 aa11.43□□□□□ -0.58
SHPRH-204ENST00000417762 EPRSP07814 1512 aaKnown RBP11.42□□□□□ -0.58
SHPRH-204ENST00000417762 PPP4R3BQ5MIZ7 849 aa11.42□□□□□ -0.58
SHPRH-204ENST00000417762 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.41□□□□□ -0.58
SHPRH-204ENST00000417762 PSEN2P49810 448 aa11.4□□□□□ -0.58
SHPRH-204ENST00000417762 EHBP1L1Q8N3D4 1523 aa11.4□□□□□ -0.59
SHPRH-204ENST00000417762 DMRTA1Q5VZB9 504 aa11.39□□□□□ -0.59
SHPRH-204ENST00000417762 OXER1Q8TDS5 423 aa11.39□□□□□ -0.59
SHPRH-204ENST00000417762 CRISPLD2Q9H0B8 497 aa11.39□□□□□ -0.59
SHPRH-204ENST00000417762 MAGI3Q5TCQ9 1506 aa11.39□□□□□ -0.59
SHPRH-204ENST00000417762 NCOA2Q15596 1464 aa11.38□□□□□ -0.59
SHPRH-204ENST00000417762 FAM50AQ14320 339 aaKnown RBP11.38□□□□□ -0.59
SHPRH-204ENST00000417762 HCSTQ9UBK5 93 aa11.38□□□□□ -0.59
SHPRH-204ENST00000417762 NUP153P49790 1475 aaKnown RBP11.38□□□□□ -0.59
SHPRH-204ENST00000417762 ARHGEF11O15085 1522 aa11.37□□□□□ -0.59
SHPRH-204ENST00000417762 HRO43593 1189 aa11.37□□□□□ -0.59
SHPRH-204ENST00000417762 ITGAEP38570 1179 aa11.37□□□□□ -0.59
SHPRH-204ENST00000417762 RAPGEF6Q8TEU7 1601 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms