RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 CFDP1Q9UEE9 299 aaPredicted RBP10.83□□□□□ -0.68
CXCR4-202ENST00000409817 ABCC5O15440 1437 aa10.83□□□□□ -0.68
CXCR4-202ENST00000409817 CAMSAP2Q08AD1 1489 aa10.83□□□□□ -0.68
CXCR4-202ENST00000409817 ABCC10Q5T3U5 1492 aa10.83□□□□□ -0.68
CXCR4-202ENST00000409817 ABCC2Q92887 1545 aa10.81□□□□□ -0.68
CXCR4-202ENST00000409817 GTPBP6O43824 516 aaPredicted RBP10.81□□□□□ -0.68
CXCR4-202ENST00000409817 ADGRL2O95490 1459 aa10.8□□□□□ -0.68
CXCR4-202ENST00000409817 VGFO15240 615 aaPredicted RBP10.8□□□□□ -0.68
CXCR4-202ENST00000409817 UHRF1BP1LA0JNW5 1464 aa10.8□□□□□ -0.68
CXCR4-202ENST00000409817 CDC42BPAQ5VT25 1732 aa10.8□□□□□ -0.68
CXCR4-202ENST00000409817 ADGBQ8N7X0 1667 aa10.79□□□□□ -0.68
CXCR4-202ENST00000409817 SHANK2Q9UPX8 1470 aa10.79□□□□□ -0.68
CXCR4-202ENST00000409817 STK25O00506 426 aa10.79□□□□□ -0.68
CXCR4-202ENST00000409817 RRP7BPQ9NSQ0 103 aa10.79□□□□□ -0.68
CXCR4-202ENST00000409817 CROCC2H7BZ55 1655 aa10.79□□□□□ -0.68
CXCR4-202ENST00000409817 PYGBP11216 843 aa10.78□□□□□ -0.68
CXCR4-202ENST00000409817 CHIC2Q9UKJ5 165 aa10.78□□□□□ -0.68
CXCR4-202ENST00000409817 SGIP1Q9BQI5 828 aa10.77□□□□□ -0.69
CXCR4-202ENST00000409817 RSPH4AQ5TD94 716 aa10.76□□□□□ -0.69
CXCR4-202ENST00000409817 ZNF644Q9H582 1327 aaPredicted RBP10.76□□□□□ -0.69
CXCR4-202ENST00000409817 NCOA1Q15788 1441 aa10.76□□□□□ -0.69
CXCR4-202ENST00000409817 ARHGEF5Q12774 1597 aa10.76□□□□□ -0.69
CXCR4-202ENST00000409817 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.76□□□□□ -0.69
CXCR4-202ENST00000409817 ZFP91Q96JP5 570 aaPredicted RBP10.76□□□□□ -0.69
CXCR4-202ENST00000409817 ANKRD30AQ9BXX3 1397 aa10.76□□□□□ -0.69
CXCR4-202ENST00000409817 PREX2Q70Z35 1606 aa10.76□□□□□ -0.69
CXCR4-202ENST00000409817 ERCC6L2Q5T890 1561 aa10.75□□□□□ -0.69
CXCR4-202ENST00000409817 TONSLQ96HA7 1378 aa10.75□□□□□ -0.69
CXCR4-202ENST00000409817 SIN3AQ96ST3 1273 aa10.75□□□□□ -0.69
CXCR4-202ENST00000409817 NEUROD1Q13562 356 aa10.74□□□□□ -0.69
CXCR4-202ENST00000409817 KDM5BQ9UGL1 1544 aa10.74□□□□□ -0.69
CXCR4-202ENST00000409817 PPP1R15AO75807 674 aaPredicted RBP10.74□□□□□ -0.69
CXCR4-202ENST00000409817 CHADLQ6NUI6 762 aa10.74□□□□□ -0.69
CXCR4-202ENST00000409817 BCL11BQ9C0K0 894 aaPredicted RBP10.74□□□□□ -0.69
CXCR4-202ENST00000409817 KDM6BO15054 1643 aa10.73□□□□□ -0.69
CXCR4-202ENST00000409817 TRIM52Q96A61 297 aa10.73□□□□□ -0.69
CXCR4-202ENST00000409817 MPHOSPH9Q99550 1183 aa10.72□□□□□ -0.69
CXCR4-202ENST00000409817 PLEKHH2Q8IVE3 1493 aa10.72□□□□□ -0.69
CXCR4-202ENST00000409817 ZNF777Q9ULD5 760 aaPredicted RBP10.72□□□□□ -0.69
CXCR4-202ENST00000409817 CDC42BPBQ9Y5S2 1711 aa10.71□□□□□ -0.69
CXCR4-202ENST00000409817 TSPY4P0CV99 314 aa10.71□□□□□ -0.69
CXCR4-202ENST00000409817 TSPY10P0CW01 314 aa10.71□□□□□ -0.69
CXCR4-202ENST00000409817 DENND4BO75064 1496 aaPredicted RBP10.71□□□□□ -0.69
CXCR4-202ENST00000409817 C9orf84Q5VXU9 1444 aa10.71□□□□□ -0.7
CXCR4-202ENST00000409817 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.71□□□□□ -0.7
CXCR4-202ENST00000409817 CCDC141Q6ZP82 1450 aa10.7□□□□□ -0.7
CXCR4-202ENST00000409817 MBD5Q9P267 1494 aa10.7□□□□□ -0.7
CXCR4-202ENST00000409817 STK24Q9Y6E0 443 aa10.7□□□□□ -0.7
CXCR4-202ENST00000409817 ZCCHC11Q5TAX3 1644 aaKnown RBP10.7□□□□□ -0.7
CXCR4-202ENST00000409817 KIAA1107Q9UPP5 1409 aa10.7□□□□□ -0.7
CXCR4-202ENST00000409817 MYO5CQ9NQX4 1742 aa10.7□□□□□ -0.7
CXCR4-202ENST00000409817 TPRNQ4KMQ1 711 aa10.7□□□□□ -0.7
CXCR4-202ENST00000409817 SAMD9LQ8IVG5 1584 aa10.7□□□□□ -0.7
CXCR4-202ENST00000409817 ANKRD50Q9ULJ7 1429 aa10.69□□□□□ -0.7
CXCR4-202ENST00000409817 TTC37Q6PGP7 1564 aa10.68□□□□□ -0.7
CXCR4-202ENST00000409817 MAST1Q9Y2H9 1570 aa10.68□□□□□ -0.7
CXCR4-202ENST00000409817 ARAP3Q8WWN8 1544 aa10.68□□□□□ -0.7
CXCR4-202ENST00000409817 ARHGAP5Q13017 1502 aa10.68□□□□□ -0.7
CXCR4-202ENST00000409817 ANKRD30BQ9BXX2 1392 aa10.68□□□□□ -0.7
CXCR4-202ENST00000409817 PLCH2O75038 1416 aa10.67□□□□□ -0.7
CXCR4-202ENST00000409817 KDM5DQ9BY66 1539 aa10.67□□□□□ -0.7
CXCR4-202ENST00000409817 PZPP20742 1482 aa10.66□□□□□ -0.7
CXCR4-202ENST00000409817 RPRD2Q5VT52 1461 aaKnown RBP10.66□□□□□ -0.7
CXCR4-202ENST00000409817 FARP1Q9Y4F1 1045 aaPredicted RBP10.66□□□□□ -0.7
CXCR4-202ENST00000409817 TSPYL2Q9H2G4 693 aaPredicted RBP10.65□□□□□ -0.7
CXCR4-202ENST00000409817 KIF15Q9NS87 1388 aa10.64□□□□□ -0.71
CXCR4-202ENST00000409817 CENPBP07199 599 aaPredicted RBP10.64□□□□□ -0.71
CXCR4-202ENST00000409817 SYCP2Q9BX26 1530 aa10.64□□□□□ -0.71
CXCR4-202ENST00000409817 PLXNC1O60486 1568 aa10.64□□□□□ -0.71
CXCR4-202ENST00000409817 HNRNPMP52272 730 aaKnown RBP eCLIP10.64□□□□□ -0.71
CXCR4-202ENST00000409817 EFCAB2Q5VUJ9 269 aa10.64□□□□□ -0.71
CXCR4-202ENST00000409817 WDR7Q9Y4E6 1490 aa10.63□□□□□ -0.71
CXCR4-202ENST00000409817 POTEHQ6S545 545 aa10.61□□□□□ -0.71
CXCR4-202ENST00000409817 ABCC1P33527 1531 aa10.6□□□□□ -0.71
CXCR4-202ENST00000409817 CCDC61Q9Y6R9 512 aa10.6□□□□□ -0.71
CXCR4-202ENST00000409817 NUP155O75694 1391 aa10.6□□□□□ -0.71
CXCR4-202ENST00000409817 TEX14Q8IWB6 1497 aa10.6□□□□□ -0.71
CXCR4-202ENST00000409817 KCNH8Q96L42 1107 aa10.59□□□□□ -0.71
CXCR4-202ENST00000409817 DUOX2Q9NRD8 1548 aa10.59□□□□□ -0.71
CXCR4-202ENST00000409817 ABCA9Q8IUA7 1624 aa10.59□□□□□ -0.71
CXCR4-202ENST00000409817 ZNF467Q7Z7K2 595 aaPredicted RBP10.58□□□□□ -0.72
CXCR4-202ENST00000409817 L3MBTL2Q969R5 705 aa10.58□□□□□ -0.72
CXCR4-202ENST00000409817 PCDHB8Q9UN66 801 aa10.58□□□□□ -0.72
CXCR4-202ENST00000409817 PCDHB13Q9Y5F0 798 aa10.58□□□□□ -0.72
CXCR4-202ENST00000409817 RTEL1-TNFRSF6BF6WH68 1400 aa10.58□□□□□ -0.72
CXCR4-202ENST00000409817 ERBINQ96RT1 1412 aa10.58□□□□□ -0.72
CXCR4-202ENST00000409817 UNC13BO14795 1591 aa10.58□□□□□ -0.72
CXCR4-202ENST00000409817 PRKAR2AP13861 404 aaKnown RBP10.57□□□□□ -0.72
CXCR4-202ENST00000409817 NBR1Q14596 966 aa10.57□□□□□ -0.72
CXCR4-202ENST00000409817 FXR2P51116 673 aaKnown RBP eCLIP10.57□□□□□ -0.72
CXCR4-202ENST00000409817 RYDENQ9NUL5 291 aaKnown RBP10.57□□□□□ -0.72
CXCR4-202ENST00000409817 ARHGEF12Q9NZN5 1544 aa10.56□□□□□ -0.72
CXCR4-202ENST00000409817 FAM135AQ9P2D6 1515 aa10.55□□□□□ -0.72
CXCR4-202ENST00000409817 ASXL2Q76L83 1435 aa10.55□□□□□ -0.72
CXCR4-202ENST00000409817 PDAP1Q13442 181 aaKnown RBP10.55□□□□□ -0.72
CXCR4-202ENST00000409817 MAGI2Q86UL8 1455 aa10.55□□□□□ -0.72
CXCR4-202ENST00000409817 EIF4G2P78344 907 aaKnown RBP eCLIP10.54□□□□□ -0.72
CXCR4-202ENST00000409817 IQGAP3Q86VI3 1631 aa10.54□□□□□ -0.72
CXCR4-202ENST00000409817 FANCAO15360 1455 aa10.53□□□□□ -0.72
CXCR4-202ENST00000409817 CADPS2Q86UW7 1296 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms