RNA–Protein interactions for RNA: ENST00000415579.2

PTCD2P2-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 2, humanhuman

BASIC

Gene PTCD2P2, Length 1,095 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P2-201ENST00000415579 PLA2G2EQ9NZK7 142 aa13.09□□□□□ -0.31
PTCD2P2-201ENST00000415579 TYW1BQ6NUM6 668 aa13.08□□□□□ -0.32
PTCD2P2-201ENST00000415579 RBM33Q96EV2 1170 aaKnown RBP13.07□□□□□ -0.32
PTCD2P2-201ENST00000415579 MRPL50Q8N5N7 158 aaKnown RBP13.05□□□□□ -0.32
PTCD2P2-201ENST00000415579 PPP1R3GB7ZBB8 358 aa13.04□□□□□ -0.32
PTCD2P2-201ENST00000415579 GOLGA8CPA6NN73 597 aa13.03□□□□□ -0.32
PTCD2P2-201ENST00000415579 FBXW7Q969H0 707 aa13.03□□□□□ -0.32
PTCD2P2-201ENST00000415579 C6orf132Q5T0Z8 1188 aa13.02□□□□□ -0.33
PTCD2P2-201ENST00000415579 WNT2BQ93097 391 aa13.02□□□□□ -0.33
PTCD2P2-201ENST00000415579 THSD4Q6ZMP0 1018 aa13□□□□□ -0.33
PTCD2P2-201ENST00000415579 E2F4Q16254 413 aa12.99□□□□□ -0.33
PTCD2P2-201ENST00000415579 EPAS1Q99814 870 aa12.99□□□□□ -0.33
PTCD2P2-201ENST00000415579 NBPF3Q9H094 633 aa12.98□□□□□ -0.33
PTCD2P2-201ENST00000415579 KIAA1468Q9P260 1216 aa12.98□□□□□ -0.33
PTCD2P2-201ENST00000415579 NBR1Q14596 966 aa12.97□□□□□ -0.33
PTCD2P2-201ENST00000415579 WDR70Q9NW82 654 aa12.97□□□□□ -0.33
PTCD2P2-201ENST00000415579 RABGEF1Q9UJ41 708 aa12.97□□□□□ -0.33
PTCD2P2-201ENST00000415579 PDIA6Q15084 440 aa12.96□□□□□ -0.33
PTCD2P2-201ENST00000415579 TSR1Q2NL82 804 aaKnown RBP12.96□□□□□ -0.33
PTCD2P2-201ENST00000415579 SEPT9Q9UHD8 586 aaPredicted RBP12.94□□□□□ -0.34
PTCD2P2-201ENST00000415579 PRIM1P49642 420 aaKnown RBP12.93□□□□□ -0.34
PTCD2P2-201ENST00000415579 GRXCR2A6NFK2 248 aa12.92□□□□□ -0.34
PTCD2P2-201ENST00000415579 MAP3K7O43318 606 aa12.92□□□□□ -0.34
PTCD2P2-201ENST00000415579 BCAMP50895 628 aa12.9□□□□□ -0.34
PTCD2P2-201ENST00000415579 EN1Q05925 392 aaPredicted RBP12.9□□□□□ -0.34
PTCD2P2-201ENST00000415579 TSHZ2Q9NRE2 1034 aa12.9□□□□□ -0.34
PTCD2P2-201ENST00000415579 SPDYE16A6NNV3 312 aaPredicted RBP12.89□□□□□ -0.35
PTCD2P2-201ENST00000415579 TRIM6-TRIM34B2RNG4 842 aa12.88□□□□□ -0.35
PTCD2P2-201ENST00000415579 ANKK1Q8NFD2 765 aa12.86□□□□□ -0.35
PTCD2P2-201ENST00000415579 ZFRQ96KR1 1074 aaKnown RBP12.86□□□□□ -0.35
PTCD2P2-201ENST00000415579 TSKSQ9UJT2 592 aa12.86□□□□□ -0.35
PTCD2P2-201ENST00000415579 ARIH1Q9Y4X5 557 aaPredicted RBP12.83□□□□□ -0.36
PTCD2P2-201ENST00000415579 ONECUT3O60422 494 aaPredicted RBP12.82□□□□□ -0.36
PTCD2P2-201ENST00000415579 LAPTM4BQ86VI4 370 aa12.82□□□□□ -0.36
PTCD2P2-201ENST00000415579 SOWAHBA6NEL2 793 aa12.81□□□□□ -0.36
PTCD2P2-201ENST00000415579 SMAPO00193 183 aa12.81□□□□□ -0.36
PTCD2P2-201ENST00000415579 CDHR5Q9HBB8 845 aa12.81□□□□□ -0.36
PTCD2P2-201ENST00000415579 FAM198AQ9UFP1 575 aa12.81□□□□□ -0.36
PTCD2P2-201ENST00000415579 C3orf80F5H4A9 247 aa12.8□□□□□ -0.36
PTCD2P2-201ENST00000415579 OSBPP22059 807 aa12.8□□□□□ -0.36
PTCD2P2-201ENST00000415579 CDCA7LQ96GN5 454 aa12.79□□□□□ -0.36
PTCD2P2-201ENST00000415579 WBP1LQ9NX94 342 aa12.79□□□□□ -0.36
PTCD2P2-201ENST00000415579 FAM98CQ17RN3 349 aaKnown RBP12.77□□□□□ -0.37
PTCD2P2-201ENST00000415579 PACS2Q86VP3 889 aa12.77□□□□□ -0.37
PTCD2P2-201ENST00000415579 PRSS12P56730 875 aa12.76□□□□□ -0.37
PTCD2P2-201ENST00000415579 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.73□□□□□ -0.37
PTCD2P2-201ENST00000415579 HPS5Q9UPZ3 1129 aa12.72□□□□□ -0.37
PTCD2P2-201ENST00000415579 MLLT3P42568 568 aaPredicted RBP12.71□□□□□ -0.37
PTCD2P2-201ENST00000415579 KCNV2Q8TDN2 545 aa12.71□□□□□ -0.37
PTCD2P2-201ENST00000415579 LRCH3Q96II8 777 aa12.71□□□□□ -0.37
PTCD2P2-201ENST00000415579 PNMA3Q9UL41 463 aa12.7□□□□□ -0.38
PTCD2P2-201ENST00000415579 TATDN2Q93075 761 aa12.69□□□□□ -0.38
PTCD2P2-201ENST00000415579 IFFO2Q5TF58 517 aa12.68□□□□□ -0.38
PTCD2P2-201ENST00000415579 SAMD7Q7Z3H4 446 aa12.68□□□□□ -0.38
PTCD2P2-201ENST00000415579 TSR3Q9UJK0 312 aaKnown RBP12.68□□□□□ -0.38
PTCD2P2-201ENST00000415579 A0A0G2JS52 829 aa12.67□□□□□ -0.38
PTCD2P2-201ENST00000415579 NUDT18Q6ZVK8 323 aa12.67□□□□□ -0.38
PTCD2P2-201ENST00000415579 CERKQ8TCT0 537 aa12.67□□□□□ -0.38
PTCD2P2-201ENST00000415579 NPDC1Q9NQX5 325 aaPredicted RBP12.67□□□□□ -0.38
PTCD2P2-201ENST00000415579 ARHGEF1Q92888 912 aaKnown RBP12.64□□□□□ -0.39
PTCD2P2-201ENST00000415579 ITGBL1O95965 494 aaPredicted RBP12.63□□□□□ -0.39
PTCD2P2-201ENST00000415579 PPP4CP60510 307 aa12.63□□□□□ -0.39
PTCD2P2-201ENST00000415579 PADI6Q6TGC4 694 aa12.63□□□□□ -0.39
PTCD2P2-201ENST00000415579 NBPF26B4DH59 902 aa12.62□□□□□ -0.39
PTCD2P2-201ENST00000415579 NYAP1Q6ZVC0 841 aa12.6□□□□□ -0.39
PTCD2P2-201ENST00000415579 RNF40O75150 1001 aa12.59□□□□□ -0.39
PTCD2P2-201ENST00000415579 KCNC4Q03721 635 aa12.58□□□□□ -0.4
PTCD2P2-201ENST00000415579 TTC13Q8NBP0 860 aa12.57□□□□□ -0.4
PTCD2P2-201ENST00000415579 SEMA3EO15041 775 aa12.54□□□□□ -0.4
PTCD2P2-201ENST00000415579 RBM27Q9P2N5 1060 aaKnown RBP12.54□□□□□ -0.4
PTCD2P2-201ENST00000415579 SWT1Q5T5J6 900 aaKnown RBP12.53□□□□□ -0.4
PTCD2P2-201ENST00000415579 HDGFP51858 240 aaKnown RBP12.51□□□□□ -0.41
PTCD2P2-201ENST00000415579 FAM161AQ3B820 660 aa12.51□□□□□ -0.41
PTCD2P2-201ENST00000415579 TJAP1Q5JTD0 557 aa12.51□□□□□ -0.41
PTCD2P2-201ENST00000415579 NUTM2FA1L443 756 aa12.5□□□□□ -0.41
PTCD2P2-201ENST00000415579 RGS20O76081 388 aa12.5□□□□□ -0.41
PTCD2P2-201ENST00000415579 APLP1P51693 650 aa12.5□□□□□ -0.41
PTCD2P2-201ENST00000415579 PLCB2Q00722 1185 aa12.5□□□□□ -0.41
PTCD2P2-201ENST00000415579 PTGDRQ13258 359 aa12.5□□□□□ -0.41
PTCD2P2-201ENST00000415579 EYA1Q99502 592 aa12.5□□□□□ -0.41
PTCD2P2-201ENST00000415579 ZNF516Q92618 1163 aa12.48□□□□□ -0.41
PTCD2P2-201ENST00000415579 MTRQ99707 1265 aa12.48□□□□□ -0.41
PTCD2P2-201ENST00000415579 IRX2Q9BZI1 471 aaPredicted RBP12.47□□□□□ -0.41
PTCD2P2-201ENST00000415579 P3H3Q8IVL6 736 aa12.44□□□□□ -0.42
PTCD2P2-201ENST00000415579 COPS2P61201 443 aa12.42□□□□□ -0.42
PTCD2P2-201ENST00000415579 NKX2-3Q8TAU0 364 aa12.42□□□□□ -0.42
PTCD2P2-201ENST00000415579 IL21Q9HBE4 155 aa12.41□□□□□ -0.42
PTCD2P2-201ENST00000415579 RBM26Q5T8P6 1007 aaKnown RBP12.4□□□□□ -0.42
PTCD2P2-201ENST00000415579 SLF2Q8IX21 1173 aa12.4□□□□□ -0.42
PTCD2P2-201ENST00000415579 ADGRG1Q9Y653 693 aa12.4□□□□□ -0.42
PTCD2P2-201ENST00000415579 HAP1P54257 671 aaPredicted RBP12.38□□□□□ -0.43
PTCD2P2-201ENST00000415579 PPP1R18Q6NYC8 613 aa12.38□□□□□ -0.43
PTCD2P2-201ENST00000415579 RCCD1A6NED2 376 aa12.36□□□□□ -0.43
PTCD2P2-201ENST00000415579 RBM46Q8TBY0 533 aaKnown RBP12.36□□□□□ -0.43
PTCD2P2-201ENST00000415579 FCHSD2O94868 740 aa12.35□□□□□ -0.43
PTCD2P2-201ENST00000415579 DNAJB2P25686 324 aa12.35□□□□□ -0.43
PTCD2P2-201ENST00000415579 TESPA1A2RU30 521 aaPredicted RBP12.34□□□□□ -0.43
PTCD2P2-201ENST00000415579 TMEM134Q9H6X4 195 aa12.33□□□□□ -0.44
PTCD2P2-201ENST00000415579 KDM2AQ9Y2K7 1162 aa12.33□□□□□ -0.44
PTCD2P2-201ENST00000415579 FECHP22830 423 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms