RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 PCDH10Q9P2E7 1040 aa11.1□□□□□ -0.63
LINC00396-201ENST00000411690 CTTNBP2Q8WZ74 1663 aa11.09□□□□□ -0.63
LINC00396-201ENST00000411690 UBAP1LF5GYI3 381 aa11.09□□□□□ -0.63
LINC00396-201ENST00000411690 FAM163AQ96GL9 167 aaPredicted RBP11.09□□□□□ -0.63
LINC00396-201ENST00000411690 MAGI2Q86UL8 1455 aa11.08□□□□□ -0.64
LINC00396-201ENST00000411690 P3H3Q8IVL6 736 aa11.08□□□□□ -0.64
LINC00396-201ENST00000411690 PROM2Q8N271 834 aa11.08□□□□□ -0.64
LINC00396-201ENST00000411690 SCUBE2Q9NQ36 999 aa11.07□□□□□ -0.64
LINC00396-201ENST00000411690 ZMYM4Q5VZL5 1548 aa11.07□□□□□ -0.64
LINC00396-201ENST00000411690 ARHGEF12Q9NZN5 1544 aa11.07□□□□□ -0.64
LINC00396-201ENST00000411690 CFAP74Q9C0B2 1584 aa11.04□□□□□ -0.64
LINC00396-201ENST00000411690 SETD1BQ9UPS6 1966 aaKnown RBP11.03□□□□□ -0.64
LINC00396-201ENST00000411690 HECW1Q76N89 1606 aa11.03□□□□□ -0.64
LINC00396-201ENST00000411690 PLEKHD1A6NEE1 506 aa11.03□□□□□ -0.64
LINC00396-201ENST00000411690 MAP3K13O43283 966 aa11.03□□□□□ -0.64
LINC00396-201ENST00000411690 ATP10AO60312 1499 aa11.03□□□□□ -0.64
LINC00396-201ENST00000411690 C9orf84Q5VXU9 1444 aa11.01□□□□□ -0.65
LINC00396-201ENST00000411690 RASEFQ8IZ41 740 aa11.01□□□□□ -0.65
LINC00396-201ENST00000411690 COLQQ9Y215 455 aaPredicted RBP11.01□□□□□ -0.65
LINC00396-201ENST00000411690 MED1Q15648 1581 aaPredicted RBP11.01□□□□□ -0.65
LINC00396-201ENST00000411690 RAPGEF6Q8TEU7 1601 aa11□□□□□ -0.65
LINC00396-201ENST00000411690 SCAPERQ9BY12 1400 aa11□□□□□ -0.65
LINC00396-201ENST00000411690 HSPA1LP34931 641 aa10.99□□□□□ -0.65
LINC00396-201ENST00000411690 TIE1P35590 1138 aa10.99□□□□□ -0.65
LINC00396-201ENST00000411690 ZNF335Q9H4Z2 1342 aaPredicted RBP10.99□□□□□ -0.65
LINC00396-201ENST00000411690 NCOA1Q15788 1441 aa10.99□□□□□ -0.65
LINC00396-201ENST00000411690 ESF1Q9H501 851 aaKnown RBP10.98□□□□□ -0.65
LINC00396-201ENST00000411690 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.98□□□□□ -0.65
LINC00396-201ENST00000411690 TTLL13PA6NNM8 815 aa10.97□□□□□ -0.65
LINC00396-201ENST00000411690 TRAPPC8Q9Y2L5 1435 aa10.97□□□□□ -0.65
LINC00396-201ENST00000411690 NUP153P49790 1475 aaKnown RBP10.97□□□□□ -0.65
LINC00396-201ENST00000411690 PIP4K2BP78356 416 aa10.96□□□□□ -0.65
LINC00396-201ENST00000411690 NCKAP5LQ9HCH0 1330 aa10.95□□□□□ -0.66
LINC00396-201ENST00000411690 MYT1LQ9UL68 1186 aa10.95□□□□□ -0.66
LINC00396-201ENST00000411690 C3P01024 1663 aa10.95□□□□□ -0.66
LINC00396-201ENST00000411690 CAMSAP1Q5T5Y3 1602 aa10.93□□□□□ -0.66
LINC00396-201ENST00000411690 PLCH2O75038 1416 aa10.92□□□□□ -0.66
LINC00396-201ENST00000411690 TOM1O60784 492 aa10.92□□□□□ -0.66
LINC00396-201ENST00000411690 PRXQ9BXM0 1461 aa10.92□□□□□ -0.66
LINC00396-201ENST00000411690 SEC24BO95487 1268 aa10.91□□□□□ -0.66
LINC00396-201ENST00000411690 PKD2Q13563 968 aa10.91□□□□□ -0.66
LINC00396-201ENST00000411690 EFCAB2Q5VUJ9 269 aa10.91□□□□□ -0.66
LINC00396-201ENST00000411690 MIER1Q8N108 512 aa10.9□□□□□ -0.66
LINC00396-201ENST00000411690 SAMD9Q5K651 1589 aa10.9□□□□□ -0.67
LINC00396-201ENST00000411690 AFAP1Q8N556 730 aa10.89□□□□□ -0.67
LINC00396-201ENST00000411690 TRIM35Q9UPQ4 493 aa10.89□□□□□ -0.67
LINC00396-201ENST00000411690 ZNF518AQ6AHZ1 1483 aa10.88□□□□□ -0.67
LINC00396-201ENST00000411690 CDAN1Q8IWY9 1227 aa10.88□□□□□ -0.67
LINC00396-201ENST00000411690 CNTLNQ9NXG0 1405 aa10.87□□□□□ -0.67
LINC00396-201ENST00000411690 RANGAP1P46060 587 aaPredicted RBP10.87□□□□□ -0.67
LINC00396-201ENST00000411690 NPATQ14207 1427 aa10.86□□□□□ -0.67
LINC00396-201ENST00000411690 AGLP35573 1532 aa10.86□□□□□ -0.67
LINC00396-201ENST00000411690 REREQ9P2R6 1566 aa10.86□□□□□ -0.67
LINC00396-201ENST00000411690 DIP2CQ9Y2E4 1556 aa10.86□□□□□ -0.67
LINC00396-201ENST00000411690 PLA2R1Q13018 1463 aa10.85□□□□□ -0.67
LINC00396-201ENST00000411690 PCDHB13Q9Y5F0 798 aa10.84□□□□□ -0.67
LINC00396-201ENST00000411690 KDM5CP41229 1560 aa10.84□□□□□ -0.67
LINC00396-201ENST00000411690 TCOF1Q13428 1488 aaKnown RBP10.83□□□□□ -0.68
LINC00396-201ENST00000411690 ZMYM3Q14202 1370 aa10.83□□□□□ -0.68
LINC00396-201ENST00000411690 PLEKHG5O94827 1062 aa10.83□□□□□ -0.68
LINC00396-201ENST00000411690 IER5LQ5T953 404 aa10.83□□□□□ -0.68
LINC00396-201ENST00000411690 RGS17Q9UGC6 210 aaPredicted RBP10.82□□□□□ -0.68
LINC00396-201ENST00000411690 MLH3Q9UHC1 1453 aa10.81□□□□□ -0.68
LINC00396-201ENST00000411690 MYO5CQ9NQX4 1742 aa10.81□□□□□ -0.68
LINC00396-201ENST00000411690 CPS1P31327 1500 aa10.81□□□□□ -0.68
LINC00396-201ENST00000411690 CDK13Q14004 1512 aaKnown RBP10.81□□□□□ -0.68
LINC00396-201ENST00000411690 ST18O60284 1047 aa10.81□□□□□ -0.68
LINC00396-201ENST00000411690 IFNL1Q8IU54 200 aa10.81□□□□□ -0.68
LINC00396-201ENST00000411690 PTPRKQ15262 1439 aa10.81□□□□□ -0.68
LINC00396-201ENST00000411690 ABCA6Q8N139 1617 aa10.8□□□□□ -0.68
LINC00396-201ENST00000411690 SLAIN1Q8ND83 568 aa10.8□□□□□ -0.68
LINC00396-201ENST00000411690 SUPT6HQ7KZ85 1726 aaKnown RBP10.8□□□□□ -0.68
LINC00396-201ENST00000411690 ARHGAP5Q13017 1502 aa10.79□□□□□ -0.68
LINC00396-201ENST00000411690 SGIP1Q9BQI5 828 aa10.79□□□□□ -0.68
LINC00396-201ENST00000411690 MROH2AA6NES4 1674 aa10.79□□□□□ -0.68
LINC00396-201ENST00000411690 CEP170BQ9Y4F5 1589 aaPredicted RBP10.78□□□□□ -0.68
LINC00396-201ENST00000411690 NUBP1P53384 320 aa10.78□□□□□ -0.68
LINC00396-201ENST00000411690 SHANK2Q9UPX8 1470 aa10.78□□□□□ -0.68
LINC00396-201ENST00000411690 ZNF142P52746 1687 aaPredicted RBP10.78□□□□□ -0.68
LINC00396-201ENST00000411690 MYO3AQ8NEV4 1616 aa10.77□□□□□ -0.68
LINC00396-201ENST00000411690 ATP1B4Q9UN42 357 aaPredicted RBP10.77□□□□□ -0.69
LINC00396-201ENST00000411690 CDK11AQ9UQ88 783 aaPredicted RBP10.77□□□□□ -0.69
LINC00396-201ENST00000411690 PLCD3Q8N3E9 789 aa10.76□□□□□ -0.69
LINC00396-201ENST00000411690 TMEM106CQ9BVX2 250 aa10.75□□□□□ -0.69
LINC00396-201ENST00000411690 POTEAQ6S8J7 498 aa10.74□□□□□ -0.69
LINC00396-201ENST00000411690 KIF14Q15058 1648 aa10.73□□□□□ -0.69
LINC00396-201ENST00000411690 ALKQ9UM73 1620 aa10.73□□□□□ -0.69
LINC00396-201ENST00000411690 KIDINS220Q9ULH0 1771 aa10.72□□□□□ -0.69
LINC00396-201ENST00000411690 IRX5P78411 483 aaPredicted RBP10.72□□□□□ -0.69
LINC00396-201ENST00000411690 A2ML1A8K2U0 1454 aa10.72□□□□□ -0.69
LINC00396-201ENST00000411690 CLTCQ00610 1675 aaKnown RBP10.72□□□□□ -0.69
LINC00396-201ENST00000411690 PLCG2P16885 1265 aa10.71□□□□□ -0.69
LINC00396-201ENST00000411690 DNMT1P26358 1616 aaKnown RBP10.7□□□□□ -0.7
LINC00396-201ENST00000411690 CLIP1P30622 1438 aa10.7□□□□□ -0.7
LINC00396-201ENST00000411690 TROQ12816 1431 aaPredicted RBP10.7□□□□□ -0.7
LINC00396-201ENST00000411690 GGT6Q6P531 493 aa10.7□□□□□ -0.7
LINC00396-201ENST00000411690 ANKLE2Q86XL3 938 aa10.7□□□□□ -0.7
LINC00396-201ENST00000411690 ABCC1P33527 1531 aa10.69□□□□□ -0.7
LINC00396-201ENST00000411690 POLR1AO95602 1720 aaPredicted RBP10.69□□□□□ -0.7
LINC00396-201ENST00000411690 CDC42BPBQ9Y5S2 1711 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms