RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 PTPREP23469 700 aa10.25□□□□□ -0.77
PMS1-203ENST00000409593 PBX2P40425 430 aa10.25□□□□□ -0.77
PMS1-203ENST00000409593 PSEN2P49810 448 aa10.25□□□□□ -0.77
PMS1-203ENST00000409593 EN1Q05925 392 aaPredicted RBP10.25□□□□□ -0.77
PMS1-203ENST00000409593 TESPA1A2RU30 521 aaPredicted RBP10.25□□□□□ -0.77
PMS1-203ENST00000409593 ARHGAP33O14559 1287 aa10.25□□□□□ -0.77
PMS1-203ENST00000409593 OSBPP22059 807 aa10.25□□□□□ -0.77
PMS1-203ENST00000409593 PRIM1P49642 420 aaKnown RBP10.23□□□□□ -0.77
PMS1-203ENST00000409593 TSR1Q2NL82 804 aaKnown RBP10.22□□□□□ -0.77
PMS1-203ENST00000409593 SMYD5Q6GMV2 418 aa10.22□□□□□ -0.77
PMS1-203ENST00000409593 C6orf132Q5T0Z8 1188 aa10.21□□□□□ -0.78
PMS1-203ENST00000409593 LSM11P83369 360 aaKnown RBP eCLIP10.2□□□□□ -0.78
PMS1-203ENST00000409593 DMRTA1Q5VZB9 504 aa10.2□□□□□ -0.78
PMS1-203ENST00000409593 ANKRD13DQ6ZTN6 518 aa10.2□□□□□ -0.78
PMS1-203ENST00000409593 TULP1O00294 542 aaPredicted RBP10.19□□□□□ -0.78
PMS1-203ENST00000409593 CDHR5Q9HBB8 845 aa10.18□□□□□ -0.78
PMS1-203ENST00000409593 PPP1R3GB7ZBB8 358 aa10.18□□□□□ -0.78
PMS1-203ENST00000409593 COL9A1P20849 921 aa10.18□□□□□ -0.78
PMS1-203ENST00000409593 RBM26Q5T8P6 1007 aaKnown RBP10.17□□□□□ -0.78
PMS1-203ENST00000409593 NUTM2FA1L443 756 aa10.16□□□□□ -0.78
PMS1-203ENST00000409593 ADGRD1Q6QNK2 874 aa10.13□□□□□ -0.79
PMS1-203ENST00000409593 BCANQ96GW7 911 aa10.13□□□□□ -0.79
PMS1-203ENST00000409593 ZBED2Q9BTP6 218 aa10.13□□□□□ -0.79
PMS1-203ENST00000409593 PROX2Q3B8N5 592 aa10.12□□□□□ -0.79
PMS1-203ENST00000409593 CERKQ8TCT0 537 aa10.11□□□□□ -0.79
PMS1-203ENST00000409593 TK2O00142 265 aa10.1□□□□□ -0.79
PMS1-203ENST00000409593 VPS9D1Q9Y2B5 631 aa10.1□□□□□ -0.79
PMS1-203ENST00000409593 GPIHBP1Q8IV16 184 aa10.09□□□□□ -0.79
PMS1-203ENST00000409593 LMOD2Q6P5Q4 547 aa10.08□□□□□ -0.8
PMS1-203ENST00000409593 SLC4A5Q9BY07 1137 aa10.08□□□□□ -0.8
PMS1-203ENST00000409593 TRIM6-TRIM34B2RNG4 842 aa10.07□□□□□ -0.8
PMS1-203ENST00000409593 PTGDRQ13258 359 aa10.07□□□□□ -0.8
PMS1-203ENST00000409593 CDCA7LQ96GN5 454 aa10.07□□□□□ -0.8
PMS1-203ENST00000409593 NPDC1Q9NQX5 325 aaPredicted RBP10.07□□□□□ -0.8
PMS1-203ENST00000409593 FCHSD2O94868 740 aa10.06□□□□□ -0.8
PMS1-203ENST00000409593 PRSS12P56730 875 aa10.06□□□□□ -0.8
PMS1-203ENST00000409593 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.06□□□□□ -0.8
PMS1-203ENST00000409593 RNF166Q96A37 237 aaPredicted RBP10.06□□□□□ -0.8
PMS1-203ENST00000409593 STAC3Q96MF2 364 aa10.06□□□□□ -0.8
PMS1-203ENST00000409593 PADI6Q6TGC4 694 aa10.05□□□□□ -0.8
PMS1-203ENST00000409593 TSKSQ9UJT2 592 aa10.05□□□□□ -0.8
PMS1-203ENST00000409593 HRO43593 1189 aa10.04□□□□□ -0.8
PMS1-203ENST00000409593 KIAA1468Q9P260 1216 aa10.04□□□□□ -0.8
PMS1-203ENST00000409593 RABGEF1Q9UJ41 708 aa10.04□□□□□ -0.8
PMS1-203ENST00000409593 NBPF3Q9H094 633 aa10.03□□□□□ -0.8
PMS1-203ENST00000409593 RBM27Q9P2N5 1060 aaKnown RBP10.02□□□□□ -0.8
PMS1-203ENST00000409593 HIC1Q14526 733 aa10.02□□□□□ -0.81
PMS1-203ENST00000409593 PACS2Q86VP3 889 aa10.02□□□□□ -0.81
PMS1-203ENST00000409593 MRPL50Q8N5N7 158 aaKnown RBP10.02□□□□□ -0.81
PMS1-203ENST00000409593 FAM198AQ9UFP1 575 aa10.02□□□□□ -0.81
PMS1-203ENST00000409593 GPR37O15354 613 aa10.01□□□□□ -0.81
PMS1-203ENST00000409593 SEPT9Q9UHD8 586 aaPredicted RBP10.01□□□□□ -0.81
PMS1-203ENST00000409593 ONECUT3O60422 494 aaPredicted RBP10□□□□□ -0.81
PMS1-203ENST00000409593 MYT1LQ9UL68 1186 aa10□□□□□ -0.81
PMS1-203ENST00000409593 NBPF26B4DH59 902 aa9.99□□□□□ -0.81
PMS1-203ENST00000409593 GNPATO15228 680 aa9.99□□□□□ -0.81
PMS1-203ENST00000409593 BHMG1C9JSJ3 638 aaPredicted RBP9.99□□□□□ -0.81
PMS1-203ENST00000409593 SMAPO00193 183 aa9.99□□□□□ -0.81
PMS1-203ENST00000409593 PNMA3Q9UL41 463 aa9.99□□□□□ -0.81
PMS1-203ENST00000409593 GOLGA8CPA6NN73 597 aa9.98□□□□□ -0.81
PMS1-203ENST00000409593 FECHP22830 423 aa9.96□□□□□ -0.81
PMS1-203ENST00000409593 NUDT18Q6ZVK8 323 aa9.96□□□□□ -0.81
PMS1-203ENST00000409593 TTC13Q8NBP0 860 aa9.96□□□□□ -0.81
PMS1-203ENST00000409593 TATDN2Q93075 761 aa9.96□□□□□ -0.81
PMS1-203ENST00000409593 C3orf80F5H4A9 247 aa9.95□□□□□ -0.82
PMS1-203ENST00000409593 FAM161AQ3B820 660 aa9.95□□□□□ -0.82
PMS1-203ENST00000409593 FAM98CQ17RN3 349 aaKnown RBP9.93□□□□□ -0.82
PMS1-203ENST00000409593 LAPTM4BQ86VI4 370 aa9.93□□□□□ -0.82
PMS1-203ENST00000409593 KCTD12Q96CX2 325 aaKnown RBP9.93□□□□□ -0.82
PMS1-203ENST00000409593 ZC3H15Q8WU90 426 aaKnown RBP9.93□□□□□ -0.82
PMS1-203ENST00000409593 WNT2BQ93097 391 aa9.92□□□□□ -0.82
PMS1-203ENST00000409593 ADGRG1Q9Y653 693 aa9.92□□□□□ -0.82
PMS1-203ENST00000409593 RBM46Q8TBY0 533 aaKnown RBP9.91□□□□□ -0.82
PMS1-203ENST00000409593 ZFRQ96KR1 1074 aaKnown RBP9.91□□□□□ -0.82
PMS1-203ENST00000409593 ANKK1Q8NFD2 765 aa9.9□□□□□ -0.83
PMS1-203ENST00000409593 MAP2K5Q13163 448 aa9.89□□□□□ -0.83
PMS1-203ENST00000409593 KRI1Q8N9T8 703 aaKnown RBP9.88□□□□□ -0.83
PMS1-203ENST00000409593 OATP04181 439 aa9.87□□□□□ -0.83
PMS1-203ENST00000409593 EYA1Q99502 592 aa9.87□□□□□ -0.83
PMS1-203ENST00000409593 RNF40O75150 1001 aa9.86□□□□□ -0.83
PMS1-203ENST00000409593 ZMYND10O75800 440 aa9.86□□□□□ -0.83
PMS1-203ENST00000409593 BCAMP50895 628 aa9.86□□□□□ -0.83
PMS1-203ENST00000409593 SAMD7Q7Z3H4 446 aa9.86□□□□□ -0.83
PMS1-203ENST00000409593 METTL3Q86U44 580 aaKnown RBP9.86□□□□□ -0.83
PMS1-203ENST00000409593 PXYLP1Q8TE99 480 aa9.86□□□□□ -0.83
PMS1-203ENST00000409593 LRCH3Q96II8 777 aa9.86□□□□□ -0.83
PMS1-203ENST00000409593 DNAJB2P25686 324 aa9.85□□□□□ -0.83
PMS1-203ENST00000409593 HDGFP51858 240 aaKnown RBP9.85□□□□□ -0.83
PMS1-203ENST00000409593 THSD4Q6ZMP0 1018 aa9.85□□□□□ -0.83
PMS1-203ENST00000409593 BARGINQ6ZT62 677 aa9.85□□□□□ -0.83
PMS1-203ENST00000409593 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.85□□□□□ -0.83
PMS1-203ENST00000409593 MINK1Q8N4C8 1332 aaPredicted RBP9.84□□□□□ -0.83
PMS1-203ENST00000409593 RCCD1A6NED2 376 aa9.84□□□□□ -0.83
PMS1-203ENST00000409593 CCDC102AQ96A19 550 aa9.84□□□□□ -0.83
PMS1-203ENST00000409593 IRF6O14896 467 aa9.83□□□□□ -0.84
PMS1-203ENST00000409593 PTPN5P54829 565 aa9.83□□□□□ -0.84
PMS1-203ENST00000409593 SOWAHBA6NEL2 793 aa9.83□□□□□ -0.84
PMS1-203ENST00000409593 SWT1Q5T5J6 900 aaKnown RBP9.83□□□□□ -0.84
PMS1-203ENST00000409593 NLRP7Q8WX94 980 aa9.82□□□□□ -0.84
PMS1-203ENST00000409593 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms