RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 MAP3K9P80192 1104 aa10.75□□□□□ -0.69
LINC00342-201ENST00000412393 DDX27Q96GQ7 796 aaKnown RBP10.75□□□□□ -0.69
LINC00342-201ENST00000412393 ONECUT3O60422 494 aaPredicted RBP10.73□□□□□ -0.69
LINC00342-201ENST00000412393 MFSD10Q14728 455 aa10.71□□□□□ -0.69
LINC00342-201ENST00000412393 SOWAHBA6NEL2 793 aa10.7□□□□□ -0.7
LINC00342-201ENST00000412393 LARP6Q9BRS8 491 aaKnown RBP10.7□□□□□ -0.7
LINC00342-201ENST00000412393 PHF14O94880 888 aa10.69□□□□□ -0.7
LINC00342-201ENST00000412393 TYW1BQ6NUM6 668 aa10.69□□□□□ -0.7
LINC00342-201ENST00000412393 PCDHGA10Q9Y5H3 936 aa10.69□□□□□ -0.7
LINC00342-201ENST00000412393 MYO15BQ96JP2 1530 aa10.68□□□□□ -0.7
LINC00342-201ENST00000412393 UNC13AQ9UPW8 1703 aa10.68□□□□□ -0.7
LINC00342-201ENST00000412393 LAPTM4AQ15012 233 aa10.67□□□□□ -0.7
LINC00342-201ENST00000412393 KCNC4Q03721 635 aa10.66□□□□□ -0.7
LINC00342-201ENST00000412393 ZFRQ96KR1 1074 aaKnown RBP10.65□□□□□ -0.7
LINC00342-201ENST00000412393 ZCCHC6Q5VYS8 1495 aaKnown RBP10.64□□□□□ -0.71
LINC00342-201ENST00000412393 PROX2Q3B8N5 592 aa10.64□□□□□ -0.71
LINC00342-201ENST00000412393 EPAS1Q99814 870 aa10.64□□□□□ -0.71
LINC00342-201ENST00000412393 COL9A1P20849 921 aa10.63□□□□□ -0.71
LINC00342-201ENST00000412393 BCAMP50895 628 aa10.63□□□□□ -0.71
LINC00342-201ENST00000412393 Q6ZNB5 142 aa10.63□□□□□ -0.71
LINC00342-201ENST00000412393 GTPBP6O43824 516 aaPredicted RBP10.62□□□□□ -0.71
LINC00342-201ENST00000412393 EMILIN3Q9NT22 766 aa10.62□□□□□ -0.71
LINC00342-201ENST00000412393 KIAA1468Q9P260 1216 aa10.61□□□□□ -0.71
LINC00342-201ENST00000412393 FAM98CQ17RN3 349 aaKnown RBP10.6□□□□□ -0.71
LINC00342-201ENST00000412393 DCAF1Q9Y4B6 1507 aa10.59□□□□□ -0.71
LINC00342-201ENST00000412393 WBP1LQ9NX94 342 aa10.58□□□□□ -0.72
LINC00342-201ENST00000412393 TSR3Q9UJK0 312 aaKnown RBP10.58□□□□□ -0.72
LINC00342-201ENST00000412393 C6orf132Q5T0Z8 1188 aa10.57□□□□□ -0.72
LINC00342-201ENST00000412393 TRIM6-TRIM34B2RNG4 842 aa10.56□□□□□ -0.72
LINC00342-201ENST00000412393 LRCH3Q96II8 777 aa10.55□□□□□ -0.72
LINC00342-201ENST00000412393 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.55□□□□□ -0.72
LINC00342-201ENST00000412393 BICRAQ9NZM4 1560 aa10.53□□□□□ -0.72
LINC00342-201ENST00000412393 CAMK2BQ13554 666 aa10.53□□□□□ -0.72
LINC00342-201ENST00000412393 SEPT9Q9UHD8 586 aaPredicted RBP10.51□□□□□ -0.73
LINC00342-201ENST00000412393 PACS2Q86VP3 889 aa10.5□□□□□ -0.73
LINC00342-201ENST00000412393 HPS5Q9UPZ3 1129 aa10.5□□□□□ -0.73
LINC00342-201ENST00000412393 TRAF7Q6Q0C0 670 aa10.46□□□□□ -0.73
LINC00342-201ENST00000412393 SCRIBQ14160 1630 aa10.46□□□□□ -0.74
LINC00342-201ENST00000412393 GFRA3O60609 400 aa10.45□□□□□ -0.74
LINC00342-201ENST00000412393 PPP4CP60510 307 aa10.45□□□□□ -0.74
LINC00342-201ENST00000412393 V9GY48 417 aaPredicted RBP10.44□□□□□ -0.74
LINC00342-201ENST00000412393 DPYSL4O14531 572 aa10.43□□□□□ -0.74
LINC00342-201ENST00000412393 CERKQ8TCT0 537 aa10.43□□□□□ -0.74
LINC00342-201ENST00000412393 NRG2O14511 850 aaPredicted RBP10.42□□□□□ -0.74
LINC00342-201ENST00000412393 EN1Q05925 392 aaPredicted RBP10.42□□□□□ -0.74
LINC00342-201ENST00000412393 TJAP1Q5JTD0 557 aa10.4□□□□□ -0.74
LINC00342-201ENST00000412393 CADPS2Q86UW7 1296 aa10.4□□□□□ -0.74
LINC00342-201ENST00000412393 RBM33Q96EV2 1170 aaKnown RBP10.4□□□□□ -0.74
LINC00342-201ENST00000412393 IL21Q9HBE4 155 aa10.4□□□□□ -0.74
LINC00342-201ENST00000412393 SHROOM4Q9ULL8 1493 aa10.39□□□□□ -0.75
LINC00342-201ENST00000412393 NECTIN2Q92692 538 aa10.39□□□□□ -0.75
LINC00342-201ENST00000412393 TSKSQ9UJT2 592 aa10.39□□□□□ -0.75
LINC00342-201ENST00000412393 SPDYE16A6NNV3 312 aaPredicted RBP10.38□□□□□ -0.75
LINC00342-201ENST00000412393 MAP3K7O43318 606 aa10.38□□□□□ -0.75
LINC00342-201ENST00000412393 DDX12PQ92771 950 aa10.38□□□□□ -0.75
LINC00342-201ENST00000412393 PRKD2Q9BZL6 878 aa10.38□□□□□ -0.75
LINC00342-201ENST00000412393 PDIA6Q15084 440 aa10.37□□□□□ -0.75
LINC00342-201ENST00000412393 NBR1Q14596 966 aa10.36□□□□□ -0.75
LINC00342-201ENST00000412393 HDGFP51858 240 aaKnown RBP10.35□□□□□ -0.75
LINC00342-201ENST00000412393 PRSS12P56730 875 aa10.35□□□□□ -0.75
LINC00342-201ENST00000412393 CDCA7LQ96GN5 454 aa10.35□□□□□ -0.75
LINC00342-201ENST00000412393 NBPF26B4DH59 902 aa10.34□□□□□ -0.75
LINC00342-201ENST00000412393 LCE2BO14633 110 aa10.34□□□□□ -0.75
LINC00342-201ENST00000412393 SAMD7Q7Z3H4 446 aa10.34□□□□□ -0.75
LINC00342-201ENST00000412393 MTRQ99707 1265 aa10.34□□□□□ -0.75
LINC00342-201ENST00000412393 GGCXP38435 758 aa10.32□□□□□ -0.76
LINC00342-201ENST00000412393 TSR1Q2NL82 804 aaKnown RBP10.32□□□□□ -0.76
LINC00342-201ENST00000412393 PPP1R18Q6NYC8 613 aa10.32□□□□□ -0.76
LINC00342-201ENST00000412393 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.32□□□□□ -0.76
LINC00342-201ENST00000412393 RBM27Q9P2N5 1060 aaKnown RBP10.32□□□□□ -0.76
LINC00342-201ENST00000412393 TATDN2Q93075 761 aa10.29□□□□□ -0.76
LINC00342-201ENST00000412393 TMUB1Q9BVT8 246 aa10.28□□□□□ -0.76
LINC00342-201ENST00000412393 CC2D2AQ9P2K1 1620 aa10.27□□□□□ -0.77
LINC00342-201ENST00000412393 ARIH1Q9Y4X5 557 aaPredicted RBP10.27□□□□□ -0.77
LINC00342-201ENST00000412393 EIF4G1Q04637 1599 aaKnown RBP10.26□□□□□ -0.77
LINC00342-201ENST00000412393 PNMA3Q9UL41 463 aa10.26□□□□□ -0.77
LINC00342-201ENST00000412393 PDZRN3Q9UPQ7 1066 aa10.26□□□□□ -0.77
LINC00342-201ENST00000412393 SMAPO00193 183 aa10.24□□□□□ -0.77
LINC00342-201ENST00000412393 SLC4A3P48751 1232 aa10.24□□□□□ -0.77
LINC00342-201ENST00000412393 ZNF787Q6DD87 383 aa10.23□□□□□ -0.77
LINC00342-201ENST00000412393 PRR14Q9BWN1 585 aa10.23□□□□□ -0.77
LINC00342-201ENST00000412393 FAM198AQ9UFP1 575 aa10.23□□□□□ -0.77
LINC00342-201ENST00000412393 SLF2Q8IX21 1173 aa10.22□□□□□ -0.77
LINC00342-201ENST00000412393 APLP1P51693 650 aa10.21□□□□□ -0.77
LINC00342-201ENST00000412393 ZNF516Q92618 1163 aa10.21□□□□□ -0.77
LINC00342-201ENST00000412393 CECR2Q9BXF3 1484 aa10.2□□□□□ -0.78
LINC00342-201ENST00000412393 RNF40O75150 1001 aa10.19□□□□□ -0.78
LINC00342-201ENST00000412393 NUDT18Q6ZVK8 323 aa10.19□□□□□ -0.78
LINC00342-201ENST00000412393 E2F4Q16254 413 aa10.18□□□□□ -0.78
LINC00342-201ENST00000412393 GRXCR2A6NFK2 248 aa10.15□□□□□ -0.78
LINC00342-201ENST00000412393 C3orf80F5H4A9 247 aa10.15□□□□□ -0.78
LINC00342-201ENST00000412393 ZPR1O75312 459 aa10.15□□□□□ -0.78
LINC00342-201ENST00000412393 TTC13Q8NBP0 860 aa10.15□□□□□ -0.78
LINC00342-201ENST00000412393 BBXQ8WY36 941 aaPredicted RBP10.15□□□□□ -0.78
LINC00342-201ENST00000412393 NKX2-3Q8TAU0 364 aa10.14□□□□□ -0.79
LINC00342-201ENST00000412393 OSBPP22059 807 aa10.13□□□□□ -0.79
LINC00342-201ENST00000412393 PRIM1P49642 420 aaKnown RBP10.12□□□□□ -0.79
LINC00342-201ENST00000412393 SWT1Q5T5J6 900 aaKnown RBP10.12□□□□□ -0.79
LINC00342-201ENST00000412393 ZNF775Q96BV0 537 aaPredicted RBP10.12□□□□□ -0.79
LINC00342-201ENST00000412393 DGAT1O75907 488 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms