RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 FGD5Q6ZNL6 1462 aa19.88■□□□□ 0.77
SSFA2-202ENST00000409001 CFAP44Q96MT7 982 aa19.87■□□□□ 0.77
SSFA2-202ENST00000409001 APAF1O14727 1248 aa19.87■□□□□ 0.77
SSFA2-202ENST00000409001 HDGFP51858 240 aaKnown RBP19.87■□□□□ 0.77
SSFA2-202ENST00000409001 FAM161AQ3B820 660 aa19.87■□□□□ 0.77
SSFA2-202ENST00000409001 ARAP1Q96P48 1450 aa19.87■□□□□ 0.77
SSFA2-202ENST00000409001 TERF2IPQ9NYB0 399 aa19.85■□□□□ 0.77
SSFA2-202ENST00000409001 COG6Q9Y2V7 657 aa19.85■□□□□ 0.77
SSFA2-202ENST00000409001 MYOM3Q5VTT5 1437 aa19.85■□□□□ 0.77
SSFA2-202ENST00000409001 USP35Q9P2H5 1018 aa19.84■□□□□ 0.77
SSFA2-202ENST00000409001 GOLGA6L3A6NEY3 463 aa19.84■□□□□ 0.77
SSFA2-202ENST00000409001 FOXD4L1Q9NU39 408 aa19.84■□□□□ 0.77
SSFA2-202ENST00000409001 RAD54L2Q9Y4B4 1467 aa19.84■□□□□ 0.77
SSFA2-202ENST00000409001 WASHC2CQ9Y4E1 1318 aa19.82■□□□□ 0.76
SSFA2-202ENST00000409001 E9PSI1 815 aa19.81■□□□□ 0.76
SSFA2-202ENST00000409001 CNTLNQ9NXG0 1405 aa19.8■□□□□ 0.76
SSFA2-202ENST00000409001 RRBP1Q9P2E9 1410 aaKnown RBP19.8■□□□□ 0.76
SSFA2-202ENST00000409001 ELL2O00472 640 aaPredicted RBP19.79■□□□□ 0.76
SSFA2-202ENST00000409001 KIAA1211Q6ZU35 1233 aa19.79■□□□□ 0.76
SSFA2-202ENST00000409001 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.79■□□□□ 0.76
SSFA2-202ENST00000409001 CGNL1Q0VF96 1302 aa19.77■□□□□ 0.76
SSFA2-202ENST00000409001 SLC4A10Q6U841 1118 aa19.77■□□□□ 0.75
SSFA2-202ENST00000409001 GSE1Q14687 1217 aa19.76■□□□□ 0.75
SSFA2-202ENST00000409001 CDK11BP21127 795 aaKnown RBP19.75■□□□□ 0.75
SSFA2-202ENST00000409001 GAPVD1Q14C86 1478 aa19.75■□□□□ 0.75
SSFA2-202ENST00000409001 PAK3O75914 559 aaPredicted RBP19.75■□□□□ 0.75
SSFA2-202ENST00000409001 STK31Q9BXU1 1019 aa19.75■□□□□ 0.75
SSFA2-202ENST00000409001 PTMSP20962 102 aa19.75■□□□□ 0.75
SSFA2-202ENST00000409001 CHAF1AQ13111 956 aaPredicted RBP19.73■□□□□ 0.75
SSFA2-202ENST00000409001 ZKSCAN2Q63HK3 967 aa19.73■□□□□ 0.75
SSFA2-202ENST00000409001 PTPRGP23470 1445 aa19.72■□□□□ 0.75
SSFA2-202ENST00000409001 SYNJ1O43426 1573 aa19.72■□□□□ 0.75
SSFA2-202ENST00000409001 TRIM6-TRIM34B2RNG4 842 aa19.72■□□□□ 0.75
SSFA2-202ENST00000409001 NCOA2Q15596 1464 aa19.72■□□□□ 0.75
SSFA2-202ENST00000409001 DRC7Q8IY82 874 aa19.72■□□□□ 0.75
SSFA2-202ENST00000409001 NOL8Q76FK4 1167 aaKnown RBP19.72■□□□□ 0.75
SSFA2-202ENST00000409001 NUTM2FA1L443 756 aa19.71■□□□□ 0.75
SSFA2-202ENST00000409001 HMMRO75330 724 aa19.71■□□□□ 0.75
SSFA2-202ENST00000409001 CASKIN1Q8WXD9 1431 aa19.71■□□□□ 0.75
SSFA2-202ENST00000409001 GOLGA6L6A8MZA4 724 aa19.71■□□□□ 0.75
SSFA2-202ENST00000409001 NRDCO43847 1150 aa19.7■□□□□ 0.74
SSFA2-202ENST00000409001 ANKRD45Q5TZF3 282 aa19.7■□□□□ 0.74
SSFA2-202ENST00000409001 CDCA7LQ96GN5 454 aa19.7■□□□□ 0.74
SSFA2-202ENST00000409001 LMOD3Q0VAK6 560 aa19.67■□□□□ 0.74
SSFA2-202ENST00000409001 ARID3AQ99856 593 aa19.67■□□□□ 0.74
SSFA2-202ENST00000409001 CUX1P39880 1505 aa19.67■□□□□ 0.74
SSFA2-202ENST00000409001 NBPF8Q3BBV2 869 aa19.67■□□□□ 0.74
SSFA2-202ENST00000409001 ANKRD50Q9ULJ7 1429 aa19.66■□□□□ 0.74
SSFA2-202ENST00000409001 ERICH3Q5RHP9 1530 aa19.66■□□□□ 0.74
SSFA2-202ENST00000409001 KIAA2012Q0VF49 1180 aa19.66■□□□□ 0.74
SSFA2-202ENST00000409001 CCDC184Q52MB2 194 aa19.66■□□□□ 0.74
SSFA2-202ENST00000409001 ADAMTS8Q9UP79 889 aa19.66■□□□□ 0.74
SSFA2-202ENST00000409001 FOXD4L5Q5VV16 416 aaPredicted RBP19.65■□□□□ 0.74
SSFA2-202ENST00000409001 FOXD4L4Q8WXT5 416 aaPredicted RBP19.65■□□□□ 0.74
SSFA2-202ENST00000409001 PRXQ9BXM0 1461 aa19.65■□□□□ 0.74
SSFA2-202ENST00000409001 SYAP1Q96A49 352 aaPredicted RBP19.64■□□□□ 0.73
SSFA2-202ENST00000409001 EVC2Q86UK5 1308 aa19.64■□□□□ 0.73
SSFA2-202ENST00000409001 VGFO15240 615 aaPredicted RBP19.63■□□□□ 0.73
SSFA2-202ENST00000409001 CFTRP13569 1480 aa19.63■□□□□ 0.73
SSFA2-202ENST00000409001 ST18O60284 1047 aa19.63■□□□□ 0.73
SSFA2-202ENST00000409001 NCAPD3P42695 1498 aa19.63■□□□□ 0.73
SSFA2-202ENST00000409001 MINK1Q8N4C8 1332 aaPredicted RBP19.63■□□□□ 0.73
SSFA2-202ENST00000409001 FYCO1Q9BQS8 1478 aa19.62■□□□□ 0.73
SSFA2-202ENST00000409001 BRD4O60885 1362 aaPredicted RBP19.62■□□□□ 0.73
SSFA2-202ENST00000409001 DDX11L8A8MPP1 907 aa19.62■□□□□ 0.73
SSFA2-202ENST00000409001 DZIP1LQ8IYY4 767 aaKnown RBP19.61■□□□□ 0.73
SSFA2-202ENST00000409001 NGDNQ8NEJ9 315 aaKnown RBP19.61■□□□□ 0.73
SSFA2-202ENST00000409001 LTV1Q96GA3 475 aaPredicted RBP19.61■□□□□ 0.73
SSFA2-202ENST00000409001 AMPHP49418 695 aa19.61■□□□□ 0.73
SSFA2-202ENST00000409001 NGEFQ8N5V2 710 aa19.6■□□□□ 0.73
SSFA2-202ENST00000409001 PANK1Q8TE04 598 aa19.6■□□□□ 0.73
SSFA2-202ENST00000409001 DDX49Q9Y6V7 483 aaKnown RBP19.6■□□□□ 0.73
SSFA2-202ENST00000409001 DDX19BQ9UMR2 479 aa19.59■□□□□ 0.73
SSFA2-202ENST00000409001 AQRO60306 1485 aaKnown RBP eCLIP19.58■□□□□ 0.731e-7■■■□□ 15.2
SSFA2-202ENST00000409001 AKNAQ7Z591 1439 aa19.58■□□□□ 0.73
SSFA2-202ENST00000409001 NBPF1Q3BBV0 1214 aa19.58■□□□□ 0.72
SSFA2-202ENST00000409001 MIA2Q96PC5 1412 aa19.58■□□□□ 0.72
SSFA2-202ENST00000409001 RIPK4P57078 832 aa19.57■□□□□ 0.72
SSFA2-202ENST00000409001 RUNDC1Q96C34 613 aa19.57■□□□□ 0.72
SSFA2-202ENST00000409001 ZNF330Q9Y3S2 320 aaPredicted RBP19.57■□□□□ 0.72
SSFA2-202ENST00000409001 NFKBIBQ15653 356 aa19.57■□□□□ 0.72
SSFA2-202ENST00000409001 NPHP1O15259 732 aa19.56■□□□□ 0.72
SSFA2-202ENST00000409001 WDR97A6NE52 1622 aa19.56■□□□□ 0.72
SSFA2-202ENST00000409001 TULP1O00294 542 aaPredicted RBP19.56■□□□□ 0.72
SSFA2-202ENST00000409001 PNISRQ8TF01 805 aaKnown RBP19.56■□□□□ 0.72
SSFA2-202ENST00000409001 CHMP4AQ9BY43 222 aa19.55■□□□□ 0.72
SSFA2-202ENST00000409001 DIAPH1O60610 1272 aaKnown RBP19.55■□□□□ 0.72
SSFA2-202ENST00000409001 FOXD4L6Q3SYB3 417 aaPredicted RBP19.55■□□□□ 0.72
SSFA2-202ENST00000409001 FOXD4L3Q6VB84 417 aaPredicted RBP19.55■□□□□ 0.72
SSFA2-202ENST00000409001 RILPL2Q969X0 211 aa19.55■□□□□ 0.72
SSFA2-202ENST00000409001 CSB-PGBD3P0DP91 1061 aa19.55■□□□□ 0.72
SSFA2-202ENST00000409001 GNL2Q13823 731 aaKnown RBP19.54■□□□□ 0.72
SSFA2-202ENST00000409001 COG3Q96JB2 828 aa19.54■□□□□ 0.72
SSFA2-202ENST00000409001 HFM1A2PYH4 1435 aa19.53■□□□□ 0.72
SSFA2-202ENST00000409001 LNPKQ9C0E8 428 aa19.53■□□□□ 0.72
SSFA2-202ENST00000409001 TRHP20396 242 aaPredicted RBP19.52■□□□□ 0.72
SSFA2-202ENST00000409001 GPATCH3Q96I76 525 aa19.52■□□□□ 0.72
SSFA2-202ENST00000409001 CHMP3Q9Y3E7 222 aa19.52■□□□□ 0.71
SSFA2-202ENST00000409001 CHMP5Q9NZZ3 219 aa19.51■□□□□ 0.71
SSFA2-202ENST00000409001 PPP2R1AP30153 589 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms