RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 SMARCA2P51531 1590 aa11.13□□□□□ -0.63
CSTF1-202ENST00000415828 DPYSL4O14531 572 aa11.13□□□□□ -0.63
CSTF1-202ENST00000415828 PTGER2P43116 358 aa11.13□□□□□ -0.63
CSTF1-202ENST00000415828 JPH4Q96JJ6 628 aa11.13□□□□□ -0.63
CSTF1-202ENST00000415828 ADGRD1Q6QNK2 874 aa11.12□□□□□ -0.63
CSTF1-202ENST00000415828 KCNH8Q96L42 1107 aa11.1□□□□□ -0.63
CSTF1-202ENST00000415828 BCL2L12Q9HB09 334 aa11.1□□□□□ -0.63
CSTF1-202ENST00000415828 ZDHHC16Q969W1 377 aa11.09□□□□□ -0.63
CSTF1-202ENST00000415828 WDR70Q9NW82 654 aa11.09□□□□□ -0.63
CSTF1-202ENST00000415828 ADAM33Q9BZ11 813 aa11.07□□□□□ -0.64
CSTF1-202ENST00000415828 PCDHGA10Q9Y5H3 936 aa11.07□□□□□ -0.64
CSTF1-202ENST00000415828 TK2O00142 265 aa11.06□□□□□ -0.64
CSTF1-202ENST00000415828 PTPREP23469 700 aa11.06□□□□□ -0.64
CSTF1-202ENST00000415828 E2F4Q16254 413 aa11.05□□□□□ -0.64
CSTF1-202ENST00000415828 ARHGEF11O15085 1522 aa11.04□□□□□ -0.64
CSTF1-202ENST00000415828 HRO43593 1189 aa11.03□□□□□ -0.64
CSTF1-202ENST00000415828 PHF14O94880 888 aa11.02□□□□□ -0.65
CSTF1-202ENST00000415828 VPS9D1Q9Y2B5 631 aa11.02□□□□□ -0.65
CSTF1-202ENST00000415828 TYW1BQ6NUM6 668 aa11.01□□□□□ -0.65
CSTF1-202ENST00000415828 DDX12PQ92771 950 aa11.01□□□□□ -0.65
CSTF1-202ENST00000415828 FBXW7Q969H0 707 aa11□□□□□ -0.65
CSTF1-202ENST00000415828 SLC24A1O60721 1099 aa10.99□□□□□ -0.65
CSTF1-202ENST00000415828 PDIA6Q15084 440 aa10.99□□□□□ -0.65
CSTF1-202ENST00000415828 STAC3Q96MF2 364 aa10.99□□□□□ -0.65
CSTF1-202ENST00000415828 VSIG10Q8N0Z9 540 aa10.98□□□□□ -0.65
CSTF1-202ENST00000415828 ZBED2Q9BTP6 218 aa10.98□□□□□ -0.65
CSTF1-202ENST00000415828 EPAS1Q99814 870 aa10.97□□□□□ -0.65
CSTF1-202ENST00000415828 SLC4A5Q9BY07 1137 aa10.97□□□□□ -0.65
CSTF1-202ENST00000415828 KDM2AQ9Y2K7 1162 aa10.97□□□□□ -0.65
CSTF1-202ENST00000415828 SPDYE16A6NNV3 312 aaPredicted RBP10.96□□□□□ -0.65
CSTF1-202ENST00000415828 COL9A1P20849 921 aa10.96□□□□□ -0.65
CSTF1-202ENST00000415828 CYB5RLQ6IPT4 315 aa10.96□□□□□ -0.65
CSTF1-202ENST00000415828 RBM33Q96EV2 1170 aaKnown RBP10.96□□□□□ -0.65
CSTF1-202ENST00000415828 PPP1R3GB7ZBB8 358 aa10.95□□□□□ -0.66
CSTF1-202ENST00000415828 ARIH1Q9Y4X5 557 aaPredicted RBP10.95□□□□□ -0.66
CSTF1-202ENST00000415828 NBR1Q14596 966 aa10.94□□□□□ -0.66
CSTF1-202ENST00000415828 C6orf132Q5T0Z8 1188 aa10.92□□□□□ -0.66
CSTF1-202ENST00000415828 BHMG1C9JSJ3 638 aaPredicted RBP10.91□□□□□ -0.66
CSTF1-202ENST00000415828 PROX2Q3B8N5 592 aa10.91□□□□□ -0.66
CSTF1-202ENST00000415828 KCTD12Q96CX2 325 aaKnown RBP10.91□□□□□ -0.66
CSTF1-202ENST00000415828 NCAPD3P42695 1498 aa10.9□□□□□ -0.66
CSTF1-202ENST00000415828 GRXCR2A6NFK2 248 aa10.9□□□□□ -0.66
CSTF1-202ENST00000415828 EN1Q05925 392 aaPredicted RBP10.89□□□□□ -0.67
CSTF1-202ENST00000415828 MRPL50Q8N5N7 158 aaKnown RBP10.88□□□□□ -0.67
CSTF1-202ENST00000415828 HCSTQ9UBK5 93 aa10.88□□□□□ -0.67
CSTF1-202ENST00000415828 LAMC3Q9Y6N6 1575 aa10.87□□□□□ -0.67
CSTF1-202ENST00000415828 MAP3K7O43318 606 aa10.87□□□□□ -0.67
CSTF1-202ENST00000415828 TSR1Q2NL82 804 aaKnown RBP10.87□□□□□ -0.67
CSTF1-202ENST00000415828 ARAP1Q96P48 1450 aa10.87□□□□□ -0.67
CSTF1-202ENST00000415828 KCNV2Q8TDN2 545 aa10.86□□□□□ -0.67
CSTF1-202ENST00000415828 NBPF3Q9H094 633 aa10.86□□□□□ -0.67
CSTF1-202ENST00000415828 WDR62O43379 1518 aa10.85□□□□□ -0.67
CSTF1-202ENST00000415828 GOLGA8CPA6NN73 597 aa10.85□□□□□ -0.67
CSTF1-202ENST00000415828 PRIM1P49642 420 aaKnown RBP10.85□□□□□ -0.67
CSTF1-202ENST00000415828 RABGEF1Q9UJ41 708 aa10.85□□□□□ -0.67
CSTF1-202ENST00000415828 ARHGEF1Q92888 912 aaKnown RBP10.83□□□□□ -0.68
CSTF1-202ENST00000415828 KIAA1468Q9P260 1216 aa10.83□□□□□ -0.68
CSTF1-202ENST00000415828 PTPN5P54829 565 aa10.82□□□□□ -0.68
CSTF1-202ENST00000415828 P3H3Q8IVL6 736 aa10.82□□□□□ -0.68
CSTF1-202ENST00000415828 WNT2BQ93097 391 aa10.82□□□□□ -0.68
CSTF1-202ENST00000415828 OSBPP22059 807 aa10.81□□□□□ -0.68
CSTF1-202ENST00000415828 TRIM6-TRIM34B2RNG4 842 aa10.8□□□□□ -0.68
CSTF1-202ENST00000415828 MRC2Q9UBG0 1479 aa10.8□□□□□ -0.68
CSTF1-202ENST00000415828 THSD4Q6ZMP0 1018 aa10.79□□□□□ -0.68
CSTF1-202ENST00000415828 ONECUT3O60422 494 aaPredicted RBP10.78□□□□□ -0.68
CSTF1-202ENST00000415828 SEPT9Q9UHD8 586 aaPredicted RBP10.78□□□□□ -0.68
CSTF1-202ENST00000415828 CDHR5Q9HBB8 845 aa10.77□□□□□ -0.69
CSTF1-202ENST00000415828 TSKSQ9UJT2 592 aa10.77□□□□□ -0.69
CSTF1-202ENST00000415828 ATAD2BQ9ULI0 1458 aa10.76□□□□□ -0.69
CSTF1-202ENST00000415828 HMGXB3Q12766 1538 aa10.76□□□□□ -0.69
CSTF1-202ENST00000415828 MLLT3P42568 568 aaPredicted RBP10.76□□□□□ -0.69
CSTF1-202ENST00000415828 LAPTM4BQ86VI4 370 aa10.75□□□□□ -0.69
CSTF1-202ENST00000415828 PLA2G2EQ9NZK7 142 aa10.75□□□□□ -0.69
CSTF1-202ENST00000415828 PDS5BQ9NTI5 1447 aa10.75□□□□□ -0.69
CSTF1-202ENST00000415828 DCAF1Q9Y4B6 1507 aa10.74□□□□□ -0.69
CSTF1-202ENST00000415828 ANKK1Q8NFD2 765 aa10.74□□□□□ -0.69
CSTF1-202ENST00000415828 CDCA7LQ96GN5 454 aa10.74□□□□□ -0.69
CSTF1-202ENST00000415828 PRSS12P56730 875 aa10.73□□□□□ -0.69
CSTF1-202ENST00000415828 PACS2Q86VP3 889 aa10.73□□□□□ -0.69
CSTF1-202ENST00000415828 CERKQ8TCT0 537 aa10.73□□□□□ -0.69
CSTF1-202ENST00000415828 ZFRQ96KR1 1074 aaKnown RBP10.73□□□□□ -0.69
CSTF1-202ENST00000415828 BCAMP50895 628 aa10.72□□□□□ -0.69
CSTF1-202ENST00000415828 FAM98CQ17RN3 349 aaKnown RBP10.71□□□□□ -0.69
CSTF1-202ENST00000415828 FAM198AQ9UFP1 575 aa10.71□□□□□ -0.69
CSTF1-202ENST00000415828 CHD1O14646 1710 aa10.7□□□□□ -0.7
CSTF1-202ENST00000415828 LMTK3Q96Q04 1460 aa10.7□□□□□ -0.7
CSTF1-202ENST00000415828 ZCCHC6Q5VYS8 1495 aaKnown RBP10.69□□□□□ -0.7
CSTF1-202ENST00000415828 SMAPO00193 183 aa10.69□□□□□ -0.7
CSTF1-202ENST00000415828 SOWAHBA6NEL2 793 aa10.68□□□□□ -0.7
CSTF1-202ENST00000415828 NPDC1Q9NQX5 325 aaPredicted RBP10.68□□□□□ -0.7
CSTF1-202ENST00000415828 C3orf80F5H4A9 247 aa10.67□□□□□ -0.7
CSTF1-202ENST00000415828 SEMA3EO15041 775 aa10.67□□□□□ -0.7
CSTF1-202ENST00000415828 ILDR2Q71H61 639 aa10.66□□□□□ -0.7
CSTF1-202ENST00000415828 PNMA3Q9UL41 463 aa10.66□□□□□ -0.7
CSTF1-202ENST00000415828 TATDN2Q93075 761 aa10.65□□□□□ -0.7
CSTF1-202ENST00000415828 NBPF26B4DH59 902 aa10.64□□□□□ -0.71
CSTF1-202ENST00000415828 SOCS7O14512 581 aa10.64□□□□□ -0.71
CSTF1-202ENST00000415828 PADI6Q6TGC4 694 aa10.64□□□□□ -0.71
CSTF1-202ENST00000415828 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.64□□□□□ -0.71
CSTF1-202ENST00000415828 RBM27Q9P2N5 1060 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms