RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 Q6ZNB5 142 aa10.01□□□□□ -0.81
TRAPPC13-203ENST00000415825 PCDHGA10Q9Y5H3 936 aa10.01□□□□□ -0.81
TRAPPC13-203ENST00000415825 SOWAHBA6NEL2 793 aa10□□□□□ -0.81
TRAPPC13-203ENST00000415825 ITGBL1O95965 494 aaPredicted RBP10□□□□□ -0.81
TRAPPC13-203ENST00000415825 BCAMP50895 628 aa10□□□□□ -0.81
TRAPPC13-203ENST00000415825 KCNC4Q03721 635 aa10□□□□□ -0.81
TRAPPC13-203ENST00000415825 EPAS1Q99814 870 aa10□□□□□ -0.81
TRAPPC13-203ENST00000415825 MFSD10Q14728 455 aa9.99□□□□□ -0.81
TRAPPC13-203ENST00000415825 KIAA1468Q9P260 1216 aa9.99□□□□□ -0.81
TRAPPC13-203ENST00000415825 GTPBP6O43824 516 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC13-203ENST00000415825 ONECUT3O60422 494 aaPredicted RBP9.98□□□□□ -0.81
TRAPPC13-203ENST00000415825 ZFRQ96KR1 1074 aaKnown RBP9.98□□□□□ -0.81
TRAPPC13-203ENST00000415825 COL9A1P20849 921 aa9.96□□□□□ -0.82
TRAPPC13-203ENST00000415825 LAPTM4AQ15012 233 aa9.96□□□□□ -0.82
TRAPPC13-203ENST00000415825 LRCH3Q96II8 777 aa9.96□□□□□ -0.82
TRAPPC13-203ENST00000415825 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC13-203ENST00000415825 FAM98CQ17RN3 349 aaKnown RBP9.94□□□□□ -0.82
TRAPPC13-203ENST00000415825 EMILIN3Q9NT22 766 aa9.94□□□□□ -0.82
TRAPPC13-203ENST00000415825 C6orf132Q5T0Z8 1188 aa9.93□□□□□ -0.82
TRAPPC13-203ENST00000415825 WBP1LQ9NX94 342 aa9.93□□□□□ -0.82
TRAPPC13-203ENST00000415825 SEPT9Q9UHD8 586 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC13-203ENST00000415825 TSR3Q9UJK0 312 aaKnown RBP9.93□□□□□ -0.82
TRAPPC13-203ENST00000415825 PACS2Q86VP3 889 aa9.92□□□□□ -0.82
TRAPPC13-203ENST00000415825 TRIM6-TRIM34B2RNG4 842 aa9.91□□□□□ -0.82
TRAPPC13-203ENST00000415825 RBM33Q96EV2 1170 aaKnown RBP9.91□□□□□ -0.82
TRAPPC13-203ENST00000415825 HPS5Q9UPZ3 1129 aa9.91□□□□□ -0.82
TRAPPC13-203ENST00000415825 PPP4CP60510 307 aa9.89□□□□□ -0.83
TRAPPC13-203ENST00000415825 DPYSL4O14531 572 aa9.87□□□□□ -0.83
TRAPPC13-203ENST00000415825 MAP3K7O43318 606 aa9.86□□□□□ -0.83
TRAPPC13-203ENST00000415825 HDGFP51858 240 aaKnown RBP9.85□□□□□ -0.83
TRAPPC13-203ENST00000415825 DDX12PQ92771 950 aa9.85□□□□□ -0.83
TRAPPC13-203ENST00000415825 NBR1Q14596 966 aa9.83□□□□□ -0.84
TRAPPC13-203ENST00000415825 GFRA3O60609 400 aa9.82□□□□□ -0.84
TRAPPC13-203ENST00000415825 CAMK2BQ13554 666 aa9.8□□□□□ -0.84
TRAPPC13-203ENST00000415825 CERKQ8TCT0 537 aa9.79□□□□□ -0.84
TRAPPC13-203ENST00000415825 NBPF26B4DH59 902 aa9.78□□□□□ -0.84
TRAPPC13-203ENST00000415825 SLC4A3P48751 1232 aa9.78□□□□□ -0.84
TRAPPC13-203ENST00000415825 EN1Q05925 392 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC13-203ENST00000415825 TRAF7Q6Q0C0 670 aa9.78□□□□□ -0.84
TRAPPC13-203ENST00000415825 CADPS2Q86UW7 1296 aa9.78□□□□□ -0.84
TRAPPC13-203ENST00000415825 NECTIN2Q92692 538 aa9.78□□□□□ -0.84
TRAPPC13-203ENST00000415825 SPDYE16A6NNV3 312 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC13-203ENST00000415825 RNF40O75150 1001 aa9.77□□□□□ -0.85
TRAPPC13-203ENST00000415825 GGCXP38435 758 aa9.76□□□□□ -0.85
TRAPPC13-203ENST00000415825 PRKD2Q9BZL6 878 aa9.76□□□□□ -0.85
TRAPPC13-203ENST00000415825 IL21Q9HBE4 155 aa9.76□□□□□ -0.85
TRAPPC13-203ENST00000415825 SAMD7Q7Z3H4 446 aa9.75□□□□□ -0.85
TRAPPC13-203ENST00000415825 CDCA7LQ96GN5 454 aa9.74□□□□□ -0.85
TRAPPC13-203ENST00000415825 NRG2O14511 850 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC13-203ENST00000415825 TSR1Q2NL82 804 aaKnown RBP9.73□□□□□ -0.85
TRAPPC13-203ENST00000415825 TSKSQ9UJT2 592 aa9.73□□□□□ -0.85
TRAPPC13-203ENST00000415825 PRSS12P56730 875 aa9.72□□□□□ -0.85
TRAPPC13-203ENST00000415825 V9GY48 417 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC13-203ENST00000415825 PDIA6Q15084 440 aa9.71□□□□□ -0.86
TRAPPC13-203ENST00000415825 MTRQ99707 1265 aa9.71□□□□□ -0.86
TRAPPC13-203ENST00000415825 WDR70Q9NW82 654 aa9.71□□□□□ -0.86
TRAPPC13-203ENST00000415825 PNMA3Q9UL41 463 aa9.71□□□□□ -0.86
TRAPPC13-203ENST00000415825 SMAPO00193 183 aa9.7□□□□□ -0.86
TRAPPC13-203ENST00000415825 TJAP1Q5JTD0 557 aa9.69□□□□□ -0.86
TRAPPC13-203ENST00000415825 TATDN2Q93075 761 aa9.69□□□□□ -0.86
TRAPPC13-203ENST00000415825 GRXCR2A6NFK2 248 aa9.68□□□□□ -0.86
TRAPPC13-203ENST00000415825 PPP1R18Q6NYC8 613 aa9.68□□□□□ -0.86
TRAPPC13-203ENST00000415825 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.68□□□□□ -0.86
TRAPPC13-203ENST00000415825 PDZRN3Q9UPQ7 1066 aa9.66□□□□□ -0.86
TRAPPC13-203ENST00000415825 E2F4Q16254 413 aa9.65□□□□□ -0.86
TRAPPC13-203ENST00000415825 SLF2Q8IX21 1173 aa9.65□□□□□ -0.86
TRAPPC13-203ENST00000415825 BBXQ8WY36 941 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC13-203ENST00000415825 PRR14Q9BWN1 585 aa9.64□□□□□ -0.87
TRAPPC13-203ENST00000415825 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC13-203ENST00000415825 ZNF787Q6DD87 383 aa9.63□□□□□ -0.87
TRAPPC13-203ENST00000415825 NUDT18Q6ZVK8 323 aa9.63□□□□□ -0.87
TRAPPC13-203ENST00000415825 RBM27Q9P2N5 1060 aaKnown RBP9.63□□□□□ -0.87
TRAPPC13-203ENST00000415825 SPRYD3Q8NCJ5 442 aa9.61□□□□□ -0.87
TRAPPC13-203ENST00000415825 TMUB1Q9BVT8 246 aa9.6□□□□□ -0.87
TRAPPC13-203ENST00000415825 COPS2P61201 443 aa9.59□□□□□ -0.87
TRAPPC13-203ENST00000415825 ZNF516Q92618 1163 aa9.59□□□□□ -0.87
TRAPPC13-203ENST00000415825 APLP1P51693 650 aa9.57□□□□□ -0.88
TRAPPC13-203ENST00000415825 FAM198AQ9UFP1 575 aa9.56□□□□□ -0.88
TRAPPC13-203ENST00000415825 SWT1Q5T5J6 900 aaKnown RBP9.55□□□□□ -0.88
TRAPPC13-203ENST00000415825 PKDCCQ504Y2 493 aa9.54□□□□□ -0.88
TRAPPC13-203ENST00000415825 PCDHB3Q9Y5E6 796 aa9.54□□□□□ -0.88
TRAPPC13-203ENST00000415825 ARIH1Q9Y4X5 557 aaPredicted RBP9.53□□□□□ -0.88
TRAPPC13-203ENST00000415825 ZPR1O75312 459 aa9.52□□□□□ -0.89
TRAPPC13-203ENST00000415825 NKX2-3Q8TAU0 364 aa9.52□□□□□ -0.89
TRAPPC13-203ENST00000415825 CDHR5Q9HBB8 845 aa9.52□□□□□ -0.89
TRAPPC13-203ENST00000415825 PADI6Q6TGC4 694 aa9.51□□□□□ -0.89
TRAPPC13-203ENST00000415825 LCE2BO14633 110 aa9.5□□□□□ -0.89
TRAPPC13-203ENST00000415825 OSBPP22059 807 aa9.5□□□□□ -0.89
TRAPPC13-203ENST00000415825 SLC19A1P41440 591 aa9.5□□□□□ -0.89
TRAPPC13-203ENST00000415825 KMT5BQ4FZB7 885 aa9.49□□□□□ -0.89
TRAPPC13-203ENST00000415825 C3orf80F5H4A9 247 aa9.48□□□□□ -0.89
TRAPPC13-203ENST00000415825 CFAP44Q96MT7 982 aa9.47□□□□□ -0.89
TRAPPC13-203ENST00000415825 PRIM1P49642 420 aaKnown RBP9.46□□□□□ -0.9
TRAPPC13-203ENST00000415825 DGAT1O75907 488 aa9.45□□□□□ -0.9
TRAPPC13-203ENST00000415825 DNAJB2P25686 324 aa9.45□□□□□ -0.9
TRAPPC13-203ENST00000415825 RBM46Q8TBY0 533 aaKnown RBP9.45□□□□□ -0.9
TRAPPC13-203ENST00000415825 RNF223E7ERA6 249 aa9.43□□□□□ -0.9
TRAPPC13-203ENST00000415825 PAXIP1Q6ZW49 1069 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC13-203ENST00000415825 TTC13Q8NBP0 860 aa9.43□□□□□ -0.9
TRAPPC13-203ENST00000415825 ZNF775Q96BV0 537 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms