RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 CCDC47Q96A33 483 aaKnown RBP16.96■□□□□ 0.31
AFF3-202ENST00000409236 POGKQ9P215 609 aa16.96■□□□□ 0.31
AFF3-202ENST00000409236 NAT10Q9H0A0 1025 aaKnown RBP16.96■□□□□ 0.31
AFF3-202ENST00000409236 CC2D1BQ5T0F9 858 aaKnown RBP16.96■□□□□ 0.31
AFF3-202ENST00000409236 PLEKHG5O94827 1062 aa16.95■□□□□ 0.3
AFF3-202ENST00000409236 DEF6Q9H4E7 631 aa16.95■□□□□ 0.3
AFF3-202ENST00000409236 KAT6BQ8WYB5 2073 aa16.95■□□□□ 0.3
AFF3-202ENST00000409236 TMF1P82094 1093 aa16.95■□□□□ 0.3
AFF3-202ENST00000409236 PCMTD1Q96MG8 357 aaPredicted RBP16.94■□□□□ 0.3
AFF3-202ENST00000409236 ODF2Q5BJF6 829 aa16.94■□□□□ 0.3
AFF3-202ENST00000409236 CCDC39Q9UFE4 941 aa16.94■□□□□ 0.3
AFF3-202ENST00000409236 GOLGA6L10A6NI86 522 aa16.94■□□□□ 0.3
AFF3-202ENST00000409236 GOLGA3Q08378 1498 aa16.93■□□□□ 0.3
AFF3-202ENST00000409236 SPAG9O60271 1321 aaKnown RBP16.93■□□□□ 0.3
AFF3-202ENST00000409236 PLCD4Q9BRC7 762 aa16.93■□□□□ 0.3
AFF3-202ENST00000409236 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.93■□□□□ 0.3
AFF3-202ENST00000409236 AKAP17AQ02040 695 aaKnown RBP16.92■□□□□ 0.3
AFF3-202ENST00000409236 TIMELESSQ9UNS1 1208 aa16.92■□□□□ 0.3
AFF3-202ENST00000409236 CT47A1Q5JQC4 288 aaPredicted RBP16.92■□□□□ 0.3
AFF3-202ENST00000409236 HMGN5P82970 282 aaKnown RBP16.92■□□□□ 0.3
AFF3-202ENST00000409236 ANKRD18AQ8IVF6 992 aa16.92■□□□□ 0.3
AFF3-202ENST00000409236 IFT57Q9NWB7 429 aa16.92■□□□□ 0.3
AFF3-202ENST00000409236 ZCCHC6Q5VYS8 1495 aaKnown RBP16.91■□□□□ 0.3
AFF3-202ENST00000409236 LRRFIP1Q32MZ4 808 aaKnown RBP16.91■□□□□ 0.3
AFF3-202ENST00000409236 TSPYL1Q9H0U9 437 aa16.91■□□□□ 0.3
AFF3-202ENST00000409236 FAM184AQ8NB25 1140 aa16.91■□□□□ 0.3
AFF3-202ENST00000409236 DHX8Q14562 1220 aaKnown RBP16.91■□□□□ 0.3
AFF3-202ENST00000409236 SCRIBQ14160 1630 aa16.91■□□□□ 0.3
AFF3-202ENST00000409236 EIF3AQ14152 1382 aaKnown RBP16.9■□□□□ 0.3
AFF3-202ENST00000409236 APBB1O00213 710 aa16.9■□□□□ 0.3
AFF3-202ENST00000409236 RRP7BPQ9NSQ0 103 aa16.89■□□□□ 0.29
AFF3-202ENST00000409236 NAP1L1P55209 391 aaKnown RBP16.88■□□□□ 0.29
AFF3-202ENST00000409236 ERLIN2O94905 339 aa16.88■□□□□ 0.29
AFF3-202ENST00000409236 KANK1Q14678 1352 aa16.88■□□□□ 0.29
AFF3-202ENST00000409236 EZRP15311 586 aaKnown RBP16.87■□□□□ 0.29
AFF3-202ENST00000409236 STK31Q9BXU1 1019 aa16.87■□□□□ 0.29
AFF3-202ENST00000409236 HSP90AB2PQ58FF8 381 aa16.86■□□□□ 0.29
AFF3-202ENST00000409236 CGNL1Q0VF96 1302 aa16.86■□□□□ 0.29
AFF3-202ENST00000409236 RALBP1Q15311 655 aa16.86■□□□□ 0.29
AFF3-202ENST00000409236 MORC1Q86VD1 984 aa16.86■□□□□ 0.29
AFF3-202ENST00000409236 TRIM29Q14134 588 aa16.85■□□□□ 0.29
AFF3-202ENST00000409236 EPS15P42566 896 aa16.85■□□□□ 0.29
AFF3-202ENST00000409236 CLASRPQ8N2M8 674 aaKnown RBP16.84■□□□□ 0.29
AFF3-202ENST00000409236 RABEP1Q15276 862 aa16.84■□□□□ 0.29
AFF3-202ENST00000409236 RGL3Q3MIN7 710 aa16.84■□□□□ 0.29
AFF3-202ENST00000409236 REC8O95072 547 aa16.83■□□□□ 0.29
AFF3-202ENST00000409236 SASS6Q6UVJ0 657 aa16.83■□□□□ 0.28
AFF3-202ENST00000409236 GIMAP7Q8NHV1 300 aa16.83■□□□□ 0.28
AFF3-202ENST00000409236 AXDND1Q5T1B0 1012 aaPredicted RBP16.82■□□□□ 0.28
AFF3-202ENST00000409236 CPLX2Q6PUV4 134 aaKnown RBP16.82■□□□□ 0.28
AFF3-202ENST00000409236 EIF3JO75822 258 aaKnown RBP16.82■□□□□ 0.28
AFF3-202ENST00000409236 FAM161AQ3B820 660 aa16.82■□□□□ 0.28
AFF3-202ENST00000409236 SENP3-EIF4A1A0A087X0R7 540 aa16.82■□□□□ 0.28
AFF3-202ENST00000409236 SYNE3Q6ZMZ3 975 aa16.82■□□□□ 0.28
AFF3-202ENST00000409236 CNKSR2Q8WXI2 1034 aa16.82■□□□□ 0.28
AFF3-202ENST00000409236 CT47B1P0C2W7 299 aaPredicted RBP16.82■□□□□ 0.28
AFF3-202ENST00000409236 CAVIN1Q6NZI2 390 aaKnown RBP16.81■□□□□ 0.28
AFF3-202ENST00000409236 LMOD2Q6P5Q4 547 aa16.81■□□□□ 0.28
AFF3-202ENST00000409236 TXLNBQ8N3L3 684 aa16.81■□□□□ 0.28
AFF3-202ENST00000409236 MCTP1Q6DN14 999 aa16.81■□□□□ 0.28
AFF3-202ENST00000409236 CENPQQ7L2Z9 268 aaPredicted RBP16.81■□□□□ 0.28
AFF3-202ENST00000409236 IQCEQ6IPM2 695 aa16.81■□□□□ 0.28
AFF3-202ENST00000409236 LETM1O95202 739 aaPredicted RBP16.81■□□□□ 0.28
AFF3-202ENST00000409236 NASPP49321 788 aaPredicted RBP16.8■□□□□ 0.28
AFF3-202ENST00000409236 NOL8Q76FK4 1167 aaKnown RBP16.8■□□□□ 0.28
AFF3-202ENST00000409236 KIF7Q2M1P5 1343 aa16.8■□□□□ 0.28
AFF3-202ENST00000409236 CHMP3Q9Y3E7 222 aa16.8■□□□□ 0.28
AFF3-202ENST00000409236 SEPT7Q16181 437 aaKnown RBP16.8■□□□□ 0.28
AFF3-202ENST00000409236 RRP9O43818 475 aaKnown RBP16.79■□□□□ 0.28
AFF3-202ENST00000409236 CEP162Q5TB80 1403 aa16.79■□□□□ 0.28
AFF3-202ENST00000409236 FOXD4L1Q9NU39 408 aa16.79■□□□□ 0.28
AFF3-202ENST00000409236 ENOX2Q16206 610 aaKnown RBP16.79■□□□□ 0.28
AFF3-202ENST00000409236 AMOTL1Q8IY63 956 aa16.79■□□□□ 0.28
AFF3-202ENST00000409236 OLFM4Q6UX06 510 aa16.78■□□□□ 0.28
AFF3-202ENST00000409236 SMC4Q9NTJ3 1288 aa16.78■□□□□ 0.28
AFF3-202ENST00000409236 FANCIQ9NVI1 1328 aa16.78■□□□□ 0.28
AFF3-202ENST00000409236 LMOD3Q0VAK6 560 aa16.78■□□□□ 0.28
AFF3-202ENST00000409236 DDX11Q96FC9 970 aa16.77■□□□□ 0.28
AFF3-202ENST00000409236 TSHZ2Q9NRE2 1034 aa16.77■□□□□ 0.28
AFF3-202ENST00000409236 SPATA24Q86W54 205 aa16.77■□□□□ 0.28
AFF3-202ENST00000409236 RUFY2Q8WXA3 655 aa16.77■□□□□ 0.27
AFF3-202ENST00000409236 FOXD4L5Q5VV16 416 aaPredicted RBP16.77■□□□□ 0.27
AFF3-202ENST00000409236 FOXD4L4Q8WXT5 416 aaPredicted RBP16.77■□□□□ 0.27
AFF3-202ENST00000409236 SMARCE1Q969G3 411 aa16.76■□□□□ 0.27
AFF3-202ENST00000409236 PDE3BQ13370 1112 aa16.76■□□□□ 0.27
AFF3-202ENST00000409236 HDGFP51858 240 aaKnown RBP16.76■□□□□ 0.27
AFF3-202ENST00000409236 CCDC43Q96MW1 224 aaKnown RBP16.76■□□□□ 0.27
AFF3-202ENST00000409236 ANO8Q9HCE9 1232 aaPredicted RBP16.76■□□□□ 0.27
AFF3-202ENST00000409236 CENPJQ9HC77 1338 aaPredicted RBP16.76■□□□□ 0.27
AFF3-202ENST00000409236 ERLIN1O75477 346 aa16.76■□□□□ 0.27
AFF3-202ENST00000409236 BICD2Q8TD16 824 aa16.76■□□□□ 0.27
AFF3-202ENST00000409236 TOMM22Q9NS69 142 aa16.75■□□□□ 0.27
AFF3-202ENST00000409236 NUCB2P80303 420 aa16.75■□□□□ 0.27
AFF3-202ENST00000409236 SLC26A8Q96RN1 970 aa16.75■□□□□ 0.27
AFF3-202ENST00000409236 GBP2P32456 591 aaPredicted RBP16.75■□□□□ 0.27
AFF3-202ENST00000409236 ZKSCAN1P17029 563 aaPredicted RBP16.74■□□□□ 0.27
AFF3-202ENST00000409236 LUC7LQ9NQ29 371 aaKnown RBP16.74■□□□□ 0.27
AFF3-202ENST00000409236 G3V3G9 751 aa16.74■□□□□ 0.27
AFF3-202ENST00000409236 MRE11P49959 708 aa16.74■□□□□ 0.27
AFF3-202ENST00000409236 DCAF8Q5TAQ9 597 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms