RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 BCORL1Q5H9F3 1711 aa15.76■□□□□ 0.11
TRAFD1-202ENST00000412615 FAM9BQ8IZU0 186 aa15.75■□□□□ 0.11
TRAFD1-202ENST00000412615 POLR3GLQ9BT43 218 aa15.75■□□□□ 0.11
TRAFD1-202ENST00000412615 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.74■□□□□ 0.115e-6■■■□□ 14.8
TRAFD1-202ENST00000412615 DHX29Q7Z478 1369 aaKnown RBP15.74■□□□□ 0.11
TRAFD1-202ENST00000412615 DUOX2Q9NRD8 1548 aa15.74■□□□□ 0.11
TRAFD1-202ENST00000412615 ZCCHC11Q5TAX3 1644 aaKnown RBP15.74■□□□□ 0.11
TRAFD1-202ENST00000412615 ERBINQ96RT1 1412 aa15.72■□□□□ 0.11
TRAFD1-202ENST00000412615 ST20-MTHFSA0A0A6YYL1 179 aa15.71■□□□□ 0.11
TRAFD1-202ENST00000412615 TSHZ2Q9NRE2 1034 aa15.71■□□□□ 0.11
TRAFD1-202ENST00000412615 ZBED9Q6R2W3 1325 aa15.71■□□□□ 0.11
TRAFD1-202ENST00000412615 IQGAP3Q86VI3 1631 aa15.71■□□□□ 0.1
TRAFD1-202ENST00000412615 PLA2R1Q13018 1463 aa15.7■□□□□ 0.1
TRAFD1-202ENST00000412615 PRAG1Q86YV5 1406 aa15.69■□□□□ 0.1
TRAFD1-202ENST00000412615 MAGI2Q86UL8 1455 aa15.68■□□□□ 0.1
TRAFD1-202ENST00000412615 ABCC1P33527 1531 aa15.68■□□□□ 0.1
TRAFD1-202ENST00000412615 RGL3Q3MIN7 710 aa15.68■□□□□ 0.1
TRAFD1-202ENST00000412615 ATP10AO60312 1499 aa15.67■□□□□ 0.1
TRAFD1-202ENST00000412615 ARAP3Q8WWN8 1544 aa15.66■□□□□ 0.1
TRAFD1-202ENST00000412615 TRAPPC8Q9Y2L5 1435 aa15.66■□□□□ 0.1
TRAFD1-202ENST00000412615 ERICH6BQ5W0A0 696 aa15.65■□□□□ 0.1
TRAFD1-202ENST00000412615 TRPM1Q7Z4N2 1603 aa15.65■□□□□ 0.1
TRAFD1-202ENST00000412615 SPAG9O60271 1321 aaKnown RBP15.64■□□□□ 0.09
TRAFD1-202ENST00000412615 A2MP01023 1474 aa15.64■□□□□ 0.09
TRAFD1-202ENST00000412615 RTEL1-TNFRSF6BF6WH68 1400 aa15.64■□□□□ 0.09
TRAFD1-202ENST00000412615 GPRASP1Q5JY77 1395 aa15.64■□□□□ 0.09
TRAFD1-202ENST00000412615 KTN1Q86UP2 1357 aaKnown RBP15.64■□□□□ 0.09
TRAFD1-202ENST00000412615 CNGB1Q14028 1251 aaPredicted RBP15.62■□□□□ 0.09
TRAFD1-202ENST00000412615 RALBP1Q15311 655 aa15.61■□□□□ 0.09
TRAFD1-202ENST00000412615 NBPF1Q3BBV0 1214 aa15.61■□□□□ 0.09
TRAFD1-202ENST00000412615 SLC24A1O60721 1099 aa15.61■□□□□ 0.09
TRAFD1-202ENST00000412615 WDR7Q9Y4E6 1490 aa15.6■□□□□ 0.09
TRAFD1-202ENST00000412615 AFAP1Q8N556 730 aa15.6■□□□□ 0.09
TRAFD1-202ENST00000412615 TMC1Q8TDI8 760 aa15.6■□□□□ 0.09
TRAFD1-202ENST00000412615 LAMC1P11047 1609 aa15.59■□□□□ 0.09
TRAFD1-202ENST00000412615 EIF2AK4Q9P2K8 1649 aaKnown RBP15.59■□□□□ 0.09
TRAFD1-202ENST00000412615 PNISRQ8TF01 805 aaKnown RBP15.59■□□□□ 0.09
TRAFD1-202ENST00000412615 IRX6P78412 446 aaPredicted RBP15.58■□□□□ 0.08
TRAFD1-202ENST00000412615 MYBBP1AQ9BQG0 1328 aaKnown RBP15.58■□□□□ 0.08
TRAFD1-202ENST00000412615 ZFYVE16Q7Z3T8 1539 aa15.57■□□□□ 0.08
TRAFD1-202ENST00000412615 BRD4O60885 1362 aaPredicted RBP15.57■□□□□ 0.08
TRAFD1-202ENST00000412615 PRDM15P57071 1507 aaPredicted RBP15.57■□□□□ 0.08
TRAFD1-202ENST00000412615 E9PCH4 1651 aa15.56■□□□□ 0.08
TRAFD1-202ENST00000412615 FANCAO15360 1455 aa15.56■□□□□ 0.08
TRAFD1-202ENST00000412615 STAC3Q96MF2 364 aa15.55■□□□□ 0.08
TRAFD1-202ENST00000412615 SMG6Q86US8 1419 aaKnown RBP15.54■□□□□ 0.08
TRAFD1-202ENST00000412615 PPP4R2Q9NY27 417 aa15.54■□□□□ 0.08
TRAFD1-202ENST00000412615 TESK2Q96S53 571 aa15.54■□□□□ 0.08
TRAFD1-202ENST00000412615 COL17A1Q9UMD9 1497 aaPredicted RBP15.53■□□□□ 0.08
TRAFD1-202ENST00000412615 ABCA9Q8IUA7 1624 aa15.53■□□□□ 0.08
TRAFD1-202ENST00000412615 KANK1Q14678 1352 aa15.53■□□□□ 0.08
TRAFD1-202ENST00000412615 WASHC2CQ9Y4E1 1318 aa15.53■□□□□ 0.08
TRAFD1-202ENST00000412615 TMF1P82094 1093 aa15.52■□□□□ 0.08
TRAFD1-202ENST00000412615 PTPRTO14522 1441 aa15.52■□□□□ 0.07
TRAFD1-202ENST00000412615 TRPM2O94759 1503 aa15.52■□□□□ 0.07
TRAFD1-202ENST00000412615 ATP7AQ04656 1500 aa15.52■□□□□ 0.07
TRAFD1-202ENST00000412615 PER1O15534 1290 aaPredicted RBP15.51■□□□□ 0.07
TRAFD1-202ENST00000412615 NUDCQ9Y266 331 aa15.51■□□□□ 0.07
TRAFD1-202ENST00000412615 LRPPRCP42704 1394 aaKnown RBP15.51■□□□□ 0.07
TRAFD1-202ENST00000412615 DEPDC5O75140 1603 aa15.51■□□□□ 0.07
TRAFD1-202ENST00000412615 SCAPERQ9BY12 1400 aa15.51■□□□□ 0.07
TRAFD1-202ENST00000412615 MYT1Q01538 1121 aa15.51■□□□□ 0.07
TRAFD1-202ENST00000412615 NLRP13Q86W25 1043 aa15.51■□□□□ 0.07
TRAFD1-202ENST00000412615 ADGRL1O94910 1474 aa15.5■□□□□ 0.07
TRAFD1-202ENST00000412615 INO80Q9ULG1 1556 aaPredicted RBP15.5■□□□□ 0.07
TRAFD1-202ENST00000412615 MYT1LQ9UL68 1186 aa15.5■□□□□ 0.07
TRAFD1-202ENST00000412615 PARD3Q8TEW0 1356 aa15.5■□□□□ 0.07
TRAFD1-202ENST00000412615 DISP3Q9P2K9 1392 aa15.5■□□□□ 0.07
TRAFD1-202ENST00000412615 ASXL2Q76L83 1435 aa15.49■□□□□ 0.07
TRAFD1-202ENST00000412615 RNF17Q9BXT8 1623 aaKnown RBP15.48■□□□□ 0.07
TRAFD1-202ENST00000412615 TET3O43151 1660 aa15.48■□□□□ 0.07
TRAFD1-202ENST00000412615 KIF3BO15066 747 aa15.48■□□□□ 0.07
TRAFD1-202ENST00000412615 RBM19Q9Y4C8 960 aaKnown RBP15.47■□□□□ 0.07
TRAFD1-202ENST00000412615 SPHKAPQ2M3C7 1700 aa15.47■□□□□ 0.07
TRAFD1-202ENST00000412615 VWDEQ8N2E2 1590 aa15.46■□□□□ 0.07
TRAFD1-202ENST00000412615 NPM1P06748 294 aaKnown RBP eCLIP15.46■□□□□ 0.07
TRAFD1-202ENST00000412615 PANK3Q9H999 370 aa15.46■□□□□ 0.07
TRAFD1-202ENST00000412615 MADDQ8WXG6 1647 aa15.46■□□□□ 0.06
TRAFD1-202ENST00000412615 CEP152O94986 1710 aa15.46■□□□□ 0.06
TRAFD1-202ENST00000412615 CLTCL1P53675 1640 aa15.44■□□□□ 0.06
TRAFD1-202ENST00000412615 RNF123Q5XPI4 1314 aa15.44■□□□□ 0.06
TRAFD1-202ENST00000412615 CDCA8Q53HL2 280 aa15.43■□□□□ 0.06
TRAFD1-202ENST00000412615 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
TRAFD1-202ENST00000412615 SCAF11Q99590 1463 aaKnown RBP15.42■□□□□ 0.06
TRAFD1-202ENST00000412615 CC2D1BQ5T0F9 858 aaKnown RBP15.42■□□□□ 0.06
TRAFD1-202ENST00000412615 NEURL4Q96JN8 1562 aa15.42■□□□□ 0.06
TRAFD1-202ENST00000412615 IQGAP1P46940 1657 aa15.41■□□□□ 0.06
TRAFD1-202ENST00000412615 ZNF518AQ6AHZ1 1483 aa15.4■□□□□ 0.06
TRAFD1-202ENST00000412615 B4GALNT3Q6L9W6 998 aa15.4■□□□□ 0.06
TRAFD1-202ENST00000412615 INSRP06213 1382 aa15.39■□□□□ 0.05
TRAFD1-202ENST00000412615 MROH1Q8NDA8 1641 aa15.39■□□□□ 0.05
TRAFD1-202ENST00000412615 PDE3BQ13370 1112 aa15.39■□□□□ 0.05
TRAFD1-202ENST00000412615 EIF3AQ14152 1382 aaKnown RBP15.39■□□□□ 0.05
TRAFD1-202ENST00000412615 SENP3-EIF4A1A0A087X0R7 540 aa15.38■□□□□ 0.05
TRAFD1-202ENST00000412615 KIDINS220Q9ULH0 1771 aa15.37■□□□□ 0.05
TRAFD1-202ENST00000412615 KNSTRNQ9Y448 316 aa15.37■□□□□ 0.05
TRAFD1-202ENST00000412615 ZMYM4Q5VZL5 1548 aa15.37■□□□□ 0.05
TRAFD1-202ENST00000412615 KIAA1210Q9ULL0 1709 aa15.36■□□□□ 0.05
TRAFD1-202ENST00000412615 EFCAB6Q5THR3 1501 aa15.36■□□□□ 0.05
TRAFD1-202ENST00000412615 CD109Q6YHK3 1445 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms