RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 NBR1Q14596 966 aa9.1□□□□□ -0.95
RNU4-55P-201ENST00000410731 MMRN1Q13201 1228 aa9.09□□□□□ -0.95
RNU4-55P-201ENST00000410731 ADGRD1Q6QNK2 874 aa9.09□□□□□ -0.95
RNU4-55P-201ENST00000410731 PPP1R3GB7ZBB8 358 aa9.08□□□□□ -0.96
RNU4-55P-201ENST00000410731 EN1Q05925 392 aaPredicted RBP9.08□□□□□ -0.96
RNU4-55P-201ENST00000410731 SLC4A5Q9BY07 1137 aa9.07□□□□□ -0.96
RNU4-55P-201ENST00000410731 GRXCR2A6NFK2 248 aa9.06□□□□□ -0.96
RNU4-55P-201ENST00000410731 C6orf132Q5T0Z8 1188 aa9.05□□□□□ -0.96
RNU4-55P-201ENST00000410731 RBM33Q96EV2 1170 aaKnown RBP9.05□□□□□ -0.96
RNU4-55P-201ENST00000410731 ZBED2Q9BTP6 218 aa9.05□□□□□ -0.96
RNU4-55P-201ENST00000410731 MAP3K7O43318 606 aa9.04□□□□□ -0.96
RNU4-55P-201ENST00000410731 HRO43593 1189 aa9.04□□□□□ -0.96
RNU4-55P-201ENST00000410731 OSBPP22059 807 aa9.04□□□□□ -0.96
RNU4-55P-201ENST00000410731 VPS9D1Q9Y2B5 631 aa9.04□□□□□ -0.96
RNU4-55P-201ENST00000410731 COL9A1P20849 921 aa9.03□□□□□ -0.96
RNU4-55P-201ENST00000410731 PRIM1P49642 420 aaKnown RBP9.03□□□□□ -0.96
RNU4-55P-201ENST00000410731 MYT1LQ9UL68 1186 aa9.03□□□□□ -0.96
RNU4-55P-201ENST00000410731 MLLT3P42568 568 aaPredicted RBP9.02□□□□□ -0.97
RNU4-55P-201ENST00000410731 TSR1Q2NL82 804 aaKnown RBP9.01□□□□□ -0.97
RNU4-55P-201ENST00000410731 RNF166Q96A37 237 aaPredicted RBP9□□□□□ -0.97
RNU4-55P-201ENST00000410731 SEMA3EO15041 775 aa8.99□□□□□ -0.97
RNU4-55P-201ENST00000410731 BHMG1C9JSJ3 638 aaPredicted RBP8.97□□□□□ -0.97
RNU4-55P-201ENST00000410731 PROX2Q3B8N5 592 aa8.97□□□□□ -0.97
RNU4-55P-201ENST00000410731 CERKQ8TCT0 537 aa8.97□□□□□ -0.97
RNU4-55P-201ENST00000410731 TESPA1A2RU30 521 aaPredicted RBP8.96□□□□□ -0.98
RNU4-55P-201ENST00000410731 ONECUT3O60422 494 aaPredicted RBP8.96□□□□□ -0.98
RNU4-55P-201ENST00000410731 NBPF3Q9H094 633 aa8.96□□□□□ -0.98
RNU4-55P-201ENST00000410731 CDHR5Q9HBB8 845 aa8.96□□□□□ -0.98
RNU4-55P-201ENST00000410731 RABGEF1Q9UJ41 708 aa8.96□□□□□ -0.98
RNU4-55P-201ENST00000410731 TRIM6-TRIM34B2RNG4 842 aa8.95□□□□□ -0.98
RNU4-55P-201ENST00000410731 STAC3Q96MF2 364 aa8.95□□□□□ -0.98
RNU4-55P-201ENST00000410731 PRSS12P56730 875 aa8.92□□□□□ -0.98
RNU4-55P-201ENST00000410731 MRPL50Q8N5N7 158 aaKnown RBP8.92□□□□□ -0.98
RNU4-55P-201ENST00000410731 RBM27Q9P2N5 1060 aaKnown RBP8.92□□□□□ -0.98
RNU4-55P-201ENST00000410731 SMYD5Q6GMV2 418 aa8.91□□□□□ -0.98
RNU4-55P-201ENST00000410731 CDCA7LQ96GN5 454 aa8.91□□□□□ -0.98
RNU4-55P-201ENST00000410731 KIAA1468Q9P260 1216 aa8.91□□□□□ -0.98
RNU4-55P-201ENST00000410731 TSKSQ9UJT2 592 aa8.91□□□□□ -0.98
RNU4-55P-201ENST00000410731 LAPTM4BQ86VI4 370 aa8.9□□□□□ -0.98
RNU4-55P-201ENST00000410731 NPDC1Q9NQX5 325 aaPredicted RBP8.9□□□□□ -0.98
RNU4-55P-201ENST00000410731 PACS2Q86VP3 889 aa8.88□□□□□ -0.99
RNU4-55P-201ENST00000410731 GOLGA8CPA6NN73 597 aa8.87□□□□□ -0.99
RNU4-55P-201ENST00000410731 PTGDRQ13258 359 aa8.87□□□□□ -0.99
RNU4-55P-201ENST00000410731 TTC13Q8NBP0 860 aa8.87□□□□□ -0.99
RNU4-55P-201ENST00000410731 KCTD12Q96CX2 325 aaKnown RBP8.87□□□□□ -0.99
RNU4-55P-201ENST00000410731 FAM198AQ9UFP1 575 aa8.87□□□□□ -0.99
RNU4-55P-201ENST00000410731 NUTM2FA1L443 756 aa8.86□□□□□ -0.99
RNU4-55P-201ENST00000410731 SEPT9Q9UHD8 586 aaPredicted RBP8.86□□□□□ -0.99
RNU4-55P-201ENST00000410731 NBPF26B4DH59 902 aa8.85□□□□□ -0.99
RNU4-55P-201ENST00000410731 FAM98CQ17RN3 349 aaKnown RBP8.85□□□□□ -0.99
RNU4-55P-201ENST00000410731 RBM26Q5T8P6 1007 aaKnown RBP8.85□□□□□ -0.99
RNU4-55P-201ENST00000410731 PADI6Q6TGC4 694 aa8.85□□□□□ -0.99
RNU4-55P-201ENST00000410731 WNT2BQ93097 391 aa8.85□□□□□ -0.99
RNU4-55P-201ENST00000410731 FCHSD2O94868 740 aa8.84□□□□□ -0.99
RNU4-55P-201ENST00000410731 HCSTQ9UBK5 93 aa8.84□□□□□ -0.99
RNU4-55P-201ENST00000410731 THSD4Q6ZMP0 1018 aa8.83□□□□□ -1
RNU4-55P-201ENST00000410731 ANKK1Q8NFD2 765 aa8.83□□□□□ -1
RNU4-55P-201ENST00000410731 ZFRQ96KR1 1074 aaKnown RBP8.83□□□□□ -1
RNU4-55P-201ENST00000410731 TULP1O00294 542 aaPredicted RBP8.82□□□□□ -1
RNU4-55P-201ENST00000410731 TATDN2Q93075 761 aa8.82□□□□□ -1
RNU4-55P-201ENST00000410731 C3orf80F5H4A9 247 aa8.81□□□□□ -1
RNU4-55P-201ENST00000410731 PNMA3Q9UL41 463 aa8.81□□□□□ -1
RNU4-55P-201ENST00000410731 SMAPO00193 183 aa8.8□□□□□ -1
RNU4-55P-201ENST00000410731 GPR37O15354 613 aa8.8□□□□□ -1
RNU4-55P-201ENST00000410731 NUDT18Q6ZVK8 323 aa8.8□□□□□ -1
RNU4-55P-201ENST00000410731 SOWAHBA6NEL2 793 aa8.79□□□□□ -1
RNU4-55P-201ENST00000410731 SLC24A1O60721 1099 aa8.79□□□□□ -1
RNU4-55P-201ENST00000410731 HIC1Q14526 733 aa8.79□□□□□ -1
RNU4-55P-201ENST00000410731 GPIHBP1Q8IV16 184 aa8.78□□□□□ -1
RNU4-55P-201ENST00000410731 BCAMP50895 628 aa8.77□□□□□ -1.01
RNU4-55P-201ENST00000410731 LRCH3Q96II8 777 aa8.77□□□□□ -1.01
RNU4-55P-201ENST00000410731 PTPN5P54829 565 aa8.76□□□□□ -1.01
RNU4-55P-201ENST00000410731 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.76□□□□□ -1.01
RNU4-55P-201ENST00000410731 ADGRG1Q9Y653 693 aa8.76□□□□□ -1.01
RNU4-55P-201ENST00000410731 GNPATO15228 680 aa8.75□□□□□ -1.01
RNU4-55P-201ENST00000410731 EYA1Q99502 592 aa8.75□□□□□ -1.01
RNU4-55P-201ENST00000410731 SAMD7Q7Z3H4 446 aa8.74□□□□□ -1.01
RNU4-55P-201ENST00000410731 RBM46Q8TBY0 533 aaKnown RBP8.73□□□□□ -1.01
RNU4-55P-201ENST00000410731 NYAP1Q6ZVC0 841 aa8.72□□□□□ -1.01
RNU4-55P-201ENST00000410731 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.72□□□□□ -1.01
RNU4-55P-201ENST00000410731 TSR3Q9UJK0 312 aaKnown RBP8.72□□□□□ -1.01
RNU4-55P-201ENST00000410731 HPS5Q9UPZ3 1129 aa8.72□□□□□ -1.01
RNU4-55P-201ENST00000410731 OATP04181 439 aa8.7□□□□□ -1.02
RNU4-55P-201ENST00000410731 FECHP22830 423 aa8.7□□□□□ -1.02
RNU4-55P-201ENST00000410731 DNAJB2P25686 324 aa8.7□□□□□ -1.02
RNU4-55P-201ENST00000410731 HDGFP51858 240 aaKnown RBP8.7□□□□□ -1.02
RNU4-55P-201ENST00000410731 FAM161AQ3B820 660 aa8.7□□□□□ -1.02
RNU4-55P-201ENST00000410731 LMOD2Q6P5Q4 547 aa8.7□□□□□ -1.02
RNU4-55P-201ENST00000410731 WBP1LQ9NX94 342 aa8.7□□□□□ -1.02
RNU4-55P-201ENST00000410731 SWT1Q5T5J6 900 aaKnown RBP8.69□□□□□ -1.02
RNU4-55P-201ENST00000410731 PXYLP1Q8TE99 480 aa8.69□□□□□ -1.02
RNU4-55P-201ENST00000410731 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.68□□□□□ -1.02
RNU4-55P-201ENST00000410731 TMEM134Q9H6X4 195 aa8.68□□□□□ -1.02
RNU4-55P-201ENST00000410731 RCCD1A6NED2 376 aa8.67□□□□□ -1.02
RNU4-55P-201ENST00000410731 PPP4CP60510 307 aa8.67□□□□□ -1.02
RNU4-55P-201ENST00000410731 METTL3Q86U44 580 aaKnown RBP8.67□□□□□ -1.02
RNU4-55P-201ENST00000410731 SLF2Q8IX21 1173 aa8.67□□□□□ -1.02
RNU4-55P-201ENST00000410731 PLA2G2EQ9NZK7 142 aa8.67□□□□□ -1.02
RNU4-55P-201ENST00000410731 RNF40O75150 1001 aa8.66□□□□□ -1.02
RNU4-55P-201ENST00000410731 SLC4A3P48751 1232 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms