RNA–Protein interactions for RNA: ENST00000416690.5

GTF3C3-203, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 326 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-203ENST00000416690 LAPTM4BQ86VI4 370 aa5.42□□□□□ -1.54
GTF3C3-203ENST00000416690 SOWAHBA6NEL2 793 aa5.41□□□□□ -1.54
GTF3C3-203ENST00000416690 PHF14O94880 888 aa5.41□□□□□ -1.54
GTF3C3-203ENST00000416690 BCAMP50895 628 aa5.41□□□□□ -1.54
GTF3C3-203ENST00000416690 TYW1BQ6NUM6 668 aa5.41□□□□□ -1.54
GTF3C3-203ENST00000416690 FBXW7Q969H0 707 aa5.41□□□□□ -1.54
GTF3C3-203ENST00000416690 ONECUT3O60422 494 aaPredicted RBP5.4□□□□□ -1.54
GTF3C3-203ENST00000416690 ZFRQ96KR1 1074 aaKnown RBP5.4□□□□□ -1.54
GTF3C3-203ENST00000416690 KIAA1468Q9P260 1216 aa5.4□□□□□ -1.54
GTF3C3-203ENST00000416690 NYAP1Q6ZVC0 841 aa5.39□□□□□ -1.55
GTF3C3-203ENST00000416690 KCNC4Q03721 635 aa5.38□□□□□ -1.55
GTF3C3-203ENST00000416690 EPAS1Q99814 870 aa5.38□□□□□ -1.55
GTF3C3-203ENST00000416690 WBP1LQ9NX94 342 aa5.38□□□□□ -1.55
GTF3C3-203ENST00000416690 C6orf132Q5T0Z8 1188 aa5.37□□□□□ -1.55
GTF3C3-203ENST00000416690 Q6ZNB5 142 aa5.37□□□□□ -1.55
GTF3C3-203ENST00000416690 CADPS2Q86UW7 1296 aa5.36□□□□□ -1.55
GTF3C3-203ENST00000416690 SEPT9Q9UHD8 586 aaPredicted RBP5.36□□□□□ -1.55
GTF3C3-203ENST00000416690 TRIM6-TRIM34B2RNG4 842 aa5.35□□□□□ -1.55
GTF3C3-203ENST00000416690 FAM98CQ17RN3 349 aaKnown RBP5.35□□□□□ -1.55
GTF3C3-203ENST00000416690 CAMK2BQ13554 666 aa5.34□□□□□ -1.55
GTF3C3-203ENST00000416690 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.34□□□□□ -1.55
GTF3C3-203ENST00000416690 TSR3Q9UJK0 312 aaKnown RBP5.34□□□□□ -1.55
GTF3C3-203ENST00000416690 HPS5Q9UPZ3 1129 aa5.33□□□□□ -1.56
GTF3C3-203ENST00000416690 DPYSL4O14531 572 aa5.32□□□□□ -1.56
GTF3C3-203ENST00000416690 RBM33Q96EV2 1170 aaKnown RBP5.32□□□□□ -1.56
GTF3C3-203ENST00000416690 LRCH3Q96II8 777 aa5.32□□□□□ -1.56
GTF3C3-203ENST00000416690 LAPTM4AQ15012 233 aa5.31□□□□□ -1.56
GTF3C3-203ENST00000416690 DDX12PQ92771 950 aa5.31□□□□□ -1.56
GTF3C3-203ENST00000416690 PACS2Q86VP3 889 aa5.3□□□□□ -1.56
GTF3C3-203ENST00000416690 TSKSQ9UJT2 592 aa5.3□□□□□ -1.56
GTF3C3-203ENST00000416690 GFRA3O60609 400 aa5.29□□□□□ -1.56
GTF3C3-203ENST00000416690 PPP4CP60510 307 aa5.29□□□□□ -1.56
GTF3C3-203ENST00000416690 TRAF7Q6Q0C0 670 aa5.29□□□□□ -1.56
GTF3C3-203ENST00000416690 LCE2BO14633 110 aa5.28□□□□□ -1.56
GTF3C3-203ENST00000416690 DCAF8L2P0C7V8 631 aa5.28□□□□□ -1.56
GTF3C3-203ENST00000416690 EN1Q05925 392 aaPredicted RBP5.28□□□□□ -1.56
GTF3C3-203ENST00000416690 TJAP1Q5JTD0 557 aa5.28□□□□□ -1.56
GTF3C3-203ENST00000416690 NBR1Q14596 966 aa5.27□□□□□ -1.57
GTF3C3-203ENST00000416690 TSR1Q2NL82 804 aaKnown RBP5.27□□□□□ -1.57
GTF3C3-203ENST00000416690 MAP3K7O43318 606 aa5.26□□□□□ -1.57
GTF3C3-203ENST00000416690 SAMD7Q7Z3H4 446 aa5.26□□□□□ -1.57
GTF3C3-203ENST00000416690 PRKD2Q9BZL6 878 aa5.26□□□□□ -1.57
GTF3C3-203ENST00000416690 FAM198AQ9UFP1 575 aa5.26□□□□□ -1.57
GTF3C3-203ENST00000416690 SMAPO00193 183 aa5.25□□□□□ -1.57
GTF3C3-203ENST00000416690 NRG2O14511 850 aaPredicted RBP5.25□□□□□ -1.57
GTF3C3-203ENST00000416690 PDIA6Q15084 440 aa5.25□□□□□ -1.57
GTF3C3-203ENST00000416690 PPP1R18Q6NYC8 613 aa5.25□□□□□ -1.57
GTF3C3-203ENST00000416690 CDCA7LQ96GN5 454 aa5.25□□□□□ -1.57
GTF3C3-203ENST00000416690 IL21Q9HBE4 155 aa5.25□□□□□ -1.57
GTF3C3-203ENST00000416690 SPDYE16A6NNV3 312 aaPredicted RBP5.24□□□□□ -1.57
GTF3C3-203ENST00000416690 PRSS12P56730 875 aa5.24□□□□□ -1.57
GTF3C3-203ENST00000416690 MTRQ99707 1265 aa5.24□□□□□ -1.57
GTF3C3-203ENST00000416690 V9GY48 417 aaPredicted RBP5.24□□□□□ -1.57
GTF3C3-203ENST00000416690 C3orf80F5H4A9 247 aa5.23□□□□□ -1.57
GTF3C3-203ENST00000416690 CERKQ8TCT0 537 aa5.23□□□□□ -1.57
GTF3C3-203ENST00000416690 ZNF516Q92618 1163 aa5.23□□□□□ -1.57
GTF3C3-203ENST00000416690 TATDN2Q93075 761 aa5.23□□□□□ -1.57
GTF3C3-203ENST00000416690 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.23□□□□□ -1.57
GTF3C3-203ENST00000416690 PNMA3Q9UL41 463 aa5.22□□□□□ -1.57
GTF3C3-203ENST00000416690 NBPF26B4DH59 902 aa5.21□□□□□ -1.58
GTF3C3-203ENST00000416690 PRIM1P49642 420 aaKnown RBP5.21□□□□□ -1.58
GTF3C3-203ENST00000416690 HDGFP51858 240 aaKnown RBP5.21□□□□□ -1.58
GTF3C3-203ENST00000416690 APLP1P51693 650 aa5.2□□□□□ -1.58
GTF3C3-203ENST00000416690 NUDT18Q6ZVK8 323 aa5.2□□□□□ -1.58
GTF3C3-203ENST00000416690 GRXCR2A6NFK2 248 aa5.19□□□□□ -1.58
GTF3C3-203ENST00000416690 NKX2-3Q8TAU0 364 aa5.19□□□□□ -1.58
GTF3C3-203ENST00000416690 RNF40O75150 1001 aa5.18□□□□□ -1.58
GTF3C3-203ENST00000416690 ZNF787Q6DD87 383 aa5.18□□□□□ -1.58
GTF3C3-203ENST00000416690 RBM27Q9P2N5 1060 aaKnown RBP5.18□□□□□ -1.58
GTF3C3-203ENST00000416690 PDZRN3Q9UPQ7 1066 aa5.18□□□□□ -1.58
GTF3C3-203ENST00000416690 ARIH1Q9Y4X5 557 aaPredicted RBP5.18□□□□□ -1.58
GTF3C3-203ENST00000416690 OSBPP22059 807 aa5.17□□□□□ -1.58
GTF3C3-203ENST00000416690 E2F4Q16254 413 aa5.17□□□□□ -1.58
GTF3C3-203ENST00000416690 BBXQ8WY36 941 aaPredicted RBP5.17□□□□□ -1.58
GTF3C3-203ENST00000416690 NECTIN2Q92692 538 aa5.17□□□□□ -1.58
GTF3C3-203ENST00000416690 CDHR5Q9HBB8 845 aa5.17□□□□□ -1.58
GTF3C3-203ENST00000416690 GGCXP38435 758 aa5.16□□□□□ -1.58
GTF3C3-203ENST00000416690 SWT1Q5T5J6 900 aaKnown RBP5.16□□□□□ -1.58
GTF3C3-203ENST00000416690 TMUB1Q9BVT8 246 aa5.16□□□□□ -1.58
GTF3C3-203ENST00000416690 COPS2P61201 443 aa5.15□□□□□ -1.59
GTF3C3-203ENST00000416690 SLF2Q8IX21 1173 aa5.15□□□□□ -1.59
GTF3C3-203ENST00000416690 TTC13Q8NBP0 860 aa5.15□□□□□ -1.59
GTF3C3-203ENST00000416690 ZPR1O75312 459 aa5.14□□□□□ -1.59
GTF3C3-203ENST00000416690 ZNF775Q96BV0 537 aaPredicted RBP5.14□□□□□ -1.59
GTF3C3-203ENST00000416690 NPDC1Q9NQX5 325 aaPredicted RBP5.14□□□□□ -1.59
GTF3C3-203ENST00000416690 PADI6Q6TGC4 694 aa5.13□□□□□ -1.59
GTF3C3-203ENST00000416690 SPRYD3Q8NCJ5 442 aa5.13□□□□□ -1.59
GTF3C3-203ENST00000416690 WDR70Q9NW82 654 aa5.13□□□□□ -1.59
GTF3C3-203ENST00000416690 TRIM67Q6ZTA4 783 aa5.12□□□□□ -1.59
GTF3C3-203ENST00000416690 EYA1Q99502 592 aa5.12□□□□□ -1.59
GTF3C3-203ENST00000416690 SLC19A1P41440 591 aa5.11□□□□□ -1.59
GTF3C3-203ENST00000416690 PRR14Q9BWN1 585 aa5.11□□□□□ -1.59
GTF3C3-203ENST00000416690 PCDHB3Q9Y5E6 796 aa5.11□□□□□ -1.59
GTF3C3-203ENST00000416690 RNF223E7ERA6 249 aa5.1□□□□□ -1.59
GTF3C3-203ENST00000416690 SLC4A3P48751 1232 aa5.1□□□□□ -1.59
GTF3C3-203ENST00000416690 EMID1Q96A84 441 aaPredicted RBP5.1□□□□□ -1.59
GTF3C3-203ENST00000416690 DGAT1O75907 488 aa5.09□□□□□ -1.59
GTF3C3-203ENST00000416690 MYT1Q01538 1121 aa5.09□□□□□ -1.59
GTF3C3-203ENST00000416690 SPRYD7Q5W111 196 aa5.09□□□□□ -1.59
GTF3C3-203ENST00000416690 BLOC1S3Q6QNY0 202 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms