RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 CD109Q6YHK3 1445 aa27.14■■□□□ 1.94
LIMS2-204ENST00000409286 ANP32CO43423 234 aa27.14■■□□□ 1.93
LIMS2-204ENST00000409286 RIMBP3CA6NJZ7 1639 aa27.11■■□□□ 1.93
LIMS2-204ENST00000409286 RIMBP3BA6NNM3 1639 aa27.11■■□□□ 1.93
LIMS2-204ENST00000409286 RIMBP3Q9UFD9 1639 aa27.11■■□□□ 1.93
LIMS2-204ENST00000409286 CCER2I3L3R5 266 aa27.1■■□□□ 1.93
LIMS2-204ENST00000409286 DHX29Q7Z478 1369 aaKnown RBP27.09■■□□□ 1.93
LIMS2-204ENST00000409286 RALGAPBQ86X10 1494 aa27.09■■□□□ 1.93
LIMS2-204ENST00000409286 ZNF518AQ6AHZ1 1483 aa27.07■■□□□ 1.92
LIMS2-204ENST00000409286 CCDC7Q96M83 1385 aa27.07■■□□□ 1.92
LIMS2-204ENST00000409286 DEPDC5O75140 1603 aa27.06■■□□□ 1.92
LIMS2-204ENST00000409286 ZNF326Q5BKZ1 582 aaKnown RBP27.06■■□□□ 1.92
LIMS2-204ENST00000409286 DCAF11Q8TEB1 546 aa27.06■■□□□ 1.92
LIMS2-204ENST00000409286 MYT1LQ9UL68 1186 aa27.04■■□□□ 1.92
LIMS2-204ENST00000409286 EIF2AK4Q9P2K8 1649 aaKnown RBP27.03■■□□□ 1.92
LIMS2-204ENST00000409286 KANK1Q14678 1352 aa27.03■■□□□ 1.92
LIMS2-204ENST00000409286 C11orf95C9JLR9 678 aaPredicted RBP27.02■■□□□ 1.92
LIMS2-204ENST00000409286 USP47Q96K76 1375 aa27.02■■□□□ 1.92
LIMS2-204ENST00000409286 KDM2AQ9Y2K7 1162 aa27.01■■□□□ 1.92
LIMS2-204ENST00000409286 NEO1Q92859 1461 aa27■■□□□ 1.91
LIMS2-204ENST00000409286 VWDEQ8N2E2 1590 aa27■■□□□ 1.91
LIMS2-204ENST00000409286 POGZQ7Z3K3 1410 aa27■■□□□ 1.91
LIMS2-204ENST00000409286 CNTLNQ9NXG0 1405 aa26.98■■□□□ 1.91
LIMS2-204ENST00000409286 KIDINS220Q9ULH0 1771 aa26.98■■□□□ 1.91
LIMS2-204ENST00000409286 GLI2P10070 1586 aa26.98■■□□□ 1.91
LIMS2-204ENST00000409286 CYB5RLQ6IPT4 315 aa26.98■■□□□ 1.91
LIMS2-204ENST00000409286 KDM5CP41229 1560 aa26.97■■□□□ 1.91
LIMS2-204ENST00000409286 MLH3Q9UHC1 1453 aa26.97■■□□□ 1.91
LIMS2-204ENST00000409286 KIF3BO15066 747 aa26.97■■□□□ 1.91
LIMS2-204ENST00000409286 PTPRTO14522 1441 aa26.96■■□□□ 1.91
LIMS2-204ENST00000409286 ARID4BQ4LE39 1312 aaPredicted RBP26.96■■□□□ 1.91
LIMS2-204ENST00000409286 CARD11Q9BXL7 1154 aa26.96■■□□□ 1.91
LIMS2-204ENST00000409286 PRAG1Q86YV5 1406 aa26.96■■□□□ 1.91
LIMS2-204ENST00000409286 POLR1AO95602 1720 aaPredicted RBP26.96■■□□□ 1.91
LIMS2-204ENST00000409286 KIF7Q2M1P5 1343 aa26.95■■□□□ 1.91
LIMS2-204ENST00000409286 E9PCH4 1651 aa26.95■■□□□ 1.9
LIMS2-204ENST00000409286 TET3O43151 1660 aa26.95■■□□□ 1.9
LIMS2-204ENST00000409286 A2MP01023 1474 aa26.94■■□□□ 1.9
LIMS2-204ENST00000409286 MAP3K4Q9Y6R4 1608 aa26.94■■□□□ 1.9
LIMS2-204ENST00000409286 PRDM15P57071 1507 aaPredicted RBP26.94■■□□□ 1.9
LIMS2-204ENST00000409286 GTF3C3Q9Y5Q9 886 aa26.94■■□□□ 1.9
LIMS2-204ENST00000409286 RGL3Q3MIN7 710 aa26.93■■□□□ 1.9
LIMS2-204ENST00000409286 TRPM2O94759 1503 aa26.92■■□□□ 1.9
LIMS2-204ENST00000409286 MROH1Q8NDA8 1641 aa26.89■■□□□ 1.89
LIMS2-204ENST00000409286 ROCK2O75116 1388 aaKnown RBP26.89■■□□□ 1.89
LIMS2-204ENST00000409286 HECW2Q9P2P5 1572 aa26.87■■□□□ 1.89
LIMS2-204ENST00000409286 STAC3Q96MF2 364 aa26.87■■□□□ 1.89
LIMS2-204ENST00000409286 GPRASP1Q5JY77 1395 aa26.86■■□□□ 1.89
LIMS2-204ENST00000409286 TRPM1Q7Z4N2 1603 aa26.86■■□□□ 1.89
LIMS2-204ENST00000409286 LMTK2Q8IWU2 1503 aa26.85■■□□□ 1.89
LIMS2-204ENST00000409286 SPHKAPQ2M3C7 1700 aa26.85■■□□□ 1.89
LIMS2-204ENST00000409286 BCORL1Q5H9F3 1711 aa26.84■■□□□ 1.89
LIMS2-204ENST00000409286 RNF17Q9BXT8 1623 aaKnown RBP26.83■■□□□ 1.89
LIMS2-204ENST00000409286 LAMC1P11047 1609 aa26.81■■□□□ 1.88
LIMS2-204ENST00000409286 DIP2BQ9P265 1576 aa26.8■■□□□ 1.88
LIMS2-204ENST00000409286 ST20-MTHFSA0A0A6YYL1 179 aa26.79■■□□□ 1.88
LIMS2-204ENST00000409286 FRMPD1Q5SYB0 1578 aa26.79■■□□□ 1.88
LIMS2-204ENST00000409286 NEURL4Q96JN8 1562 aa26.79■■□□□ 1.88
LIMS2-204ENST00000409286 EFCAB6Q5THR3 1501 aa26.79■■□□□ 1.88
LIMS2-204ENST00000409286 CEP152O94986 1710 aa26.78■■□□□ 1.88
LIMS2-204ENST00000409286 CLTCL1P53675 1640 aa26.78■■□□□ 1.88
LIMS2-204ENST00000409286 RAPGEF3O95398 923 aa26.76■■□□□ 1.87
LIMS2-204ENST00000409286 NBPF1Q3BBV0 1214 aa26.76■■□□□ 1.87
LIMS2-204ENST00000409286 PRKRIP1Q9H875 184 aaPredicted RBP26.76■■□□□ 1.87
LIMS2-204ENST00000409286 ABCA6Q8N139 1617 aa26.75■■□□□ 1.87
LIMS2-204ENST00000409286 RICTORQ6R327 1708 aa26.75■■□□□ 1.87
LIMS2-204ENST00000409286 PPRC1Q5VV67 1664 aaKnown RBP26.71■■□□□ 1.87
LIMS2-204ENST00000409286 FAM69CQ0P6D2 419 aa26.7■■□□□ 1.87
LIMS2-204ENST00000409286 DIP2CQ9Y2E4 1556 aa26.68■■□□□ 1.86
LIMS2-204ENST00000409286 MADDQ8WXG6 1647 aa26.67■■□□□ 1.86
LIMS2-204ENST00000409286 GGT6Q6P531 493 aa26.67■■□□□ 1.86
LIMS2-204ENST00000409286 POLR3GLQ9BT43 218 aa26.66■■□□□ 1.86
LIMS2-204ENST00000409286 ZMYM4Q5VZL5 1548 aa26.64■■□□□ 1.86
LIMS2-204ENST00000409286 ABCC3O15438 1527 aa26.63■■□□□ 1.85
LIMS2-204ENST00000409286 WASHC2CQ9Y4E1 1318 aa26.63■■□□□ 1.85
LIMS2-204ENST00000409286 NPATQ14207 1427 aa26.62■■□□□ 1.85
LIMS2-204ENST00000409286 TESK2Q96S53 571 aa26.6■■□□□ 1.85
LIMS2-204ENST00000409286 MYOM2P54296 1465 aa26.6■■□□□ 1.85
LIMS2-204ENST00000409286 KIF1BO60333 1816 aa26.6■■□□□ 1.85
LIMS2-204ENST00000409286 UGGT1Q9NYU2 1555 aa26.58■■□□□ 1.85
LIMS2-204ENST00000409286 YEATS2Q9ULM3 1422 aa26.57■■□□□ 1.84
LIMS2-204ENST00000409286 COL17A1Q9UMD9 1497 aaPredicted RBP26.56■■□□□ 1.84
LIMS2-204ENST00000409286 KIAA1210Q9ULL0 1709 aa26.56■■□□□ 1.84
LIMS2-204ENST00000409286 TSPOAP1O95153 1857 aa26.55■■□□□ 1.84
LIMS2-204ENST00000409286 TMF1P82094 1093 aa26.54■■□□□ 1.84
LIMS2-204ENST00000409286 ARHGAP31Q2M1Z3 1444 aa26.54■■□□□ 1.84
LIMS2-204ENST00000409286 SCAF11Q99590 1463 aaKnown RBP26.54■■□□□ 1.84
LIMS2-204ENST00000409286 CCDC184Q52MB2 194 aa26.53■■□□□ 1.84
LIMS2-204ENST00000409286 MRS2Q9HD23 443 aa26.53■■□□□ 1.84
LIMS2-204ENST00000409286 KIF13AQ9H1H9 1805 aa26.53■■□□□ 1.84
LIMS2-204ENST00000409286 ZC3H13Q5T200 1668 aaKnown RBP26.53■■□□□ 1.84
LIMS2-204ENST00000409286 ADGRB3O60242 1522 aa26.53■■□□□ 1.84
LIMS2-204ENST00000409286 CAMSAP1Q5T5Y3 1602 aa26.52■■□□□ 1.84
LIMS2-204ENST00000409286 NOS1P29475 1434 aa26.52■■□□□ 1.84
LIMS2-204ENST00000409286 KTN1Q86UP2 1357 aaKnown RBP26.52■■□□□ 1.84
LIMS2-204ENST00000409286 IQGAP1P46940 1657 aa26.51■■□□□ 1.84
LIMS2-204ENST00000409286 NRXN1Q9ULB1 1477 aa26.5■■□□□ 1.83
LIMS2-204ENST00000409286 RPGRIP1LQ68CZ1 1315 aa26.49■■□□□ 1.83
LIMS2-204ENST00000409286 DISP3Q9P2K9 1392 aa26.49■■□□□ 1.83
LIMS2-204ENST00000409286 IFT172Q9UG01 1749 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms