RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 TRIM52Q96A61 297 aa12.07□□□□□ -0.48
HDAC9-207ENST00000413509 MROH1Q8NDA8 1641 aa12.07□□□□□ -0.48
HDAC9-207ENST00000413509 RNF17Q9BXT8 1623 aaKnown RBP12.07□□□□□ -0.48
HDAC9-207ENST00000413509 DHX29Q7Z478 1369 aaKnown RBP12.06□□□□□ -0.48
HDAC9-207ENST00000413509 TSPOAP1O95153 1857 aa12.06□□□□□ -0.48
HDAC9-207ENST00000413509 PRDM15P57071 1507 aaPredicted RBP12.06□□□□□ -0.48
HDAC9-207ENST00000413509 NUP155O75694 1391 aa12.05□□□□□ -0.48
HDAC9-207ENST00000413509 DIP2CQ9Y2E4 1556 aa12.05□□□□□ -0.48
HDAC9-207ENST00000413509 PHF23Q9BUL5 403 aaPredicted RBP12.05□□□□□ -0.48
HDAC9-207ENST00000413509 A2MP01023 1474 aa12.04□□□□□ -0.48
HDAC9-207ENST00000413509 TRHP20396 242 aaPredicted RBP12.04□□□□□ -0.48
HDAC9-207ENST00000413509 SLC4A1APQ9BWU0 796 aaKnown RBP12.04□□□□□ -0.48
HDAC9-207ENST00000413509 RPRD2Q5VT52 1461 aaKnown RBP12.03□□□□□ -0.48
HDAC9-207ENST00000413509 SIN3AQ96ST3 1273 aa12.03□□□□□ -0.48
HDAC9-207ENST00000413509 REREQ9P2R6 1566 aa12.02□□□□□ -0.49
HDAC9-207ENST00000413509 ATP10AO60312 1499 aa12.02□□□□□ -0.49
HDAC9-207ENST00000413509 LMTK2Q8IWU2 1503 aa12.01□□□□□ -0.49
HDAC9-207ENST00000413509 TET3O43151 1660 aa12□□□□□ -0.49
HDAC9-207ENST00000413509 PKD2Q13563 968 aa12□□□□□ -0.49
HDAC9-207ENST00000413509 RAPGEF3O95398 923 aa11.99□□□□□ -0.49
HDAC9-207ENST00000413509 PLA2R1Q13018 1463 aa11.99□□□□□ -0.49
HDAC9-207ENST00000413509 COL17A1Q9UMD9 1497 aaPredicted RBP11.98□□□□□ -0.49
HDAC9-207ENST00000413509 YEATS2Q9ULM3 1422 aa11.98□□□□□ -0.49
HDAC9-207ENST00000413509 FOXD1Q16676 465 aa11.98□□□□□ -0.49
HDAC9-207ENST00000413509 E9PCH4 1651 aa11.97□□□□□ -0.49
HDAC9-207ENST00000413509 AGLP35573 1532 aa11.96□□□□□ -0.49
HDAC9-207ENST00000413509 ARHGEF40Q8TER5 1519 aa11.96□□□□□ -0.49
HDAC9-207ENST00000413509 TONSLQ96HA7 1378 aa11.96□□□□□ -0.49
HDAC9-207ENST00000413509 NEUROD1Q13562 356 aa11.96□□□□□ -0.49
HDAC9-207ENST00000413509 EFCAB6Q5THR3 1501 aa11.96□□□□□ -0.5
HDAC9-207ENST00000413509 PTPRTO14522 1441 aa11.95□□□□□ -0.5
HDAC9-207ENST00000413509 PPP1R15AO75807 674 aaPredicted RBP11.95□□□□□ -0.5
HDAC9-207ENST00000413509 KANK1Q14678 1352 aa11.94□□□□□ -0.5
HDAC9-207ENST00000413509 TRPM2O94759 1503 aa11.94□□□□□ -0.5
HDAC9-207ENST00000413509 ZC3H13Q5T200 1668 aaKnown RBP11.94□□□□□ -0.5
HDAC9-207ENST00000413509 ABCC3O15438 1527 aa11.93□□□□□ -0.5
HDAC9-207ENST00000413509 KIF3BO15066 747 aa11.93□□□□□ -0.5
HDAC9-207ENST00000413509 SPHKAPQ2M3C7 1700 aa11.93□□□□□ -0.5
HDAC9-207ENST00000413509 CEP152O94986 1710 aa11.92□□□□□ -0.5
HDAC9-207ENST00000413509 NEURL4Q96JN8 1562 aa11.92□□□□□ -0.5
HDAC9-207ENST00000413509 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.91□□□□□ -0.5
HDAC9-207ENST00000413509 SIGLEC1Q9BZZ2 1709 aa11.91□□□□□ -0.5
HDAC9-207ENST00000413509 MYT1LQ9UL68 1186 aa11.9□□□□□ -0.5
HDAC9-207ENST00000413509 CAMSAP1Q5T5Y3 1602 aa11.89□□□□□ -0.51
HDAC9-207ENST00000413509 ARHGAP31Q2M1Z3 1444 aa11.89□□□□□ -0.51
HDAC9-207ENST00000413509 UHRF1BP1Q6BDS2 1440 aa11.89□□□□□ -0.51
HDAC9-207ENST00000413509 L3MBTL2Q969R5 705 aa11.89□□□□□ -0.51
HDAC9-207ENST00000413509 CCDC144AA2RUR9 1427 aa11.88□□□□□ -0.51
HDAC9-207ENST00000413509 CLTCL1P53675 1640 aa11.88□□□□□ -0.51
HDAC9-207ENST00000413509 SPATA31E1Q6ZUB1 1445 aa11.87□□□□□ -0.51
HDAC9-207ENST00000413509 ZNF316A6NFI3 1004 aaPredicted RBP11.87□□□□□ -0.51
HDAC9-207ENST00000413509 NPATQ14207 1427 aa11.86□□□□□ -0.51
HDAC9-207ENST00000413509 PPP6R1Q9UPN7 881 aa11.85□□□□□ -0.51
HDAC9-207ENST00000413509 NOS1P29475 1434 aa11.85□□□□□ -0.51
HDAC9-207ENST00000413509 PIK3C2BO00750 1634 aa11.84□□□□□ -0.51
HDAC9-207ENST00000413509 CNTLNQ9NXG0 1405 aa11.84□□□□□ -0.51
HDAC9-207ENST00000413509 SYNMO15061 1565 aa11.82□□□□□ -0.52
HDAC9-207ENST00000413509 RALGAPBQ86X10 1494 aa11.82□□□□□ -0.52
HDAC9-207ENST00000413509 ADGRB3O60242 1522 aa11.81□□□□□ -0.52
HDAC9-207ENST00000413509 NBPF8Q3BBV2 869 aa11.81□□□□□ -0.52
HDAC9-207ENST00000413509 GGT6Q6P531 493 aa11.81□□□□□ -0.52
HDAC9-207ENST00000413509 WASHC2CQ9Y4E1 1318 aa11.81□□□□□ -0.52
HDAC9-207ENST00000413509 KIF1BO60333 1816 aa11.8□□□□□ -0.52
HDAC9-207ENST00000413509 PREX1Q8TCU6 1659 aa11.8□□□□□ -0.52
HDAC9-207ENST00000413509 IFT172Q9UG01 1749 aa11.8□□□□□ -0.52
HDAC9-207ENST00000413509 UGGT1Q9NYU2 1555 aa11.79□□□□□ -0.52
HDAC9-207ENST00000413509 PRAG1Q86YV5 1406 aa11.79□□□□□ -0.52
HDAC9-207ENST00000413509 TRPM1Q7Z4N2 1603 aa11.78□□□□□ -0.52
HDAC9-207ENST00000413509 MROH2AA6NES4 1674 aa11.78□□□□□ -0.52
HDAC9-207ENST00000413509 CLTCQ00610 1675 aaKnown RBP11.78□□□□□ -0.52
HDAC9-207ENST00000413509 LAMC1P11047 1609 aa11.78□□□□□ -0.52
HDAC9-207ENST00000413509 STAC3Q96MF2 364 aa11.77□□□□□ -0.53
HDAC9-207ENST00000413509 MADDQ8WXG6 1647 aa11.77□□□□□ -0.53
HDAC9-207ENST00000413509 MYOM2P54296 1465 aa11.76□□□□□ -0.53
HDAC9-207ENST00000413509 ERVK-7P63135 1459 aa11.76□□□□□ -0.53
HDAC9-207ENST00000413509 SPATA31D1Q6ZQQ2 1576 aa11.76□□□□□ -0.53
HDAC9-207ENST00000413509 GPRASP1Q5JY77 1395 aa11.76□□□□□ -0.53
HDAC9-207ENST00000413509 NRXN1Q9ULB1 1477 aa11.76□□□□□ -0.53
HDAC9-207ENST00000413509 CFAP65Q6ZU64 1925 aaKnown RBP11.75□□□□□ -0.53
HDAC9-207ENST00000413509 KIAA1210Q9ULL0 1709 aa11.74□□□□□ -0.53
HDAC9-207ENST00000413509 PPLO60437 1756 aa11.73□□□□□ -0.53
HDAC9-207ENST00000413509 DCAF11Q8TEB1 546 aa11.73□□□□□ -0.53
HDAC9-207ENST00000413509 TMEM131LA2VDJ0 1609 aa11.72□□□□□ -0.53
HDAC9-207ENST00000413509 SLC52A1Q9NWF4 448 aa11.71□□□□□ -0.53
HDAC9-207ENST00000413509 POLR1AO95602 1720 aaPredicted RBP11.71□□□□□ -0.54
HDAC9-207ENST00000413509 HSPA5P11021 654 aaKnown RBP11.7□□□□□ -0.54
HDAC9-207ENST00000413509 RGL3Q3MIN7 710 aa11.7□□□□□ -0.54
HDAC9-207ENST00000413509 NEXMIFQ5QGS0 1516 aa11.7□□□□□ -0.54
HDAC9-207ENST00000413509 KDM5AP29375 1690 aaKnown RBP11.69□□□□□ -0.54
HDAC9-207ENST00000413509 RPGRIP1LQ68CZ1 1315 aa11.69□□□□□ -0.54
HDAC9-207ENST00000413509 EIF4G2P78344 907 aaKnown RBP eCLIP11.69□□□□□ -0.54
HDAC9-207ENST00000413509 DIEXFQ68CQ4 756 aaKnown RBP11.69□□□□□ -0.54
HDAC9-207ENST00000413509 ZFYVE9O95405 1425 aa11.69□□□□□ -0.54
HDAC9-207ENST00000413509 ZMYM3Q14202 1370 aa11.68□□□□□ -0.54
HDAC9-207ENST00000413509 USP47Q96K76 1375 aa11.68□□□□□ -0.54
HDAC9-207ENST00000413509 MYO5BQ9ULV0 1848 aa11.68□□□□□ -0.54
HDAC9-207ENST00000413509 FER1L4A9Z1Z3 1794 aa11.68□□□□□ -0.54
HDAC9-207ENST00000413509 IQGAP1P46940 1657 aa11.68□□□□□ -0.54
HDAC9-207ENST00000413509 KDM2AQ9Y2K7 1162 aa11.67□□□□□ -0.54
HDAC9-207ENST00000413509 PIK3C2GO75747 1445 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms