RNA–Protein interactions for RNA: ENST00000411651.6

SUMO3-204, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 1,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-204ENST00000411651 DEPDC5O75140 1603 aa28.19■■■□□ 2.1
SUMO3-204ENST00000411651 PLA2R1Q13018 1463 aa28.19■■■□□ 2.1
SUMO3-204ENST00000411651 ARID4BQ4LE39 1312 aaPredicted RBP28.18■■■□□ 2.1
SUMO3-204ENST00000411651 ATP7AQ04656 1500 aa28.18■■■□□ 2.1
SUMO3-204ENST00000411651 ADGRL1O94910 1474 aa28.16■■■□□ 2.1
SUMO3-204ENST00000411651 EIF2AK4Q9P2K8 1649 aaKnown RBP28.16■■■□□ 2.1
SUMO3-204ENST00000411651 CFAP74Q9C0B2 1584 aa28.15■■■□□ 2.1
SUMO3-204ENST00000411651 USP47Q96K76 1375 aa28.15■■■□□ 2.1
SUMO3-204ENST00000411651 NPM1P06748 294 aaKnown RBP eCLIP28.13■■■□□ 2.09
SUMO3-204ENST00000411651 SCAPERQ9BY12 1400 aa28.1■■■□□ 2.09
SUMO3-204ENST00000411651 VWDEQ8N2E2 1590 aa28.1■■■□□ 2.09
SUMO3-204ENST00000411651 AFAP1Q8N556 730 aa28.09■■■□□ 2.09
SUMO3-204ENST00000411651 KIF7Q2M1P5 1343 aa28.09■■■□□ 2.09
SUMO3-204ENST00000411651 C11orf95C9JLR9 678 aaPredicted RBP28.08■■■□□ 2.09
SUMO3-204ENST00000411651 PRAG1Q86YV5 1406 aa28.07■■■□□ 2.08
SUMO3-204ENST00000411651 LAMC1P11047 1609 aa28.07■■■□□ 2.08
SUMO3-204ENST00000411651 ZNF518AQ6AHZ1 1483 aa28.06■■■□□ 2.08
SUMO3-204ENST00000411651 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.06■■■□□ 2.08
SUMO3-204ENST00000411651 TET3O43151 1660 aa28.05■■■□□ 2.08
SUMO3-204ENST00000411651 TRPM1Q7Z4N2 1603 aa28.05■■■□□ 2.08
SUMO3-204ENST00000411651 PRDM15P57071 1507 aaPredicted RBP28.04■■■□□ 2.08
SUMO3-204ENST00000411651 TRPM2O94759 1503 aa28.03■■■□□ 2.08
SUMO3-204ENST00000411651 A2MP01023 1474 aa28.03■■■□□ 2.08
SUMO3-204ENST00000411651 DHX29Q7Z478 1369 aaKnown RBP28.03■■■□□ 2.08
SUMO3-204ENST00000411651 DCAF11Q8TEB1 546 aa28.03■■■□□ 2.08
SUMO3-204ENST00000411651 E9PCH4 1651 aa28.03■■■□□ 2.08
SUMO3-204ENST00000411651 GPRASP1Q5JY77 1395 aa28.02■■■□□ 2.08
SUMO3-204ENST00000411651 BCORL1Q5H9F3 1711 aa28.02■■■□□ 2.08
SUMO3-204ENST00000411651 PTPRTO14522 1441 aa28.02■■■□□ 2.08
SUMO3-204ENST00000411651 ROCK2O75116 1388 aaKnown RBP28.02■■■□□ 2.08
SUMO3-204ENST00000411651 NEURL4Q96JN8 1562 aa28■■■□□ 2.07
SUMO3-204ENST00000411651 ZNF326Q5BKZ1 582 aaKnown RBP28■■■□□ 2.07
SUMO3-204ENST00000411651 CARD11Q9BXL7 1154 aa28■■■□□ 2.07
SUMO3-204ENST00000411651 KANK1Q14678 1352 aa27.99■■■□□ 2.07
SUMO3-204ENST00000411651 KIDINS220Q9ULH0 1771 aa27.98■■■□□ 2.07
SUMO3-204ENST00000411651 CD109Q6YHK3 1445 aa27.98■■■□□ 2.07
SUMO3-204ENST00000411651 SPHKAPQ2M3C7 1700 aa27.97■■■□□ 2.07
SUMO3-204ENST00000411651 STAC3Q96MF2 364 aa27.96■■■□□ 2.07
SUMO3-204ENST00000411651 MROH1Q8NDA8 1641 aa27.95■■■□□ 2.06
SUMO3-204ENST00000411651 POGZQ7Z3K3 1410 aa27.95■■■□□ 2.06
SUMO3-204ENST00000411651 MLH3Q9UHC1 1453 aa27.95■■■□□ 2.06
SUMO3-204ENST00000411651 NEO1Q92859 1461 aa27.94■■■□□ 2.06
SUMO3-204ENST00000411651 PRKRIP1Q9H875 184 aaPredicted RBP27.93■■■□□ 2.06
SUMO3-204ENST00000411651 CEP152O94986 1710 aa27.93■■■□□ 2.06
SUMO3-204ENST00000411651 LMTK2Q8IWU2 1503 aa27.93■■■□□ 2.06
SUMO3-204ENST00000411651 KDM2AQ9Y2K7 1162 aa27.92■■■□□ 2.06
SUMO3-204ENST00000411651 RNF17Q9BXT8 1623 aaKnown RBP27.92■■■□□ 2.06
SUMO3-204ENST00000411651 HECW2Q9P2P5 1572 aa27.88■■■□□ 2.05
SUMO3-204ENST00000411651 EFCAB6Q5THR3 1501 aa27.85■■■□□ 2.05
SUMO3-204ENST00000411651 CLTCL1P53675 1640 aa27.84■■■□□ 2.05
SUMO3-204ENST00000411651 KIF3BO15066 747 aa27.83■■■□□ 2.05
SUMO3-204ENST00000411651 ST20-MTHFSA0A0A6YYL1 179 aa27.82■■■□□ 2.04
SUMO3-204ENST00000411651 RGL3Q3MIN7 710 aa27.82■■■□□ 2.04
SUMO3-204ENST00000411651 GLI2P10070 1586 aa27.82■■■□□ 2.04
SUMO3-204ENST00000411651 MADDQ8WXG6 1647 aa27.81■■■□□ 2.04
SUMO3-204ENST00000411651 MAP3K4Q9Y6R4 1608 aa27.79■■■□□ 2.04
SUMO3-204ENST00000411651 FRMPD1Q5SYB0 1578 aa27.78■■■□□ 2.04
SUMO3-204ENST00000411651 KTN1Q86UP2 1357 aaKnown RBP27.78■■■□□ 2.04
SUMO3-204ENST00000411651 MYT1LQ9UL68 1186 aa27.77■■■□□ 2.04
SUMO3-204ENST00000411651 KIAA1210Q9ULL0 1709 aa27.75■■■□□ 2.03
SUMO3-204ENST00000411651 COL17A1Q9UMD9 1497 aaPredicted RBP27.74■■■□□ 2.03
SUMO3-204ENST00000411651 PPRC1Q5VV67 1664 aaKnown RBP27.74■■■□□ 2.03
SUMO3-204ENST00000411651 ABCA6Q8N139 1617 aa27.72■■■□□ 2.03
SUMO3-204ENST00000411651 NBPF1Q3BBV0 1214 aa27.71■■■□□ 2.03
SUMO3-204ENST00000411651 MYOM2P54296 1465 aa27.71■■■□□ 2.03
SUMO3-204ENST00000411651 IQGAP1P46940 1657 aa27.69■■■□□ 2.02
SUMO3-204ENST00000411651 RICTORQ6R327 1708 aa27.68■■■□□ 2.02
SUMO3-204ENST00000411651 KIF1BO60333 1816 aa27.68■■■□□ 2.02
SUMO3-204ENST00000411651 MRS2Q9HD23 443 aa27.67■■■□□ 2.02
SUMO3-204ENST00000411651 SUPT16HQ9Y5B9 1047 aaKnown RBP27.67■■■□□ 2.02
SUMO3-204ENST00000411651 RIMBP3CA6NJZ7 1639 aa27.66■■■□□ 2.02
SUMO3-204ENST00000411651 RIMBP3BA6NNM3 1639 aa27.66■■■□□ 2.02
SUMO3-204ENST00000411651 RIMBP3Q9UFD9 1639 aa27.66■■■□□ 2.02
SUMO3-204ENST00000411651 TESK2Q96S53 571 aa27.66■■■□□ 2.02
SUMO3-204ENST00000411651 DIP2CQ9Y2E4 1556 aa27.65■■■□□ 2.02
SUMO3-204ENST00000411651 IFT172Q9UG01 1749 aa27.64■■■□□ 2.01
SUMO3-204ENST00000411651 HNRNPUQ00839 825 aaKnown RBP eCLIP27.63■■■□□ 2.01
SUMO3-204ENST00000411651 SCAF11Q99590 1463 aaKnown RBP27.62■■■□□ 2.01
SUMO3-204ENST00000411651 ABCC3O15438 1527 aa27.62■■■□□ 2.01
SUMO3-204ENST00000411651 CCDC184Q52MB2 194 aa27.61■■■□□ 2.01
SUMO3-204ENST00000411651 ADGRB3O60242 1522 aa27.61■■■□□ 2.01
SUMO3-204ENST00000411651 WASHC2CQ9Y4E1 1318 aa27.61■■■□□ 2.01
SUMO3-204ENST00000411651 POLR3GLQ9BT43 218 aa27.6■■■□□ 2.01
SUMO3-204ENST00000411651 NRXN1Q9ULB1 1477 aa27.6■■■□□ 2.01
SUMO3-204ENST00000411651 ZC3H13Q5T200 1668 aaKnown RBP27.59■■■□□ 2.01
SUMO3-204ENST00000411651 RALBP1Q15311 655 aa27.59■■■□□ 2.01
SUMO3-204ENST00000411651 NPATQ14207 1427 aa27.59■■■□□ 2.01
SUMO3-204ENST00000411651 TMF1P82094 1093 aa27.59■■■□□ 2.01
SUMO3-204ENST00000411651 ZMYM4Q5VZL5 1548 aa27.58■■■□□ 2.01
SUMO3-204ENST00000411651 DIP2BQ9P265 1576 aa27.56■■■□□ 2
SUMO3-204ENST00000411651 ZBED9Q6R2W3 1325 aa27.55■■■□□ 2
SUMO3-204ENST00000411651 EIF3AQ14152 1382 aaKnown RBP27.55■■■□□ 2
SUMO3-204ENST00000411651 ARHGAP31Q2M1Z3 1444 aa27.55■■■□□ 2
SUMO3-204ENST00000411651 UGGT1Q9NYU2 1555 aa27.55■■■□□ 2
SUMO3-204ENST00000411651 CAMSAP1Q5T5Y3 1602 aa27.55■■■□□ 2
SUMO3-204ENST00000411651 DISP3Q9P2K9 1392 aa27.55■■■□□ 2
SUMO3-204ENST00000411651 SLC24A1O60721 1099 aa27.54■■■□□ 2
SUMO3-204ENST00000411651 BRD4O60885 1362 aaPredicted RBP27.53■■■□□ 2
SUMO3-204ENST00000411651 MROH2AA6NES4 1674 aa27.53■■■□□ 2
SUMO3-204ENST00000411651 CYB5RLQ6IPT4 315 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms