RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 MRPL50Q8N5N7 158 aaKnown RBP6.77□□□□□ -1.33
APP-207ENST00000415997 ZDHHC16Q969W1 377 aa6.77□□□□□ -1.33
APP-207ENST00000415997 ADAM33Q9BZ11 813 aa6.77□□□□□ -1.33
APP-207ENST00000415997 WNT2BQ93097 391 aa6.76□□□□□ -1.33
APP-207ENST00000415997 ARHGEF11O15085 1522 aa6.76□□□□□ -1.33
APP-207ENST00000415997 SMARCA2P51531 1590 aa6.75□□□□□ -1.33
APP-207ENST00000415997 JPH4Q96JJ6 628 aa6.75□□□□□ -1.33
APP-207ENST00000415997 ZBED2Q9BTP6 218 aa6.75□□□□□ -1.33
APP-207ENST00000415997 ANO8Q9HCE9 1232 aaPredicted RBP6.75□□□□□ -1.33
APP-207ENST00000415997 BHMG1C9JSJ3 638 aaPredicted RBP6.73□□□□□ -1.33
APP-207ENST00000415997 THSD4Q6ZMP0 1018 aa6.73□□□□□ -1.33
APP-207ENST00000415997 SLC4A5Q9BY07 1137 aa6.73□□□□□ -1.33
APP-207ENST00000415997 EMILIN3Q9NT22 766 aa6.73□□□□□ -1.33
APP-207ENST00000415997 ZCCHC6Q5VYS8 1495 aaKnown RBP6.73□□□□□ -1.33
APP-207ENST00000415997 CADPS2Q86UW7 1296 aa6.72□□□□□ -1.33
APP-207ENST00000415997 NBPF3Q9H094 633 aa6.72□□□□□ -1.33
APP-207ENST00000415997 LAMC3Q9Y6N6 1575 aa6.72□□□□□ -1.33
APP-207ENST00000415997 KIF21AQ7Z4S6 1674 aa6.71□□□□□ -1.33
APP-207ENST00000415997 WDR62O43379 1518 aa6.71□□□□□ -1.33
APP-207ENST00000415997 HMGXB3Q12766 1538 aa6.71□□□□□ -1.33
APP-207ENST00000415997 PROX2Q3B8N5 592 aa6.71□□□□□ -1.34
APP-207ENST00000415997 PCDHGA10Q9Y5H3 936 aa6.71□□□□□ -1.34
APP-207ENST00000415997 ATAD2BQ9ULI0 1458 aa6.71□□□□□ -1.34
APP-207ENST00000415997 MFSD10Q14728 455 aa6.7□□□□□ -1.34
APP-207ENST00000415997 COL9A1P20849 921 aa6.69□□□□□ -1.34
APP-207ENST00000415997 PDS5BQ9NTI5 1447 aa6.68□□□□□ -1.34
APP-207ENST00000415997 RBM33Q96EV2 1170 aaKnown RBP6.68□□□□□ -1.34
APP-207ENST00000415997 MRC2Q9UBG0 1479 aa6.67□□□□□ -1.34
APP-207ENST00000415997 PPP1R3GB7ZBB8 358 aa6.67□□□□□ -1.34
APP-207ENST00000415997 TYW1BQ6NUM6 668 aa6.67□□□□□ -1.34
APP-207ENST00000415997 ANKK1Q8NFD2 765 aa6.67□□□□□ -1.34
APP-207ENST00000415997 DPYSL4O14531 572 aa6.66□□□□□ -1.34
APP-207ENST00000415997 BCAMP50895 628 aa6.66□□□□□ -1.34
APP-207ENST00000415997 CYB5RLQ6IPT4 315 aa6.66□□□□□ -1.34
APP-207ENST00000415997 FBXW7Q969H0 707 aa6.66□□□□□ -1.34
APP-207ENST00000415997 KIAA1468Q9P260 1216 aa6.66□□□□□ -1.34
APP-207ENST00000415997 RABGEF1Q9UJ41 708 aa6.66□□□□□ -1.34
APP-207ENST00000415997 ARAP1Q96P48 1450 aa6.66□□□□□ -1.34
APP-207ENST00000415997 PHF14O94880 888 aa6.65□□□□□ -1.34
APP-207ENST00000415997 DDX12PQ92771 950 aa6.65□□□□□ -1.34
APP-207ENST00000415997 SEPT9Q9UHD8 586 aaPredicted RBP6.65□□□□□ -1.34
APP-207ENST00000415997 C6orf132Q5T0Z8 1188 aa6.63□□□□□ -1.35
APP-207ENST00000415997 A0A0G2JS52 829 aa6.62□□□□□ -1.35
APP-207ENST00000415997 ZFRQ96KR1 1074 aaKnown RBP6.62□□□□□ -1.35
APP-207ENST00000415997 IRX2Q9BZI1 471 aaPredicted RBP6.62□□□□□ -1.35
APP-207ENST00000415997 EPAS1Q99814 870 aa6.61□□□□□ -1.35
APP-207ENST00000415997 SOWAHBA6NEL2 793 aa6.6□□□□□ -1.35
APP-207ENST00000415997 IFFO2Q5TF58 517 aa6.6□□□□□ -1.35
APP-207ENST00000415997 WBP1LQ9NX94 342 aa6.6□□□□□ -1.35
APP-207ENST00000415997 LAPTM4BQ86VI4 370 aa6.59□□□□□ -1.35
APP-207ENST00000415997 TRIM6-TRIM34B2RNG4 842 aa6.58□□□□□ -1.36
APP-207ENST00000415997 MAP3K7O43318 606 aa6.58□□□□□ -1.36
APP-207ENST00000415997 RGS20O76081 388 aa6.58□□□□□ -1.36
APP-207ENST00000415997 CAMK2BQ13554 666 aa6.58□□□□□ -1.36
APP-207ENST00000415997 NBR1Q14596 966 aa6.58□□□□□ -1.36
APP-207ENST00000415997 BBXQ8WY36 941 aaPredicted RBP6.57□□□□□ -1.36
APP-207ENST00000415997 HPS5Q9UPZ3 1129 aa6.57□□□□□ -1.36
APP-207ENST00000415997 BAZ1BQ9UIG0 1483 aaKnown RBP6.56□□□□□ -1.36
APP-207ENST00000415997 KCNC4Q03721 635 aa6.56□□□□□ -1.36
APP-207ENST00000415997 FAM98CQ17RN3 349 aaKnown RBP6.56□□□□□ -1.36
APP-207ENST00000415997 TSR1Q2NL82 804 aaKnown RBP6.56□□□□□ -1.36
APP-207ENST00000415997 LRCH3Q96II8 777 aa6.56□□□□□ -1.36
APP-207ENST00000415997 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.56□□□□□ -1.36
APP-207ENST00000415997 RSF1Q96T23 1441 aaPredicted RBP6.56□□□□□ -1.36
APP-207ENST00000415997 CADPSQ9ULU8 1353 aa6.56□□□□□ -1.36
APP-207ENST00000415997 ONECUT3O60422 494 aaPredicted RBP6.55□□□□□ -1.36
APP-207ENST00000415997 PACS2Q86VP3 889 aa6.55□□□□□ -1.36
APP-207ENST00000415997 PEG3Q9GZU2 1588 aa6.54□□□□□ -1.36
APP-207ENST00000415997 GRXCR2A6NFK2 248 aa6.54□□□□□ -1.36
APP-207ENST00000415997 SMAPO00193 183 aa6.54□□□□□ -1.36
APP-207ENST00000415997 ITGBL1O95965 494 aaPredicted RBP6.54□□□□□ -1.36
APP-207ENST00000415997 SPRYD3Q8NCJ5 442 aa6.54□□□□□ -1.36
APP-207ENST00000415997 TSR3Q9UJK0 312 aaKnown RBP6.54□□□□□ -1.36
APP-207ENST00000415997 PPP4CP60510 307 aa6.53□□□□□ -1.36
APP-207ENST00000415997 EN1Q05925 392 aaPredicted RBP6.53□□□□□ -1.36
APP-207ENST00000415997 CFAP44Q96MT7 982 aa6.53□□□□□ -1.36
APP-207ENST00000415997 WDR70Q9NW82 654 aa6.53□□□□□ -1.36
APP-207ENST00000415997 TSKSQ9UJT2 592 aa6.53□□□□□ -1.36
APP-207ENST00000415997 SMARCA4P51532 1647 aa6.53□□□□□ -1.36
APP-207ENST00000415997 Q6ZNB5 142 aa6.52□□□□□ -1.37
APP-207ENST00000415997 NYAP1Q6ZVC0 841 aa6.52□□□□□ -1.37
APP-207ENST00000415997 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.52□□□□□ -1.37
APP-207ENST00000415997 RNF40O75150 1001 aa6.51□□□□□ -1.37
APP-207ENST00000415997 CDCA7LQ96GN5 454 aa6.51□□□□□ -1.37
APP-207ENST00000415997 CEP164Q9UPV0 1460 aa6.51□□□□□ -1.37
APP-207ENST00000415997 SPDYE16A6NNV3 312 aaPredicted RBP6.5□□□□□ -1.37
APP-207ENST00000415997 PDIA6Q15084 440 aa6.5□□□□□ -1.37
APP-207ENST00000415997 E2F4Q16254 413 aa6.5□□□□□ -1.37
APP-207ENST00000415997 PAXIP1Q6ZW49 1069 aaPredicted RBP6.5□□□□□ -1.37
APP-207ENST00000415997 SAMD7Q7Z3H4 446 aa6.5□□□□□ -1.37
APP-207ENST00000415997 PRSS12P56730 875 aa6.49□□□□□ -1.37
APP-207ENST00000415997 PNMA3Q9UL41 463 aa6.49□□□□□ -1.37
APP-207ENST00000415997 ZNF608Q9ULD9 1512 aaPredicted RBP6.49□□□□□ -1.37
APP-207ENST00000415997 PRIM1P49642 420 aaKnown RBP6.48□□□□□ -1.37
APP-207ENST00000415997 FAM198AQ9UFP1 575 aa6.48□□□□□ -1.37
APP-207ENST00000415997 URB2Q14146 1524 aaKnown RBP6.48□□□□□ -1.37
APP-207ENST00000415997 C3orf80F5H4A9 247 aa6.47□□□□□ -1.37
APP-207ENST00000415997 HDGFP51858 240 aaKnown RBP6.47□□□□□ -1.37
APP-207ENST00000415997 TATDN2Q93075 761 aa6.47□□□□□ -1.37
APP-207ENST00000415997 FANCD2Q9BXW9 1451 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms