RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 IRX6P78412 446 aaPredicted RBP13.63□□□□□ -0.23
LINC00494-201ENST00000416742 ZCCHC11Q5TAX3 1644 aaKnown RBP13.63□□□□□ -0.23
LINC00494-201ENST00000416742 SPAG9O60271 1321 aaKnown RBP13.63□□□□□ -0.23
LINC00494-201ENST00000416742 RALGAPBQ86X10 1494 aa13.63□□□□□ -0.23
LINC00494-201ENST00000416742 NBPF1Q3BBV0 1214 aa13.62□□□□□ -0.23
LINC00494-201ENST00000416742 TRAPPC8Q9Y2L5 1435 aa13.62□□□□□ -0.23
LINC00494-201ENST00000416742 BCORL1Q5H9F3 1711 aa13.62□□□□□ -0.23
LINC00494-201ENST00000416742 KDM5CP41229 1560 aa13.61□□□□□ -0.23
LINC00494-201ENST00000416742 UHRF1BP1LA0JNW5 1464 aa13.6□□□□□ -0.23
LINC00494-201ENST00000416742 SENP3-EIF4A1A0A087X0R7 540 aa13.6□□□□□ -0.23
LINC00494-201ENST00000416742 MAST1Q9Y2H9 1570 aa13.6□□□□□ -0.23
LINC00494-201ENST00000416742 ARID4BQ4LE39 1312 aaPredicted RBP13.59□□□□□ -0.23
LINC00494-201ENST00000416742 DHX29Q7Z478 1369 aaKnown RBP13.59□□□□□ -0.23
LINC00494-201ENST00000416742 PLA2R1Q13018 1463 aa13.59□□□□□ -0.23
LINC00494-201ENST00000416742 DUOX2Q9NRD8 1548 aa13.58□□□□□ -0.24
LINC00494-201ENST00000416742 TSHZ2Q9NRE2 1034 aa13.57□□□□□ -0.24
LINC00494-201ENST00000416742 POLR1AO95602 1720 aaPredicted RBP13.57□□□□□ -0.24
LINC00494-201ENST00000416742 TMC1Q8TDI8 760 aa13.57□□□□□ -0.24
LINC00494-201ENST00000416742 UNC13BO14795 1591 aa13.55□□□□□ -0.24
LINC00494-201ENST00000416742 PRAG1Q86YV5 1406 aa13.55□□□□□ -0.24
LINC00494-201ENST00000416742 PLXNC1O60486 1568 aa13.55□□□□□ -0.24
LINC00494-201ENST00000416742 ERBINQ96RT1 1412 aa13.55□□□□□ -0.24
LINC00494-201ENST00000416742 ABCC1P33527 1531 aa13.54□□□□□ -0.24
LINC00494-201ENST00000416742 KIF3BO15066 747 aa13.54□□□□□ -0.24
LINC00494-201ENST00000416742 NPM1P06748 294 aaKnown RBP eCLIP13.54□□□□□ -0.24
LINC00494-201ENST00000416742 A2MP01023 1474 aa13.54□□□□□ -0.24
LINC00494-201ENST00000416742 ZBED9Q6R2W3 1325 aa13.54□□□□□ -0.24
LINC00494-201ENST00000416742 WDR7Q9Y4E6 1490 aa13.52□□□□□ -0.24
LINC00494-201ENST00000416742 IQGAP3Q86VI3 1631 aa13.52□□□□□ -0.25
LINC00494-201ENST00000416742 SCAPERQ9BY12 1400 aa13.51□□□□□ -0.25
LINC00494-201ENST00000416742 FANCAO15360 1455 aa13.51□□□□□ -0.25
LINC00494-201ENST00000416742 OSCARQ8IYS5 282 aa13.5□□□□□ -0.25
LINC00494-201ENST00000416742 PNISRQ8TF01 805 aaKnown RBP13.49□□□□□ -0.25
LINC00494-201ENST00000416742 RTEL1-TNFRSF6BF6WH68 1400 aa13.48□□□□□ -0.25
LINC00494-201ENST00000416742 ASXL2Q76L83 1435 aa13.48□□□□□ -0.25
LINC00494-201ENST00000416742 RALBP1Q15311 655 aa13.48□□□□□ -0.25
LINC00494-201ENST00000416742 KANK1Q14678 1352 aa13.48□□□□□ -0.25
LINC00494-201ENST00000416742 TRPM1Q7Z4N2 1603 aa13.47□□□□□ -0.25
LINC00494-201ENST00000416742 TMF1P82094 1093 aa13.47□□□□□ -0.25
LINC00494-201ENST00000416742 ADGRL1O94910 1474 aa13.47□□□□□ -0.25
LINC00494-201ENST00000416742 CC2D1BQ5T0F9 858 aaKnown RBP13.47□□□□□ -0.25
LINC00494-201ENST00000416742 MAGI2Q86UL8 1455 aa13.47□□□□□ -0.25
LINC00494-201ENST00000416742 TESK2Q96S53 571 aa13.47□□□□□ -0.25
LINC00494-201ENST00000416742 MYBBP1AQ9BQG0 1328 aaKnown RBP13.47□□□□□ -0.25
LINC00494-201ENST00000416742 GPRASP1Q5JY77 1395 aa13.46□□□□□ -0.26
LINC00494-201ENST00000416742 PANK3Q9H999 370 aa13.46□□□□□ -0.26
LINC00494-201ENST00000416742 SALL2Q9Y467 1007 aaPredicted RBP13.46□□□□□ -0.26
LINC00494-201ENST00000416742 DISP3Q9P2K9 1392 aa13.45□□□□□ -0.26
LINC00494-201ENST00000416742 ATP10AO60312 1499 aa13.45□□□□□ -0.26
LINC00494-201ENST00000416742 ZFYVE16Q7Z3T8 1539 aa13.45□□□□□ -0.26
LINC00494-201ENST00000416742 KTN1Q86UP2 1357 aaKnown RBP13.44□□□□□ -0.26
LINC00494-201ENST00000416742 ARAP3Q8WWN8 1544 aa13.44□□□□□ -0.26
LINC00494-201ENST00000416742 ATP7AQ04656 1500 aa13.43□□□□□ -0.26
LINC00494-201ENST00000416742 CHGAP10645 457 aaKnown RBP13.42□□□□□ -0.26
LINC00494-201ENST00000416742 BRD4O60885 1362 aaPredicted RBP13.42□□□□□ -0.26
LINC00494-201ENST00000416742 PER1O15534 1290 aaPredicted RBP13.42□□□□□ -0.26
LINC00494-201ENST00000416742 PPP4R2Q9NY27 417 aa13.42□□□□□ -0.26
LINC00494-201ENST00000416742 E9PCH4 1651 aa13.41□□□□□ -0.26
LINC00494-201ENST00000416742 NLRP13Q86W25 1043 aa13.41□□□□□ -0.26
LINC00494-201ENST00000416742 NUDCQ9Y266 331 aa13.41□□□□□ -0.26
LINC00494-201ENST00000416742 GGT6Q6P531 493 aa13.41□□□□□ -0.26
LINC00494-201ENST00000416742 ABCA9Q8IUA7 1624 aa13.4□□□□□ -0.26
LINC00494-201ENST00000416742 B4GALNT3Q6L9W6 998 aa13.4□□□□□ -0.26
LINC00494-201ENST00000416742 EIF2AK4Q9P2K8 1649 aaKnown RBP13.4□□□□□ -0.27
LINC00494-201ENST00000416742 COL17A1Q9UMD9 1497 aaPredicted RBP13.39□□□□□ -0.27
LINC00494-201ENST00000416742 PRDM15P57071 1507 aaPredicted RBP13.39□□□□□ -0.27
LINC00494-201ENST00000416742 ERICH6BQ5W0A0 696 aa13.39□□□□□ -0.27
LINC00494-201ENST00000416742 CFAP70Q5T0N1 1121 aa13.38□□□□□ -0.27
LINC00494-201ENST00000416742 PTPRTO14522 1441 aa13.38□□□□□ -0.27
LINC00494-201ENST00000416742 CD109Q6YHK3 1445 aa13.38□□□□□ -0.27
LINC00494-201ENST00000416742 SMG6Q86US8 1419 aaKnown RBP13.37□□□□□ -0.27
LINC00494-201ENST00000416742 RBM19Q9Y4C8 960 aaKnown RBP13.37□□□□□ -0.27
LINC00494-201ENST00000416742 TRPM2O94759 1503 aa13.37□□□□□ -0.27
LINC00494-201ENST00000416742 PARD3Q8TEW0 1356 aa13.37□□□□□ -0.27
LINC00494-201ENST00000416742 STAC3Q96MF2 364 aa13.36□□□□□ -0.27
LINC00494-201ENST00000416742 KNSTRNQ9Y448 316 aa13.36□□□□□ -0.27
LINC00494-201ENST00000416742 INO80Q9ULG1 1556 aaPredicted RBP13.36□□□□□ -0.27
LINC00494-201ENST00000416742 CLTCL1P53675 1640 aa13.36□□□□□ -0.27
LINC00494-201ENST00000416742 LRPPRCP42704 1394 aaKnown RBP13.35□□□□□ -0.27
LINC00494-201ENST00000416742 SPHKAPQ2M3C7 1700 aa13.35□□□□□ -0.27
LINC00494-201ENST00000416742 ADGRF5Q8IZF2 1346 aa13.34□□□□□ -0.27
LINC00494-201ENST00000416742 TET3O43151 1660 aa13.34□□□□□ -0.27
LINC00494-201ENST00000416742 RAPGEF3O95398 923 aa13.34□□□□□ -0.27
LINC00494-201ENST00000416742 CDCA8Q53HL2 280 aa13.34□□□□□ -0.27
LINC00494-201ENST00000416742 LAMC1P11047 1609 aa13.34□□□□□ -0.27
LINC00494-201ENST00000416742 WASHC2CQ9Y4E1 1318 aa13.34□□□□□ -0.27
LINC00494-201ENST00000416742 UGGT1Q9NYU2 1555 aa13.34□□□□□ -0.27
LINC00494-201ENST00000416742 ZNF518AQ6AHZ1 1483 aa13.33□□□□□ -0.28
LINC00494-201ENST00000416742 DEPDC5O75140 1603 aa13.32□□□□□ -0.28
LINC00494-201ENST00000416742 SCAF11Q99590 1463 aaKnown RBP13.32□□□□□ -0.28
LINC00494-201ENST00000416742 MADDQ8WXG6 1647 aa13.32□□□□□ -0.28
LINC00494-201ENST00000416742 CFAP65Q6ZU64 1925 aaKnown RBP13.31□□□□□ -0.28
LINC00494-201ENST00000416742 CEP152O94986 1710 aa13.31□□□□□ -0.28
LINC00494-201ENST00000416742 KIDINS220Q9ULH0 1771 aa13.31□□□□□ -0.28
LINC00494-201ENST00000416742 VWDEQ8N2E2 1590 aa13.3□□□□□ -0.28
LINC00494-201ENST00000416742 EIF3AQ14152 1382 aaKnown RBP13.3□□□□□ -0.28
LINC00494-201ENST00000416742 RNF17Q9BXT8 1623 aaKnown RBP13.29□□□□□ -0.28
LINC00494-201ENST00000416742 CYB5RLQ6IPT4 315 aa13.29□□□□□ -0.28
LINC00494-201ENST00000416742 SENP3Q9H4L4 574 aaPredicted RBP13.29□□□□□ -0.28
LINC00494-201ENST00000416742 NUTM2DQ5VT03 806 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms