RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 PKD2Q13563 968 aa18.08■□□□□ 0.48
CLINT1-201ENST00000411809 PLCH2O75038 1416 aa18.08■□□□□ 0.48
CLINT1-201ENST00000411809 DUOX2Q9NRD8 1548 aa18.07■□□□□ 0.48
CLINT1-201ENST00000411809 ABCA9Q8IUA7 1624 aa18.07■□□□□ 0.48
CLINT1-201ENST00000411809 HNRNPMP52272 730 aaKnown RBP eCLIP18.07■□□□□ 0.48
CLINT1-201ENST00000411809 MSH5O43196 834 aa18.07■□□□□ 0.48
CLINT1-201ENST00000411809 NUP155O75694 1391 aa18.06■□□□□ 0.48
CLINT1-201ENST00000411809 KIF7Q2M1P5 1343 aa18.04■□□□□ 0.48
CLINT1-201ENST00000411809 ERBINQ96RT1 1412 aa18.04■□□□□ 0.48
CLINT1-201ENST00000411809 DHX29Q7Z478 1369 aaKnown RBP18.04■□□□□ 0.48
CLINT1-201ENST00000411809 ERICH6Q7L0X2 663 aa18.03■□□□□ 0.48
CLINT1-201ENST00000411809 RNF17Q9BXT8 1623 aaKnown RBP18.02■□□□□ 0.47
CLINT1-201ENST00000411809 INO80Q9ULG1 1556 aaPredicted RBP18.01■□□□□ 0.47
CLINT1-201ENST00000411809 ZFYVE16Q7Z3T8 1539 aa18.01■□□□□ 0.47
CLINT1-201ENST00000411809 SENP3-EIF4A1A0A087X0R7 540 aa18.01■□□□□ 0.47
CLINT1-201ENST00000411809 TSPY4P0CV99 314 aa18■□□□□ 0.47
CLINT1-201ENST00000411809 TSPY10P0CW01 314 aa18■□□□□ 0.47
CLINT1-201ENST00000411809 USP47Q96K76 1375 aa17.99■□□□□ 0.47
CLINT1-201ENST00000411809 ARID4BQ4LE39 1312 aaPredicted RBP17.99■□□□□ 0.47
CLINT1-201ENST00000411809 VWDEQ8N2E2 1590 aa17.99■□□□□ 0.47
CLINT1-201ENST00000411809 PRDM15P57071 1507 aaPredicted RBP17.97■□□□□ 0.47
CLINT1-201ENST00000411809 PRAG1Q86YV5 1406 aa17.97■□□□□ 0.47
CLINT1-201ENST00000411809 PRKRIP1Q9H875 184 aaPredicted RBP17.97■□□□□ 0.47
CLINT1-201ENST00000411809 CEP152O94986 1710 aa17.96■□□□□ 0.47
CLINT1-201ENST00000411809 RTEL1-TNFRSF6BF6WH68 1400 aa17.96■□□□□ 0.47
CLINT1-201ENST00000411809 A2MP01023 1474 aa17.96■□□□□ 0.46
CLINT1-201ENST00000411809 GPRASP1Q5JY77 1395 aa17.95■□□□□ 0.46
CLINT1-201ENST00000411809 TRAPPC8Q9Y2L5 1435 aa17.94■□□□□ 0.46
CLINT1-201ENST00000411809 CCDC184Q52MB2 194 aa17.94■□□□□ 0.46
CLINT1-201ENST00000411809 EIF2AK4Q9P2K8 1649 aaKnown RBP17.93■□□□□ 0.46
CLINT1-201ENST00000411809 NEURL4Q96JN8 1562 aa17.93■□□□□ 0.46
CLINT1-201ENST00000411809 MROH1Q8NDA8 1641 aa17.93■□□□□ 0.46
CLINT1-201ENST00000411809 SPHKAPQ2M3C7 1700 aa17.92■□□□□ 0.46
CLINT1-201ENST00000411809 WDR7Q9Y4E6 1490 aa17.92■□□□□ 0.46
CLINT1-201ENST00000411809 POLR3GLQ9BT43 218 aa17.91■□□□□ 0.46
CLINT1-201ENST00000411809 TET3O43151 1660 aa17.9■□□□□ 0.46
CLINT1-201ENST00000411809 TRPM2O94759 1503 aa17.9■□□□□ 0.46
CLINT1-201ENST00000411809 MADDQ8WXG6 1647 aa17.89■□□□□ 0.45
CLINT1-201ENST00000411809 IQGAP1P46940 1657 aa17.89■□□□□ 0.45
CLINT1-201ENST00000411809 FAM9BQ8IZU0 186 aa17.88■□□□□ 0.45
CLINT1-201ENST00000411809 CCDC144AA2RUR9 1427 aa17.87■□□□□ 0.45
CLINT1-201ENST00000411809 PTPRTO14522 1441 aa17.86■□□□□ 0.45
CLINT1-201ENST00000411809 B4GALNT3Q6L9W6 998 aa17.85■□□□□ 0.45
CLINT1-201ENST00000411809 ATP7AQ04656 1500 aa17.85■□□□□ 0.45
CLINT1-201ENST00000411809 ROCK2O75116 1388 aaKnown RBP17.85■□□□□ 0.45
CLINT1-201ENST00000411809 IFT172Q9UG01 1749 aa17.85■□□□□ 0.45
CLINT1-201ENST00000411809 CLTCL1P53675 1640 aa17.85■□□□□ 0.45
CLINT1-201ENST00000411809 KIDINS220Q9ULH0 1771 aa17.84■□□□□ 0.45
CLINT1-201ENST00000411809 KIAA1210Q9ULL0 1709 aa17.83■□□□□ 0.44
CLINT1-201ENST00000411809 COL17A1Q9UMD9 1497 aaPredicted RBP17.81■□□□□ 0.44
CLINT1-201ENST00000411809 EFCAB2Q5VUJ9 269 aa17.81■□□□□ 0.44
CLINT1-201ENST00000411809 FANCAO15360 1455 aa17.79■□□□□ 0.44
CLINT1-201ENST00000411809 ZBED9Q6R2W3 1325 aa17.77■□□□□ 0.44
CLINT1-201ENST00000411809 FANCIQ9NVI1 1328 aa17.77■□□□□ 0.44
CLINT1-201ENST00000411809 DCAF11Q8TEB1 546 aa17.77■□□□□ 0.43
CLINT1-201ENST00000411809 LMTK2Q8IWU2 1503 aa17.77■□□□□ 0.43
CLINT1-201ENST00000411809 NBR1Q14596 966 aa17.76■□□□□ 0.43
CLINT1-201ENST00000411809 CARD11Q9BXL7 1154 aa17.76■□□□□ 0.43
CLINT1-201ENST00000411809 KTN1Q86UP2 1357 aaKnown RBP17.76■□□□□ 0.43
CLINT1-201ENST00000411809 ASXL2Q76L83 1435 aa17.75■□□□□ 0.43
CLINT1-201ENST00000411809 CFAP74Q9C0B2 1584 aa17.75■□□□□ 0.43
CLINT1-201ENST00000411809 LRPPRCP42704 1394 aaKnown RBP17.75■□□□□ 0.43
CLINT1-201ENST00000411809 MRS2Q9HD23 443 aa17.75■□□□□ 0.43
CLINT1-201ENST00000411809 ST20-MTHFSA0A0A6YYL1 179 aa17.74■□□□□ 0.43
CLINT1-201ENST00000411809 MYOM1P52179 1685 aa17.74■□□□□ 0.43
CLINT1-201ENST00000411809 PPRC1Q5VV67 1664 aaKnown RBP17.74■□□□□ 0.43
CLINT1-201ENST00000411809 PPP4R2Q9NY27 417 aa17.74■□□□□ 0.43
CLINT1-201ENST00000411809 EFCAB6Q5THR3 1501 aa17.73■□□□□ 0.43
CLINT1-201ENST00000411809 FRMPD1Q5SYB0 1578 aa17.73■□□□□ 0.43
CLINT1-201ENST00000411809 MROH2AA6NES4 1674 aa17.72■□□□□ 0.43
CLINT1-201ENST00000411809 TESK2Q96S53 571 aa17.72■□□□□ 0.43
CLINT1-201ENST00000411809 SCAPERQ9BY12 1400 aa17.72■□□□□ 0.43
CLINT1-201ENST00000411809 ADGRL1O94910 1474 aa17.71■□□□□ 0.43
CLINT1-201ENST00000411809 PARD3Q8TEW0 1356 aa17.7■□□□□ 0.42
CLINT1-201ENST00000411809 ZNF326Q5BKZ1 582 aaKnown RBP17.69■□□□□ 0.42
CLINT1-201ENST00000411809 ZMYM4Q5VZL5 1548 aa17.69■□□□□ 0.42
CLINT1-201ENST00000411809 NBPF1Q3BBV0 1214 aa17.69■□□□□ 0.42
CLINT1-201ENST00000411809 MYO3AQ8NEV4 1616 aa17.69■□□□□ 0.42
CLINT1-201ENST00000411809 NRXN1Q9ULB1 1477 aa17.69■□□□□ 0.42
CLINT1-201ENST00000411809 SPAG9O60271 1321 aaKnown RBP17.69■□□□□ 0.42
CLINT1-201ENST00000411809 MAP3K4Q9Y6R4 1608 aa17.68■□□□□ 0.42
CLINT1-201ENST00000411809 DEKP35659 375 aaKnown RBP17.68■□□□□ 0.42
CLINT1-201ENST00000411809 KIF1BO60333 1816 aa17.68■□□□□ 0.42
CLINT1-201ENST00000411809 PER1O15534 1290 aaPredicted RBP17.68■□□□□ 0.42
CLINT1-201ENST00000411809 AFAP1Q8N556 730 aa17.68■□□□□ 0.42
CLINT1-201ENST00000411809 DISP3Q9P2K9 1392 aa17.67■□□□□ 0.42
CLINT1-201ENST00000411809 SMG6Q86US8 1419 aaKnown RBP17.67■□□□□ 0.42
CLINT1-201ENST00000411809 MYOM2P54296 1465 aa17.67■□□□□ 0.42
CLINT1-201ENST00000411809 KDM2AQ9Y2K7 1162 aa17.67■□□□□ 0.42
CLINT1-201ENST00000411809 ABCA6Q8N139 1617 aa17.67■□□□□ 0.42
CLINT1-201ENST00000411809 PNISRQ8TF01 805 aaKnown RBP17.66■□□□□ 0.42
CLINT1-201ENST00000411809 BRD4O60885 1362 aaPredicted RBP17.65■□□□□ 0.42
CLINT1-201ENST00000411809 SYNMO15061 1565 aa17.65■□□□□ 0.42
CLINT1-201ENST00000411809 ZNF518AQ6AHZ1 1483 aa17.65■□□□□ 0.42
CLINT1-201ENST00000411809 RNF123Q5XPI4 1314 aa17.64■□□□□ 0.41
CLINT1-201ENST00000411809 HECW2Q9P2P5 1572 aa17.64■□□□□ 0.41
CLINT1-201ENST00000411809 ERICH6BQ5W0A0 696 aa17.63■□□□□ 0.41
CLINT1-201ENST00000411809 ZC3H13Q5T200 1668 aaKnown RBP17.63■□□□□ 0.41
CLINT1-201ENST00000411809 ADGRB3O60242 1522 aa17.63■□□□□ 0.41
CLINT1-201ENST00000411809 MLH3Q9UHC1 1453 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms