RNA–Protein interactions for RNA: ENST00000413305.5

SSUH2-203, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 1 (best)

Gene SSUH2, Length 1,874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-203ENST00000413305 DDX10Q13206 875 aaKnown RBP18.46■□□□□ 0.55
SSUH2-203ENST00000413305 FAM135AQ9P2D6 1515 aa18.45■□□□□ 0.54
SSUH2-203ENST00000413305 MAGI2Q86UL8 1455 aa18.45■□□□□ 0.54
SSUH2-203ENST00000413305 IPO9Q96P70 1041 aaKnown RBP18.45■□□□□ 0.54
SSUH2-203ENST00000413305 IQGAP3Q86VI3 1631 aa18.44■□□□□ 0.54
SSUH2-203ENST00000413305 EFCAB2Q5VUJ9 269 aa18.44■□□□□ 0.54
SSUH2-203ENST00000413305 ERBINQ96RT1 1412 aa18.44■□□□□ 0.54
SSUH2-203ENST00000413305 PKD2Q13563 968 aa18.43■□□□□ 0.54
SSUH2-203ENST00000413305 IL27Q8NEV9 243 aa18.43■□□□□ 0.54
SSUH2-203ENST00000413305 ZBTB47Q9UFB7 747 aaPredicted RBP18.43■□□□□ 0.54
SSUH2-203ENST00000413305 WASHC2AQ641Q2 1341 aa18.43■□□□□ 0.54
SSUH2-203ENST00000413305 GLIPR1L2Q4G1C9 344 aa18.41■□□□□ 0.54
SSUH2-203ENST00000413305 PKNOX2Q96KN3 472 aa18.41■□□□□ 0.54
SSUH2-203ENST00000413305 RTEL1-TNFRSF6BF6WH68 1400 aa18.41■□□□□ 0.54
SSUH2-203ENST00000413305 POLR1AO95602 1720 aaPredicted RBP18.41■□□□□ 0.54
SSUH2-203ENST00000413305 OSCARQ8IYS5 282 aa18.39■□□□□ 0.53
SSUH2-203ENST00000413305 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.39■□□□□ 0.53
SSUH2-203ENST00000413305 UHRF1BP1Q6BDS2 1440 aa18.39■□□□□ 0.53
SSUH2-203ENST00000413305 ZFYVE16Q7Z3T8 1539 aa18.39■□□□□ 0.53
SSUH2-203ENST00000413305 EIF4G2P78344 907 aaKnown RBP eCLIP18.37■□□□□ 0.53
SSUH2-203ENST00000413305 INO80Q9ULG1 1556 aaPredicted RBP18.36■□□□□ 0.53
SSUH2-203ENST00000413305 SPATA31E1Q6ZUB1 1445 aa18.36■□□□□ 0.53
SSUH2-203ENST00000413305 TRAPPC8Q9Y2L5 1435 aa18.36■□□□□ 0.53
SSUH2-203ENST00000413305 WASHC2CQ9Y4E1 1318 aa18.36■□□□□ 0.53
SSUH2-203ENST00000413305 PAK3O75914 559 aaPredicted RBP18.36■□□□□ 0.53
SSUH2-203ENST00000413305 ASXL2Q76L83 1435 aa18.36■□□□□ 0.53
SSUH2-203ENST00000413305 HSPA5P11021 654 aaKnown RBP18.35■□□□□ 0.53
SSUH2-203ENST00000413305 NBPF8Q3BBV2 869 aa18.35■□□□□ 0.53
SSUH2-203ENST00000413305 RSPH6AQ9H0K4 717 aa18.35■□□□□ 0.53
SSUH2-203ENST00000413305 HIRIP3Q9BW71 556 aaPredicted RBP18.35■□□□□ 0.53
SSUH2-203ENST00000413305 FANCAO15360 1455 aa18.34■□□□□ 0.53
SSUH2-203ENST00000413305 ATP10AO60312 1499 aa18.33■□□□□ 0.53
SSUH2-203ENST00000413305 DEPDC5O75140 1603 aa18.33■□□□□ 0.52
SSUH2-203ENST00000413305 RALGAPBQ86X10 1494 aa18.32■□□□□ 0.52
SSUH2-203ENST00000413305 RTN4Q9NQC3 1192 aaKnown RBP18.31■□□□□ 0.52
SSUH2-203ENST00000413305 PPM1GO15355 546 aaPredicted RBP18.31■□□□□ 0.52
SSUH2-203ENST00000413305 HNRNPUQ00839 825 aaKnown RBP eCLIP18.31■□□□□ 0.52
SSUH2-203ENST00000413305 CFAP74Q9C0B2 1584 aa18.3■□□□□ 0.52
SSUH2-203ENST00000413305 ATP7AQ04656 1500 aa18.3■□□□□ 0.52
SSUH2-203ENST00000413305 EIF2AK4Q9P2K8 1649 aaKnown RBP18.29■□□□□ 0.52
SSUH2-203ENST00000413305 KDM5CP41229 1560 aa18.28■□□□□ 0.52
SSUH2-203ENST00000413305 ADGRL1O94910 1474 aa18.27■□□□□ 0.52
SSUH2-203ENST00000413305 PLA2R1Q13018 1463 aa18.27■□□□□ 0.52
SSUH2-203ENST00000413305 CCDC144AA2RUR9 1427 aa18.26■□□□□ 0.51
SSUH2-203ENST00000413305 SPAG9O60271 1321 aaKnown RBP18.26■□□□□ 0.51
SSUH2-203ENST00000413305 CCDC7Q96M83 1385 aa18.25■□□□□ 0.51
SSUH2-203ENST00000413305 CNTLNQ9NXG0 1405 aa18.25■□□□□ 0.51
SSUH2-203ENST00000413305 IRX6P78412 446 aaPredicted RBP18.24■□□□□ 0.51
SSUH2-203ENST00000413305 VWDEQ8N2E2 1590 aa18.24■□□□□ 0.51
SSUH2-203ENST00000413305 TET3O43151 1660 aa18.22■□□□□ 0.51
SSUH2-203ENST00000413305 SCAPERQ9BY12 1400 aa18.21■□□□□ 0.51
SSUH2-203ENST00000413305 PRDM15P57071 1507 aaPredicted RBP18.21■□□□□ 0.51
SSUH2-203ENST00000413305 LAMC1P11047 1609 aa18.21■□□□□ 0.51
SSUH2-203ENST00000413305 E9PCH4 1651 aa18.21■□□□□ 0.51
SSUH2-203ENST00000413305 TRPM1Q7Z4N2 1603 aa18.2■□□□□ 0.5
SSUH2-203ENST00000413305 USP47Q96K76 1375 aa18.2■□□□□ 0.5
SSUH2-203ENST00000413305 KIDINS220Q9ULH0 1771 aa18.2■□□□□ 0.5
SSUH2-203ENST00000413305 ZNF518AQ6AHZ1 1483 aa18.2■□□□□ 0.5
SSUH2-203ENST00000413305 NPM1P06748 294 aaKnown RBP eCLIP18.2■□□□□ 0.5
SSUH2-203ENST00000413305 AFAP1Q8N556 730 aa18.19■□□□□ 0.5
SSUH2-203ENST00000413305 TRPM2O94759 1503 aa18.19■□□□□ 0.5
SSUH2-203ENST00000413305 ARID4BQ4LE39 1312 aaPredicted RBP18.18■□□□□ 0.5
SSUH2-203ENST00000413305 NEFMP07197 916 aa18.18■□□□□ 0.5
SSUH2-203ENST00000413305 B4GALNT3Q6L9W6 998 aa18.18■□□□□ 0.5
SSUH2-203ENST00000413305 SPHKAPQ2M3C7 1700 aa18.18■□□□□ 0.5
SSUH2-203ENST00000413305 BCORL1Q5H9F3 1711 aa18.18■□□□□ 0.5
SSUH2-203ENST00000413305 PRAG1Q86YV5 1406 aa18.17■□□□□ 0.5
SSUH2-203ENST00000413305 MROH1Q8NDA8 1641 aa18.17■□□□□ 0.5
SSUH2-203ENST00000413305 A2MP01023 1474 aa18.17■□□□□ 0.5
SSUH2-203ENST00000413305 NEURL4Q96JN8 1562 aa18.16■□□□□ 0.5
SSUH2-203ENST00000413305 PTPRTO14522 1441 aa18.16■□□□□ 0.5
SSUH2-203ENST00000413305 CEP152O94986 1710 aa18.15■□□□□ 0.5
SSUH2-203ENST00000413305 DHX29Q7Z478 1369 aaKnown RBP18.15■□□□□ 0.5
SSUH2-203ENST00000413305 KIF7Q2M1P5 1343 aa18.15■□□□□ 0.5
SSUH2-203ENST00000413305 CD109Q6YHK3 1445 aa18.15■□□□□ 0.5
SSUH2-203ENST00000413305 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.15■□□□□ 0.51e-6■□□□□ 11.3
SSUH2-203ENST00000413305 RNF17Q9BXT8 1623 aaKnown RBP18.15■□□□□ 0.5
SSUH2-203ENST00000413305 POGZQ7Z3K3 1410 aa18.14■□□□□ 0.49
SSUH2-203ENST00000413305 GPRASP1Q5JY77 1395 aa18.14■□□□□ 0.49
SSUH2-203ENST00000413305 FAM43AQ8N2R8 423 aa18.14■□□□□ 0.49
SSUH2-203ENST00000413305 ZBED9Q6R2W3 1325 aa18.13■□□□□ 0.49
SSUH2-203ENST00000413305 NEO1Q92859 1461 aa18.13■□□□□ 0.49
SSUH2-203ENST00000413305 MLH3Q9UHC1 1453 aa18.12■□□□□ 0.49
SSUH2-203ENST00000413305 HECW2Q9P2P5 1572 aa18.12■□□□□ 0.49
SSUH2-203ENST00000413305 SLC24A1O60721 1099 aa18.12■□□□□ 0.49
SSUH2-203ENST00000413305 GSE1Q14687 1217 aa18.12■□□□□ 0.49
SSUH2-203ENST00000413305 LMTK2Q8IWU2 1503 aa18.11■□□□□ 0.49
SSUH2-203ENST00000413305 KANK1Q14678 1352 aa18.11■□□□□ 0.49
SSUH2-203ENST00000413305 DCAF11Q8TEB1 546 aa18.11■□□□□ 0.49
SSUH2-203ENST00000413305 DAXXQ9UER7 740 aaPredicted RBP18.1■□□□□ 0.49
SSUH2-203ENST00000413305 ROCK2O75116 1388 aaKnown RBP18.09■□□□□ 0.49
SSUH2-203ENST00000413305 ZNF326Q5BKZ1 582 aaKnown RBP18.09■□□□□ 0.49
SSUH2-203ENST00000413305 MAP3K4Q9Y6R4 1608 aa18.09■□□□□ 0.49
SSUH2-203ENST00000413305 EFCAB6Q5THR3 1501 aa18.08■□□□□ 0.49
SSUH2-203ENST00000413305 CLTCL1P53675 1640 aa18.08■□□□□ 0.49
SSUH2-203ENST00000413305 CARD11Q9BXL7 1154 aa18.08■□□□□ 0.49
SSUH2-203ENST00000413305 GLI2P10070 1586 aa18.08■□□□□ 0.48
SSUH2-203ENST00000413305 DDRGK1Q96HY6 314 aa18.07■□□□□ 0.48
SSUH2-203ENST00000413305 FRMPD1Q5SYB0 1578 aa18.06■□□□□ 0.48
SSUH2-203ENST00000413305 MADDQ8WXG6 1647 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms