RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 ZNF454Q8N9F8 522 aa11.29□□□□□ -0.6
LSM5-203ENST00000409782 DDX12PQ92771 950 aa11.29□□□□□ -0.6
LSM5-203ENST00000409782 POTEGQ6S5H5 508 aa11.28□□□□□ -0.6
LSM5-203ENST00000409782 JPH4Q96JJ6 628 aa11.28□□□□□ -0.6
LSM5-203ENST00000409782 GRXCR2A6NFK2 248 aa11.27□□□□□ -0.61
LSM5-203ENST00000409782 POTEMA6NI47 508 aa11.27□□□□□ -0.61
LSM5-203ENST00000409782 SEMA3EO15041 775 aa11.27□□□□□ -0.61
LSM5-203ENST00000409782 FOSBP53539 338 aa11.27□□□□□ -0.61
LSM5-203ENST00000409782 ZMYND10O75800 440 aa11.26□□□□□ -0.61
LSM5-203ENST00000409782 PHF14O94880 888 aa11.26□□□□□ -0.61
LSM5-203ENST00000409782 NEUROD2Q15784 382 aa11.26□□□□□ -0.61
LSM5-203ENST00000409782 HS3ST6Q96QI5 342 aa11.26□□□□□ -0.61
LSM5-203ENST00000409782 EPAS1Q99814 870 aa11.25□□□□□ -0.61
LSM5-203ENST00000409782 FBXW7Q969H0 707 aa11.24□□□□□ -0.61
LSM5-203ENST00000409782 PCDHGA10Q9Y5H3 936 aa11.24□□□□□ -0.61
LSM5-203ENST00000409782 TYW1BQ6NUM6 668 aa11.23□□□□□ -0.61
LSM5-203ENST00000409782 ZDHHC16Q969W1 377 aa11.23□□□□□ -0.61
LSM5-203ENST00000409782 SLC24A3Q9HC58 644 aa11.23□□□□□ -0.61
LSM5-203ENST00000409782 MLLT3P42568 568 aaPredicted RBP11.22□□□□□ -0.61
LSM5-203ENST00000409782 SMARCA4P51532 1647 aa11.21□□□□□ -0.61
LSM5-203ENST00000409782 POTEB3A0JP26 581 aa11.2□□□□□ -0.62
LSM5-203ENST00000409782 POTEBQ6S5H4 581 aa11.2□□□□□ -0.62
LSM5-203ENST00000409782 ZNF687Q8N1G0 1237 aa11.2□□□□□ -0.62
LSM5-203ENST00000409782 KCNH8Q96L42 1107 aa11.2□□□□□ -0.62
LSM5-203ENST00000409782 BAZ1AQ9NRL2 1556 aaPredicted RBP11.2□□□□□ -0.62
LSM5-203ENST00000409782 BARGINQ6ZT62 677 aa11.19□□□□□ -0.62
LSM5-203ENST00000409782 NCAPD3P42695 1498 aa11.18□□□□□ -0.62
LSM5-203ENST00000409782 SMARCA2P51531 1590 aa11.17□□□□□ -0.62
LSM5-203ENST00000409782 OSBPP22059 807 aa11.17□□□□□ -0.62
LSM5-203ENST00000409782 RBM33Q96EV2 1170 aaKnown RBP11.17□□□□□ -0.62
LSM5-203ENST00000409782 BCL2L12Q9HB09 334 aa11.17□□□□□ -0.62
LSM5-203ENST00000409782 MAP3K7O43318 606 aa11.16□□□□□ -0.62
LSM5-203ENST00000409782 PBX2P40425 430 aa11.16□□□□□ -0.62
LSM5-203ENST00000409782 ADAM33Q9BZ11 813 aa11.16□□□□□ -0.62
LSM5-203ENST00000409782 ATAD2BQ9ULI0 1458 aa11.16□□□□□ -0.62
LSM5-203ENST00000409782 PTPREP23469 700 aa11.15□□□□□ -0.62
LSM5-203ENST00000409782 EN1Q05925 392 aaPredicted RBP11.15□□□□□ -0.62
LSM5-203ENST00000409782 HMGXB3Q12766 1538 aa11.14□□□□□ -0.63
LSM5-203ENST00000409782 CDAN1Q8IWY9 1227 aa11.14□□□□□ -0.63
LSM5-203ENST00000409782 PEG3Q9GZU2 1588 aa11.13□□□□□ -0.63
LSM5-203ENST00000409782 ARHGAP33O14559 1287 aa11.13□□□□□ -0.63
LSM5-203ENST00000409782 KCNK17Q96T54 332 aa11.13□□□□□ -0.63
LSM5-203ENST00000409782 C6orf132Q5T0Z8 1188 aa11.12□□□□□ -0.63
LSM5-203ENST00000409782 AK7Q96M32 723 aa11.11□□□□□ -0.63
LSM5-203ENST00000409782 PCDH10Q9P2E7 1040 aa11.1□□□□□ -0.63
LSM5-203ENST00000409782 AXIN2Q9Y2T1 843 aa11.1□□□□□ -0.63
LSM5-203ENST00000409782 NUTM2FA1L443 756 aa11.09□□□□□ -0.63
LSM5-203ENST00000409782 PRIM1P49642 420 aaKnown RBP11.08□□□□□ -0.64
LSM5-203ENST00000409782 PSEN2P49810 448 aa11.08□□□□□ -0.64
LSM5-203ENST00000409782 RBM26Q5T8P6 1007 aaKnown RBP11.08□□□□□ -0.64
LSM5-203ENST00000409782 MROH2BQ7Z745 1585 aa11.07□□□□□ -0.64
LSM5-203ENST00000409782 TSR1Q2NL82 804 aaKnown RBP11.07□□□□□ -0.64
LSM5-203ENST00000409782 POTEEQ6S8J3 1075 aa11.07□□□□□ -0.64
LSM5-203ENST00000409782 BAZ1BQ9UIG0 1483 aaKnown RBP11.06□□□□□ -0.64
LSM5-203ENST00000409782 PPP1R3GB7ZBB8 358 aa11.06□□□□□ -0.64
LSM5-203ENST00000409782 CERKQ8TCT0 537 aa11.06□□□□□ -0.64
LSM5-203ENST00000409782 LSM11P83369 360 aaKnown RBP eCLIP11.05□□□□□ -0.64
LSM5-203ENST00000409782 GPIHBP1Q8IV16 184 aa11.04□□□□□ -0.64
LSM5-203ENST00000409782 ANKRD13DQ6ZTN6 518 aa11.03□□□□□ -0.64
LSM5-203ENST00000409782 KRTAP3-3Q9BYR6 98 aa11.03□□□□□ -0.64
LSM5-203ENST00000409782 KRTAP3-2Q9BYR7 98 aa11.03□□□□□ -0.64
LSM5-203ENST00000409782 COL9A1P20849 921 aa11.02□□□□□ -0.65
LSM5-203ENST00000409782 DMRTA1Q5VZB9 504 aa11.02□□□□□ -0.65
LSM5-203ENST00000409782 CDHR5Q9HBB8 845 aa11.02□□□□□ -0.65
LSM5-203ENST00000409782 FCHSD2O94868 740 aa11□□□□□ -0.65
LSM5-203ENST00000409782 TK2O00142 265 aa10.99□□□□□ -0.65
LSM5-203ENST00000409782 PTGDRQ13258 359 aa10.99□□□□□ -0.65
LSM5-203ENST00000409782 ZBED2Q9BTP6 218 aa10.99□□□□□ -0.65
LSM5-203ENST00000409782 SLC4A5Q9BY07 1137 aa10.99□□□□□ -0.65
LSM5-203ENST00000409782 NPDC1Q9NQX5 325 aaPredicted RBP10.98□□□□□ -0.65
LSM5-203ENST00000409782 SUPT5HO00267 1087 aaKnown RBP10.97□□□□□ -0.65
LSM5-203ENST00000409782 PRSS12P56730 875 aa10.97□□□□□ -0.65
LSM5-203ENST00000409782 ADGRD1Q6QNK2 874 aa10.96□□□□□ -0.65
LSM5-203ENST00000409782 CDCA7LQ96GN5 454 aa10.96□□□□□ -0.65
LSM5-203ENST00000409782 KDM4CQ9H3R0 1056 aa10.96□□□□□ -0.65
LSM5-203ENST00000409782 VPS9D1Q9Y2B5 631 aa10.96□□□□□ -0.65
LSM5-203ENST00000409782 TRIM66O15016 1216 aa10.95□□□□□ -0.66
LSM5-203ENST00000409782 ONECUT3O60422 494 aaPredicted RBP10.95□□□□□ -0.66
LSM5-203ENST00000409782 HIC1Q14526 733 aa10.95□□□□□ -0.66
LSM5-203ENST00000409782 PROX2Q3B8N5 592 aa10.95□□□□□ -0.66
LSM5-203ENST00000409782 KRI1Q8N9T8 703 aaKnown RBP10.95□□□□□ -0.66
LSM5-203ENST00000409782 STAC3Q96MF2 364 aa10.95□□□□□ -0.66
LSM5-203ENST00000409782 RBM27Q9P2N5 1060 aaKnown RBP10.95□□□□□ -0.66
LSM5-203ENST00000409782 TRIM6-TRIM34B2RNG4 842 aa10.94□□□□□ -0.66
LSM5-203ENST00000409782 PACS2Q86VP3 889 aa10.94□□□□□ -0.66
LSM5-203ENST00000409782 GPBP1L1Q9HC44 474 aaPredicted RBP10.94□□□□□ -0.66
LSM5-203ENST00000409782 WIZO95785 1651 aa10.94□□□□□ -0.66
LSM5-203ENST00000409782 PDE4DQ08499 809 aa10.93□□□□□ -0.66
LSM5-203ENST00000409782 ZMYND15Q9H091 742 aa10.92□□□□□ -0.66
LSM5-203ENST00000409782 RABGEF1Q9UJ41 708 aa10.92□□□□□ -0.66
LSM5-203ENST00000409782 ERCC6Q03468 1493 aa10.92□□□□□ -0.66
LSM5-203ENST00000409782 RSF1Q96T23 1441 aaPredicted RBP10.92□□□□□ -0.66
LSM5-203ENST00000409782 LAMC3Q9Y6N6 1575 aa10.91□□□□□ -0.66
LSM5-203ENST00000409782 GNPATO15228 680 aa10.91□□□□□ -0.66
LSM5-203ENST00000409782 NBPF3Q9H094 633 aa10.91□□□□□ -0.66
LSM5-203ENST00000409782 KIAA1468Q9P260 1216 aa10.91□□□□□ -0.66
LSM5-203ENST00000409782 PADI6Q6TGC4 694 aa10.9□□□□□ -0.66
LSM5-203ENST00000409782 TSKSQ9UJT2 592 aa10.9□□□□□ -0.66
LSM5-203ENST00000409782 NESP48681 1621 aa10.89□□□□□ -0.67
LSM5-203ENST00000409782 GPR37O15354 613 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms