RNA–Protein interactions for RNA: ENST00000411796.6

CCDC196-203, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,132 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-203ENST00000411796 G3V3G9 751 aa13.55□□□□□ -0.24
CCDC196-203ENST00000411796 CADPS2Q86UW7 1296 aa13.55□□□□□ -0.24
CCDC196-203ENST00000411796 KDM4FA0A1W2PPD8 638 aa13.53□□□□□ -0.24
CCDC196-203ENST00000411796 SHROOM2Q13796 1616 aa13.52□□□□□ -0.25
CCDC196-203ENST00000411796 CTTNBP2Q8WZ74 1663 aa13.5□□□□□ -0.25
CCDC196-203ENST00000411796 CLIP1P30622 1438 aa13.5□□□□□ -0.25
CCDC196-203ENST00000411796 FMN1Q68DA7 1419 aa13.49□□□□□ -0.25
CCDC196-203ENST00000411796 PRG4Q92954 1404 aaPredicted RBP13.49□□□□□ -0.25
CCDC196-203ENST00000411796 CEP162Q5TB80 1403 aa13.48□□□□□ -0.25
CCDC196-203ENST00000411796 LHX8Q68G74 356 aa13.47□□□□□ -0.25
CCDC196-203ENST00000411796 DISP1Q96F81 1524 aa13.47□□□□□ -0.25
CCDC196-203ENST00000411796 SAMD9Q5K651 1589 aa13.45□□□□□ -0.26
CCDC196-203ENST00000411796 ARHGAP35Q9NRY4 1499 aa13.45□□□□□ -0.26
CCDC196-203ENST00000411796 TMEM92Q6UXU6 159 aa13.45□□□□□ -0.26
CCDC196-203ENST00000411796 C3orf67Q6ZVT6 689 aa13.45□□□□□ -0.26
CCDC196-203ENST00000411796 PTPRGP23470 1445 aa13.45□□□□□ -0.26
CCDC196-203ENST00000411796 NCKAP5LQ9HCH0 1330 aa13.43□□□□□ -0.26
CCDC196-203ENST00000411796 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.43□□□□□ -0.26
CCDC196-203ENST00000411796 KDM2AQ9Y2K7 1162 aa13.42□□□□□ -0.26
CCDC196-203ENST00000411796 KIF13AQ9H1H9 1805 aa13.41□□□□□ -0.26
CCDC196-203ENST00000411796 MAMSTRQ6ZN01 415 aa13.41□□□□□ -0.26
CCDC196-203ENST00000411796 PDE4AP27815 886 aa13.4□□□□□ -0.26
CCDC196-203ENST00000411796 CRISPLD2Q9H0B8 497 aa13.4□□□□□ -0.26
CCDC196-203ENST00000411796 KIAA0556O60303 1618 aa13.39□□□□□ -0.27
CCDC196-203ENST00000411796 OTUD5Q96G74 571 aa13.39□□□□□ -0.27
CCDC196-203ENST00000411796 SCUBE2Q9NQ36 999 aa13.39□□□□□ -0.27
CCDC196-203ENST00000411796 UHRF1BP1LA0JNW5 1464 aa13.39□□□□□ -0.27
CCDC196-203ENST00000411796 C2orf72A6NCS6 295 aa13.38□□□□□ -0.27
CCDC196-203ENST00000411796 KIF3CO14782 793 aa13.38□□□□□ -0.27
CCDC196-203ENST00000411796 VSIG10Q8N0Z9 540 aa13.38□□□□□ -0.27
CCDC196-203ENST00000411796 GPHNQ9NQX3 736 aaPredicted RBP13.38□□□□□ -0.27
CCDC196-203ENST00000411796 VPS8Q8N3P4 1428 aa13.38□□□□□ -0.27
CCDC196-203ENST00000411796 CASKIN1Q8WXD9 1431 aa13.38□□□□□ -0.27
CCDC196-203ENST00000411796 LARP6Q9BRS8 491 aaKnown RBP13.37□□□□□ -0.27
CCDC196-203ENST00000411796 CDK11AQ9UQ88 783 aaPredicted RBP13.37□□□□□ -0.27
CCDC196-203ENST00000411796 MAP3K1Q13233 1512 aa13.37□□□□□ -0.27
CCDC196-203ENST00000411796 TMC2Q8TDI7 906 aa13.36□□□□□ -0.27
CCDC196-203ENST00000411796 UACAQ9BZF9 1416 aa13.36□□□□□ -0.27
CCDC196-203ENST00000411796 SLAIN1Q8ND83 568 aa13.34□□□□□ -0.27
CCDC196-203ENST00000411796 P3H3Q8IVL6 736 aa13.33□□□□□ -0.28
CCDC196-203ENST00000411796 FHOD3Q2V2M9 1422 aa13.31□□□□□ -0.28
CCDC196-203ENST00000411796 FYCO1Q9BQS8 1478 aa13.31□□□□□ -0.28
CCDC196-203ENST00000411796 DSG2Q14126 1118 aa13.31□□□□□ -0.28
CCDC196-203ENST00000411796 FBXO41Q8TF61 875 aa13.31□□□□□ -0.28
CCDC196-203ENST00000411796 MFSD10Q14728 455 aa13.3□□□□□ -0.28
CCDC196-203ENST00000411796 CCDC18Q5T9S5 1454 aa13.29□□□□□ -0.28
CCDC196-203ENST00000411796 ABCA8O94911 1581 aa13.29□□□□□ -0.28
CCDC196-203ENST00000411796 RANGAP1P46060 587 aaPredicted RBP13.29□□□□□ -0.28
CCDC196-203ENST00000411796 FOXK1P85037 733 aa13.29□□□□□ -0.28
CCDC196-203ENST00000411796 DDX27Q96GQ7 796 aaKnown RBP13.29□□□□□ -0.28
CCDC196-203ENST00000411796 WDR70Q9NW82 654 aa13.28□□□□□ -0.28
CCDC196-203ENST00000411796 KDM5BQ9UGL1 1544 aa13.28□□□□□ -0.28
CCDC196-203ENST00000411796 ERCC6L2Q5T890 1561 aa13.28□□□□□ -0.28
CCDC196-203ENST00000411796 PLEKHD1A6NEE1 506 aa13.27□□□□□ -0.29
CCDC196-203ENST00000411796 PPP1R15BQ5SWA1 713 aa13.26□□□□□ -0.29
CCDC196-203ENST00000411796 PLPP6Q8IY26 295 aa13.26□□□□□ -0.29
CCDC196-203ENST00000411796 ABCC2Q92887 1545 aa13.26□□□□□ -0.29
CCDC196-203ENST00000411796 HECW2Q9P2P5 1572 aa13.25□□□□□ -0.29
CCDC196-203ENST00000411796 FAM69CQ0P6D2 419 aa13.24□□□□□ -0.29
CCDC196-203ENST00000411796 ATP10BO94823 1461 aa13.23□□□□□ -0.29
CCDC196-203ENST00000411796 PLB1Q6P1J6 1458 aa13.23□□□□□ -0.29
CCDC196-203ENST00000411796 RAPGEF6Q8TEU7 1601 aa13.23□□□□□ -0.29
CCDC196-203ENST00000411796 EPRSP07814 1512 aaKnown RBP13.23□□□□□ -0.29
CCDC196-203ENST00000411796 NUP153P49790 1475 aaKnown RBP13.22□□□□□ -0.29
CCDC196-203ENST00000411796 KDM6BO15054 1643 aa13.21□□□□□ -0.29
CCDC196-203ENST00000411796 HECW1Q76N89 1606 aa13.21□□□□□ -0.29
CCDC196-203ENST00000411796 LMTK3Q96Q04 1460 aa13.2□□□□□ -0.3
CCDC196-203ENST00000411796 E2F4Q16254 413 aa13.18□□□□□ -0.3
CCDC196-203ENST00000411796 ATP1B4Q9UN42 357 aaPredicted RBP13.17□□□□□ -0.3
CCDC196-203ENST00000411796 ABCC10Q5T3U5 1492 aa13.16□□□□□ -0.3
CCDC196-203ENST00000411796 TSPOAP1O95153 1857 aa13.16□□□□□ -0.3
CCDC196-203ENST00000411796 CAMK2BQ13554 666 aa13.16□□□□□ -0.3
CCDC196-203ENST00000411796 MAPKBP1O60336 1514 aa13.15□□□□□ -0.3
CCDC196-203ENST00000411796 ADGRL1O94910 1474 aa13.15□□□□□ -0.3
CCDC196-203ENST00000411796 TROQ12816 1431 aaPredicted RBP13.14□□□□□ -0.31
CCDC196-203ENST00000411796 SOCS7O14512 581 aa13.14□□□□□ -0.31
CCDC196-203ENST00000411796 HOXB3P14651 431 aaPredicted RBP13.14□□□□□ -0.31
CCDC196-203ENST00000411796 MTUS2Q5JR59 1369 aa13.14□□□□□ -0.31
CCDC196-203ENST00000411796 LRRC9Q6ZRR7 1453 aa13.14□□□□□ -0.31
CCDC196-203ENST00000411796 EMILIN3Q9NT22 766 aa13.13□□□□□ -0.31
CCDC196-203ENST00000411796 ADCY10Q96PN6 1610 aa13.13□□□□□ -0.31
CCDC196-203ENST00000411796 TIAM1Q13009 1591 aa13.12□□□□□ -0.31
CCDC196-203ENST00000411796 ILDR2Q71H61 639 aa13.12□□□□□ -0.31
CCDC196-203ENST00000411796 TTBK1Q5TCY1 1321 aaPredicted RBP13.12□□□□□ -0.31
CCDC196-203ENST00000411796 PCF11O94913 1555 aaKnown RBP13.11□□□□□ -0.31
CCDC196-203ENST00000411796 PHLDB1Q86UU1 1377 aa13.11□□□□□ -0.31
CCDC196-203ENST00000411796 RSPH4AQ5TD94 716 aa13.11□□□□□ -0.31
CCDC196-203ENST00000411796 KCNV2Q8TDN2 545 aa13.11□□□□□ -0.31
CCDC196-203ENST00000411796 SLC34A2O95436 690 aa13.1□□□□□ -0.31
CCDC196-203ENST00000411796 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.09□□□□□ -0.31
CCDC196-203ENST00000411796 KANK4Q5T7N3 995 aaPredicted RBP13.09□□□□□ -0.31
CCDC196-203ENST00000411796 DIP2BQ9P265 1576 aa13.09□□□□□ -0.31
CCDC196-203ENST00000411796 WDR7Q9Y4E6 1490 aa13.09□□□□□ -0.31
CCDC196-203ENST00000411796 ASXL2Q76L83 1435 aa13.08□□□□□ -0.32
CCDC196-203ENST00000411796 MIA2Q96PC5 1412 aa13.08□□□□□ -0.32
CCDC196-203ENST00000411796 SNPHO15079 494 aa13.08□□□□□ -0.32
CCDC196-203ENST00000411796 OXER1Q8TDS5 423 aa13.08□□□□□ -0.32
CCDC196-203ENST00000411796 UPF1Q92900 1129 aaKnown RBP eCLIP13.08□□□□□ -0.32
CCDC196-203ENST00000411796 EHBP1L1Q8N3D4 1523 aa13.08□□□□□ -0.32
CCDC196-203ENST00000411796 DOK7Q18PE1 504 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms