RNA–Protein interactions for RNA: ENST00000409985.5

PMS1-205, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-205ENST00000409985 ANKRD50Q9ULJ7 1429 aa33.1■■■□□ 2.89
PMS1-205ENST00000409985 ZNF518AQ6AHZ1 1483 aa33.09■■■□□ 2.89
PMS1-205ENST00000409985 CCDC7Q96M83 1385 aa33.08■■■□□ 2.89
PMS1-205ENST00000409985 KDM5CP41229 1560 aa33.08■■■□□ 2.89
PMS1-205ENST00000409985 RSPH4AQ5TD94 716 aa33.06■■■□□ 2.88
PMS1-205ENST00000409985 NBPF8Q3BBV2 869 aa33.05■■■□□ 2.88
PMS1-205ENST00000409985 C9orf84Q5VXU9 1444 aa33.05■■■□□ 2.88
PMS1-205ENST00000409985 ZFYVE16Q7Z3T8 1539 aa33■■■□□ 2.87
PMS1-205ENST00000409985 INO80Q9ULG1 1556 aaPredicted RBP33■■■□□ 2.87
PMS1-205ENST00000409985 MAST1Q9Y2H9 1570 aa33■■■□□ 2.87
PMS1-205ENST00000409985 KIDINS220Q9ULH0 1771 aa32.99■■■□□ 2.87
PMS1-205ENST00000409985 TSPY4P0CV99 314 aa32.99■■■□□ 2.87
PMS1-205ENST00000409985 TSPY10P0CW01 314 aa32.99■■■□□ 2.87
PMS1-205ENST00000409985 SPAG9O60271 1321 aaKnown RBP32.99■■■□□ 2.87
PMS1-205ENST00000409985 ZMYM4Q5VZL5 1548 aa32.97■■■□□ 2.87
PMS1-205ENST00000409985 MLH3Q9UHC1 1453 aa32.96■■■□□ 2.87
PMS1-205ENST00000409985 ATP7AQ04656 1500 aa32.96■■■□□ 2.87
PMS1-205ENST00000409985 UHRF1BP1Q6BDS2 1440 aa32.95■■■□□ 2.87
PMS1-205ENST00000409985 HECW2Q9P2P5 1572 aa32.95■■■□□ 2.86
PMS1-205ENST00000409985 YEATS2Q9ULM3 1422 aa32.93■■■□□ 2.86
PMS1-205ENST00000409985 PKD2Q13563 968 aa32.93■■■□□ 2.86
PMS1-205ENST00000409985 RTEL1-TNFRSF6BF6WH68 1400 aa32.93■■■□□ 2.86
PMS1-205ENST00000409985 ARID4BQ4LE39 1312 aaPredicted RBP32.92■■■□□ 2.86
PMS1-205ENST00000409985 NEFLP07196 543 aa32.91■■■□□ 2.86
PMS1-205ENST00000409985 C11orf95C9JLR9 678 aaPredicted RBP32.89■■■□□ 2.86
PMS1-205ENST00000409985 ABCA6Q8N139 1617 aa32.89■■■□□ 2.86
PMS1-205ENST00000409985 PLXNC1O60486 1568 aa32.87■■■□□ 2.85
PMS1-205ENST00000409985 NUP155O75694 1391 aa32.87■■■□□ 2.85
PMS1-205ENST00000409985 PRKRIP1Q9H875 184 aaPredicted RBP32.86■■■□□ 2.85
PMS1-205ENST00000409985 KIF7Q2M1P5 1343 aa32.85■■■□□ 2.85
PMS1-205ENST00000409985 KIF15Q9NS87 1388 aa32.85■■■□□ 2.85
PMS1-205ENST00000409985 FKBP8Q14318 412 aa32.85■■■□□ 2.85
PMS1-205ENST00000409985 DIP2CQ9Y2E4 1556 aa32.85■■■□□ 2.85
PMS1-205ENST00000409985 MYT1LQ9UL68 1186 aa32.84■■■□□ 2.85
PMS1-205ENST00000409985 RALGAPBQ86X10 1494 aa32.83■■■□□ 2.85
PMS1-205ENST00000409985 MAGI2Q86UL8 1455 aa32.82■■■□□ 2.84
PMS1-205ENST00000409985 SIGLEC1Q9BZZ2 1709 aa32.77■■■□□ 2.84
PMS1-205ENST00000409985 ARHGEF40Q8TER5 1519 aa32.76■■■□□ 2.84
PMS1-205ENST00000409985 USP47Q96K76 1375 aa32.76■■■□□ 2.84
PMS1-205ENST00000409985 HNRNPUQ00839 825 aaKnown RBP eCLIP32.76■■■□□ 2.83
PMS1-205ENST00000409985 MYT1Q01538 1121 aa32.74■■■□□ 2.83
PMS1-205ENST00000409985 DUOX2Q9NRD8 1548 aa32.72■■■□□ 2.83
PMS1-205ENST00000409985 ROCK2O75116 1388 aaKnown RBP32.72■■■□□ 2.83
PMS1-205ENST00000409985 A2MP01023 1474 aa32.72■■■□□ 2.83
PMS1-205ENST00000409985 UNC13BO14795 1591 aa32.71■■■□□ 2.83
PMS1-205ENST00000409985 DHX29Q7Z478 1369 aaKnown RBP32.71■■■□□ 2.83
PMS1-205ENST00000409985 ATP10AO60312 1499 aa32.71■■■□□ 2.83
PMS1-205ENST00000409985 FAM135AQ9P2D6 1515 aa32.7■■■□□ 2.82
PMS1-205ENST00000409985 BCORL1Q5H9F3 1711 aa32.69■■■□□ 2.82
PMS1-205ENST00000409985 TSHZ2Q9NRE2 1034 aa32.68■■■□□ 2.82
PMS1-205ENST00000409985 ERICH6BQ5W0A0 696 aa32.66■■■□□ 2.82
PMS1-205ENST00000409985 ERBINQ96RT1 1412 aa32.64■■■□□ 2.82
PMS1-205ENST00000409985 REREQ9P2R6 1566 aa32.63■■■□□ 2.81
PMS1-205ENST00000409985 MRS2Q9HD23 443 aa32.61■■■□□ 2.81
PMS1-205ENST00000409985 ZBED9Q6R2W3 1325 aa32.6■■■□□ 2.81
PMS1-205ENST00000409985 IQGAP3Q86VI3 1631 aa32.58■■■□□ 2.81
PMS1-205ENST00000409985 CCDC184Q52MB2 194 aa32.57■■■□□ 2.8
PMS1-205ENST00000409985 KIF3BO15066 747 aa32.57■■■□□ 2.8
PMS1-205ENST00000409985 EIF2AK4Q9P2K8 1649 aaKnown RBP32.55■■■□□ 2.8
PMS1-205ENST00000409985 BCANQ96GW7 911 aa32.54■■■□□ 2.8
PMS1-205ENST00000409985 AGLP35573 1532 aa32.53■■■□□ 2.8
PMS1-205ENST00000409985 MROH1Q8NDA8 1641 aa32.53■■■□□ 2.8
PMS1-205ENST00000409985 CARD11Q9BXL7 1154 aa32.52■■■□□ 2.8
PMS1-205ENST00000409985 KTN1Q86UP2 1357 aaKnown RBP32.52■■■□□ 2.8
PMS1-205ENST00000409985 CCDC144AA2RUR9 1427 aa32.51■■■□□ 2.79
PMS1-205ENST00000409985 ZNF326Q5BKZ1 582 aaKnown RBP32.5■■■□□ 2.79
PMS1-205ENST00000409985 DEPDC5O75140 1603 aa32.5■■■□□ 2.79
PMS1-205ENST00000409985 LAMC1P11047 1609 aa32.5■■■□□ 2.79
PMS1-205ENST00000409985 RNF17Q9BXT8 1623 aaKnown RBP32.48■■■□□ 2.79
PMS1-205ENST00000409985 TRPM1Q7Z4N2 1603 aa32.48■■■□□ 2.79
PMS1-205ENST00000409985 PRAG1Q86YV5 1406 aa32.46■■■□□ 2.79
PMS1-205ENST00000409985 GGT6Q6P531 493 aa32.45■■■□□ 2.79
PMS1-205ENST00000409985 DCAF11Q8TEB1 546 aa32.45■■■□□ 2.79
PMS1-205ENST00000409985 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.44■■■□□ 2.784e-6■□□□□ 11.1
PMS1-205ENST00000409985 GPRASP1Q5JY77 1395 aa32.44■■■□□ 2.78
PMS1-205ENST00000409985 PLA2R1Q13018 1463 aa32.44■■■□□ 2.78
PMS1-205ENST00000409985 FAM9BQ8IZU0 186 aa32.44■■■□□ 2.78
PMS1-205ENST00000409985 PRDM15P57071 1507 aaPredicted RBP32.43■■■□□ 2.78
PMS1-205ENST00000409985 E9PCH4 1651 aa32.42■■■□□ 2.78
PMS1-205ENST00000409985 MLECQ14165 292 aa32.41■■■□□ 2.78
PMS1-205ENST00000409985 VWDEQ8N2E2 1590 aa32.4■■■□□ 2.78
PMS1-205ENST00000409985 ST20-MTHFSA0A0A6YYL1 179 aa32.35■■■□□ 2.77
PMS1-205ENST00000409985 KDM2AQ9Y2K7 1162 aa32.35■■■□□ 2.77
PMS1-205ENST00000409985 RALBP1Q15311 655 aa32.32■■■□□ 2.76
PMS1-205ENST00000409985 SMG6Q86US8 1419 aaKnown RBP32.31■■■□□ 2.76
PMS1-205ENST00000409985 CEP152O94986 1710 aa32.31■■■□□ 2.76
PMS1-205ENST00000409985 ABCC3O15438 1527 aa32.29■■■□□ 2.76
PMS1-205ENST00000409985 BRD4O60885 1362 aaPredicted RBP32.29■■■□□ 2.76
PMS1-205ENST00000409985 PPP4R2Q9NY27 417 aa32.27■■■□□ 2.76
PMS1-205ENST00000409985 PNISRQ8TF01 805 aaKnown RBP32.25■■■□□ 2.75
PMS1-205ENST00000409985 WASHC2CQ9Y4E1 1318 aa32.25■■■□□ 2.75
PMS1-205ENST00000409985 LMTK2Q8IWU2 1503 aa32.24■■■□□ 2.75
PMS1-205ENST00000409985 KANK1Q14678 1352 aa32.23■■■□□ 2.75
PMS1-205ENST00000409985 STAC3Q96MF2 364 aa32.23■■■□□ 2.75
PMS1-205ENST00000409985 POLR3GLQ9BT43 218 aa32.23■■■□□ 2.75
PMS1-205ENST00000409985 LRPPRCP42704 1394 aaKnown RBP32.23■■■□□ 2.75
PMS1-205ENST00000409985 MYBBP1AQ9BQG0 1328 aaKnown RBP32.23■■■□□ 2.75
PMS1-205ENST00000409985 CLTCQ00610 1675 aaKnown RBP32.22■■■□□ 2.75
PMS1-205ENST00000409985 TET3O43151 1660 aa32.2■■■□□ 2.75
PMS1-205ENST00000409985 ADAMTSL3P82987 1691 aa32.2■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms