RNA–Protein interactions for RNA: ENST00000416982.1

LINC01287-201, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 2 BASIC

Gene LINC01287, Length 2,624 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-201ENST00000416982 KIF15Q9NS87 1388 aa13.71□□□□□ -0.21
LINC01287-201ENST00000416982 FAM9BQ8IZU0 186 aa13.71□□□□□ -0.22
LINC01287-201ENST00000416982 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.71□□□□□ -0.22
LINC01287-201ENST00000416982 GCC2Q8IWJ2 1684 aa13.7□□□□□ -0.22
LINC01287-201ENST00000416982 ARHGAP5Q13017 1502 aa13.7□□□□□ -0.22
LINC01287-201ENST00000416982 TTC37Q6PGP7 1564 aa13.7□□□□□ -0.22
LINC01287-201ENST00000416982 ITSN2Q9NZM3 1697 aa13.69□□□□□ -0.22
LINC01287-201ENST00000416982 NBPF8Q3BBV2 869 aa13.69□□□□□ -0.22
LINC01287-201ENST00000416982 MRS2Q9HD23 443 aa13.69□□□□□ -0.22
LINC01287-201ENST00000416982 EFCAB2Q5VUJ9 269 aa13.68□□□□□ -0.22
LINC01287-201ENST00000416982 PODXL2Q9NZ53 605 aa13.68□□□□□ -0.22
LINC01287-201ENST00000416982 PZPP20742 1482 aa13.67□□□□□ -0.22
LINC01287-201ENST00000416982 CCDC7Q96M83 1385 aa13.67□□□□□ -0.22
LINC01287-201ENST00000416982 POLR1AO95602 1720 aaPredicted RBP13.67□□□□□ -0.22
LINC01287-201ENST00000416982 SAMD9LQ8IVG5 1584 aa13.66□□□□□ -0.22
LINC01287-201ENST00000416982 SYCP2Q9BX26 1530 aa13.66□□□□□ -0.22
LINC01287-201ENST00000416982 NEFMP07197 916 aa13.66□□□□□ -0.22
LINC01287-201ENST00000416982 NUDCQ9Y266 331 aa13.65□□□□□ -0.22
LINC01287-201ENST00000416982 KDM2AQ9Y2K7 1162 aa13.65□□□□□ -0.22
LINC01287-201ENST00000416982 CDC42BPBQ9Y5S2 1711 aa13.65□□□□□ -0.22
LINC01287-201ENST00000416982 ARHGEF12Q9NZN5 1544 aa13.65□□□□□ -0.22
LINC01287-201ENST00000416982 ZCCHC11Q5TAX3 1644 aaKnown RBP13.64□□□□□ -0.23
LINC01287-201ENST00000416982 EIF4G2P78344 907 aaKnown RBP eCLIP13.64□□□□□ -0.23
LINC01287-201ENST00000416982 ADGRL2O95490 1459 aa13.64□□□□□ -0.23
LINC01287-201ENST00000416982 NPM1P06748 294 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC01287-201ENST00000416982 CYB5RLQ6IPT4 315 aa13.63□□□□□ -0.23
LINC01287-201ENST00000416982 TPRNQ4KMQ1 711 aa13.63□□□□□ -0.23
LINC01287-201ENST00000416982 RSPH4AQ5TD94 716 aa13.63□□□□□ -0.23
LINC01287-201ENST00000416982 CCDC141Q6ZP82 1450 aa13.63□□□□□ -0.23
LINC01287-201ENST00000416982 PLCH2O75038 1416 aa13.62□□□□□ -0.23
LINC01287-201ENST00000416982 AEBP2Q6ZN18 517 aaPredicted RBP13.62□□□□□ -0.23
LINC01287-201ENST00000416982 TRAPPC8Q9Y2L5 1435 aa13.62□□□□□ -0.23
LINC01287-201ENST00000416982 LAS1LQ9Y4W2 734 aaKnown RBP13.62□□□□□ -0.23
LINC01287-201ENST00000416982 RGL3Q3MIN7 710 aa13.62□□□□□ -0.23
LINC01287-201ENST00000416982 UHRF1BP1LA0JNW5 1464 aa13.61□□□□□ -0.23
LINC01287-201ENST00000416982 PPM1GO15355 546 aaPredicted RBP13.61□□□□□ -0.23
LINC01287-201ENST00000416982 BRPF3Q9ULD4 1205 aa13.6□□□□□ -0.23
LINC01287-201ENST00000416982 RPRD2Q5VT52 1461 aaKnown RBP13.59□□□□□ -0.23
LINC01287-201ENST00000416982 KIAA1107Q9UPP5 1409 aa13.59□□□□□ -0.23
LINC01287-201ENST00000416982 PREX2Q70Z35 1606 aa13.59□□□□□ -0.23
LINC01287-201ENST00000416982 PLEKHH2Q8IVE3 1493 aa13.59□□□□□ -0.23
LINC01287-201ENST00000416982 ASXL2Q76L83 1435 aa13.59□□□□□ -0.23
LINC01287-201ENST00000416982 SPAG9O60271 1321 aaKnown RBP13.58□□□□□ -0.24
LINC01287-201ENST00000416982 TCERG1O14776 1098 aaKnown RBP13.58□□□□□ -0.24
LINC01287-201ENST00000416982 CNGB1Q14028 1251 aaPredicted RBP13.58□□□□□ -0.24
LINC01287-201ENST00000416982 DCAF11Q8TEB1 546 aa13.58□□□□□ -0.24
LINC01287-201ENST00000416982 CROCC2H7BZ55 1655 aa13.57□□□□□ -0.24
LINC01287-201ENST00000416982 NPM2Q86SE8 214 aaKnown RBP13.57□□□□□ -0.24
LINC01287-201ENST00000416982 SHANK2Q9UPX8 1470 aa13.57□□□□□ -0.24
LINC01287-201ENST00000416982 WDR7Q9Y4E6 1490 aa13.57□□□□□ -0.24
LINC01287-201ENST00000416982 POLR3GLQ9BT43 218 aa13.56□□□□□ -0.24
LINC01287-201ENST00000416982 PDE4AP27815 886 aa13.56□□□□□ -0.24
LINC01287-201ENST00000416982 BACH2Q9BYV9 841 aa13.56□□□□□ -0.24
LINC01287-201ENST00000416982 ADGBQ8N7X0 1667 aa13.55□□□□□ -0.24
LINC01287-201ENST00000416982 GSE1Q14687 1217 aa13.55□□□□□ -0.24
LINC01287-201ENST00000416982 SPATA31E1Q6ZUB1 1445 aa13.55□□□□□ -0.24
LINC01287-201ENST00000416982 ARHGEF5Q12774 1597 aa13.55□□□□□ -0.24
LINC01287-201ENST00000416982 MS4A1P11836 297 aa13.54□□□□□ -0.24
LINC01287-201ENST00000416982 TEX14Q8IWB6 1497 aa13.54□□□□□ -0.24
LINC01287-201ENST00000416982 KIF7Q2M1P5 1343 aa13.54□□□□□ -0.24
LINC01287-201ENST00000416982 DHX29Q7Z478 1369 aaKnown RBP13.53□□□□□ -0.24
LINC01287-201ENST00000416982 SCAPERQ9BY12 1400 aa13.53□□□□□ -0.24
LINC01287-201ENST00000416982 MYO5CQ9NQX4 1742 aa13.52□□□□□ -0.24
LINC01287-201ENST00000416982 FANCAO15360 1455 aa13.52□□□□□ -0.24
LINC01287-201ENST00000416982 KIF3BO15066 747 aa13.52□□□□□ -0.25
LINC01287-201ENST00000416982 RAPGEF3O95398 923 aa13.5□□□□□ -0.25
LINC01287-201ENST00000416982 PHF23Q9BUL5 403 aaPredicted RBP13.5□□□□□ -0.25
LINC01287-201ENST00000416982 FAM135AQ9P2D6 1515 aa13.49□□□□□ -0.25
LINC01287-201ENST00000416982 PLEKHG5O94827 1062 aa13.48□□□□□ -0.25
LINC01287-201ENST00000416982 DNAJC5Q9H3Z4 198 aa13.48□□□□□ -0.25
LINC01287-201ENST00000416982 RRP1P56182 461 aaKnown RBP13.48□□□□□ -0.25
LINC01287-201ENST00000416982 NFKBIBQ15653 356 aa13.48□□□□□ -0.25
LINC01287-201ENST00000416982 RSPH6AQ9H0K4 717 aa13.48□□□□□ -0.25
LINC01287-201ENST00000416982 FRAT1Q92837 279 aaPredicted RBP13.47□□□□□ -0.25
LINC01287-201ENST00000416982 DDRGK1Q96HY6 314 aa13.47□□□□□ -0.25
LINC01287-201ENST00000416982 CARD11Q9BXL7 1154 aa13.47□□□□□ -0.25
LINC01287-201ENST00000416982 ADGRL1O94910 1474 aa13.47□□□□□ -0.25
LINC01287-201ENST00000416982 EXOC6Q8TAG9 804 aa13.47□□□□□ -0.25
LINC01287-201ENST00000416982 ABCC1P33527 1531 aa13.47□□□□□ -0.25
LINC01287-201ENST00000416982 NBPF1Q3BBV0 1214 aa13.46□□□□□ -0.25
LINC01287-201ENST00000416982 PLA2R1Q13018 1463 aa13.46□□□□□ -0.25
LINC01287-201ENST00000416982 CD109Q6YHK3 1445 aa13.46□□□□□ -0.25
LINC01287-201ENST00000416982 CCDC144AA2RUR9 1427 aa13.45□□□□□ -0.26
LINC01287-201ENST00000416982 FAM43AQ8N2R8 423 aa13.45□□□□□ -0.26
LINC01287-201ENST00000416982 PNISRQ8TF01 805 aaKnown RBP13.44□□□□□ -0.26
LINC01287-201ENST00000416982 GGT6Q6P531 493 aa13.44□□□□□ -0.26
LINC01287-201ENST00000416982 LRPPRCP42704 1394 aaKnown RBP13.44□□□□□ -0.26
LINC01287-201ENST00000416982 ST20-MTHFSA0A0A6YYL1 179 aa13.43□□□□□ -0.26
LINC01287-201ENST00000416982 BCORL1Q5H9F3 1711 aa13.43□□□□□ -0.26
LINC01287-201ENST00000416982 USP47Q96K76 1375 aa13.43□□□□□ -0.26
LINC01287-201ENST00000416982 DUOX2Q9NRD8 1548 aa13.42□□□□□ -0.26
LINC01287-201ENST00000416982 PKNOX2Q96KN3 472 aa13.41□□□□□ -0.26
LINC01287-201ENST00000416982 KDM5DQ9BY66 1539 aa13.4□□□□□ -0.26
LINC01287-201ENST00000416982 MAST1Q9Y2H9 1570 aa13.4□□□□□ -0.26
LINC01287-201ENST00000416982 FAM69CQ0P6D2 419 aa13.4□□□□□ -0.26
LINC01287-201ENST00000416982 ERBINQ96RT1 1412 aa13.39□□□□□ -0.27
LINC01287-201ENST00000416982 SENP3Q9H4L4 574 aaPredicted RBP13.39□□□□□ -0.27
LINC01287-201ENST00000416982 ABCA9Q8IUA7 1624 aa13.39□□□□□ -0.27
LINC01287-201ENST00000416982 RCAN3Q9UKA8 241 aa13.38□□□□□ -0.27
LINC01287-201ENST00000416982 ROCK2O75116 1388 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms