RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 EFCAB2Q5VUJ9 269 aa4.97□□□□□ -1.61
RGPD4-201ENST00000408999 JPH4Q96JJ6 628 aa4.97□□□□□ -1.61
RGPD4-201ENST00000408999 MAPK8IP3Q9UPT6 1336 aa4.97□□□□□ -1.61
RGPD4-201ENST00000408999 CFAP43Q8NDM7 1665 aa4.97□□□□□ -1.61
RGPD4-201ENST00000408999 IGF1RP08069 1367 aa4.96□□□□□ -1.61
RGPD4-201ENST00000408999 MRC2Q9UBG0 1479 aa4.96□□□□□ -1.61
RGPD4-201ENST00000408999 CUX1P39880 1505 aa4.96□□□□□ -1.61
RGPD4-201ENST00000408999 NESP48681 1621 aa4.96□□□□□ -1.61
RGPD4-201ENST00000408999 DMXL1Q9Y485 3027 aa4.96□□□□□ -1.62
RGPD4-201ENST00000408999 TOP2BQ02880 1626 aa4.96□□□□□ -1.62
RGPD4-201ENST00000408999 CFTRP13569 1480 aa4.96□□□□□ -1.62
RGPD4-201ENST00000408999 GTF2E1P29083 439 aaPredicted RBP4.96□□□□□ -1.62
RGPD4-201ENST00000408999 LAS1LQ9Y4W2 734 aaKnown RBP4.96□□□□□ -1.62
RGPD4-201ENST00000408999 SAFB2Q14151 953 aaKnown RBP eCLIP4.95□□□□□ -1.62
RGPD4-201ENST00000408999 PTPRGP23470 1445 aa4.95□□□□□ -1.62
RGPD4-201ENST00000408999 HDGFP51858 240 aaKnown RBP4.95□□□□□ -1.62
RGPD4-201ENST00000408999 SRPK2P78362 688 aaKnown RBP4.95□□□□□ -1.62
RGPD4-201ENST00000408999 NEUROD2Q15784 382 aa4.95□□□□□ -1.62
RGPD4-201ENST00000408999 ERICH3Q5RHP9 1530 aa4.95□□□□□ -1.62
RGPD4-201ENST00000408999 NUDCQ9Y266 331 aa4.95□□□□□ -1.62
RGPD4-201ENST00000408999 EIF3AQ14152 1382 aaKnown RBP4.95□□□□□ -1.62
RGPD4-201ENST00000408999 LMOD2Q6P5Q4 547 aa4.94□□□□□ -1.62
RGPD4-201ENST00000408999 STK26Q9P289 416 aa4.94□□□□□ -1.62
RGPD4-201ENST00000408999 SPAG9O60271 1321 aaKnown RBP4.94□□□□□ -1.62
RGPD4-201ENST00000408999 NFATC2IPQ8NCF5 419 aa4.94□□□□□ -1.62
RGPD4-201ENST00000408999 BICRAQ9NZM4 1560 aa4.94□□□□□ -1.62
RGPD4-201ENST00000408999 KIF3BO15066 747 aa4.94□□□□□ -1.62
RGPD4-201ENST00000408999 FTSJ3Q8IY81 847 aaKnown RBP4.94□□□□□ -1.62
RGPD4-201ENST00000408999 KTN1Q86UP2 1357 aaKnown RBP4.94□□□□□ -1.62
RGPD4-201ENST00000408999 GRIN2BQ13224 1484 aa4.94□□□□□ -1.62
RGPD4-201ENST00000408999 U2SURPO15042 1029 aaKnown RBP4.93□□□□□ -1.62
RGPD4-201ENST00000408999 DMXL2Q8TDJ6 3036 aa4.93□□□□□ -1.62
RGPD4-201ENST00000408999 ZBTB22O15209 634 aa4.93□□□□□ -1.62
RGPD4-201ENST00000408999 DNMBPQ6XZF7 1577 aa4.93□□□□□ -1.62
RGPD4-201ENST00000408999 IFT140Q96RY7 1462 aa4.93□□□□□ -1.62
RGPD4-201ENST00000408999 MORC1Q86VD1 984 aa4.93□□□□□ -1.62
RGPD4-201ENST00000408999 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.93□□□□□ -1.62
RGPD4-201ENST00000408999 TOPBP1Q92547 1522 aa4.93□□□□□ -1.62
RGPD4-201ENST00000408999 SEC24BO95487 1268 aa4.93□□□□□ -1.62
RGPD4-201ENST00000408999 DHX29Q7Z478 1369 aaKnown RBP4.92□□□□□ -1.62
RGPD4-201ENST00000408999 RSPH4AQ5TD94 716 aa4.92□□□□□ -1.62
RGPD4-201ENST00000408999 NUTM2DQ5VT03 806 aaPredicted RBP4.92□□□□□ -1.62
RGPD4-201ENST00000408999 LRRC9Q6ZRR7 1453 aa4.92□□□□□ -1.62
RGPD4-201ENST00000408999 PNNQ9H307 717 aaKnown RBP4.92□□□□□ -1.62
RGPD4-201ENST00000408999 CASKIN1Q8WXD9 1431 aa4.92□□□□□ -1.62
RGPD4-201ENST00000408999 FYCO1Q9BQS8 1478 aa4.91□□□□□ -1.62
RGPD4-201ENST00000408999 CCER2I3L3R5 266 aa4.91□□□□□ -1.62
RGPD4-201ENST00000408999 SOX12O15370 315 aa4.91□□□□□ -1.62
RGPD4-201ENST00000408999 RIPK4P57078 832 aa4.91□□□□□ -1.62
RGPD4-201ENST00000408999 SLC52A1Q9NWF4 448 aa4.91□□□□□ -1.62
RGPD4-201ENST00000408999 NBR1Q14596 966 aa4.91□□□□□ -1.62
RGPD4-201ENST00000408999 HDGFL2Q7Z4V5 671 aaPredicted RBP4.91□□□□□ -1.62
RGPD4-201ENST00000408999 PANK2Q9BZ23 570 aa4.91□□□□□ -1.62
RGPD4-201ENST00000408999 EFCAB5A4FU69 1503 aa4.91□□□□□ -1.62
RGPD4-201ENST00000408999 SNAPC4Q5SXM2 1469 aa4.91□□□□□ -1.62
RGPD4-201ENST00000408999 FRAT1Q92837 279 aaPredicted RBP4.91□□□□□ -1.62
RGPD4-201ENST00000408999 CCDC144AA2RUR9 1427 aa4.91□□□□□ -1.62
RGPD4-201ENST00000408999 FGD6Q6ZV73 1430 aa4.91□□□□□ -1.62
RGPD4-201ENST00000408999 HECW1Q76N89 1606 aa4.91□□□□□ -1.62
RGPD4-201ENST00000408999 L3MBTL2Q969R5 705 aa4.9□□□□□ -1.62
RGPD4-201ENST00000408999 ARXQ96QS3 562 aa4.9□□□□□ -1.62
RGPD4-201ENST00000408999 NCOA2Q15596 1464 aa4.9□□□□□ -1.62
RGPD4-201ENST00000408999 OSCARQ8IYS5 282 aa4.9□□□□□ -1.62
RGPD4-201ENST00000408999 ANP32BQ92688 251 aaKnown RBP4.9□□□□□ -1.62
RGPD4-201ENST00000408999 POLA1P09884 1462 aaPredicted RBP4.9□□□□□ -1.62
RGPD4-201ENST00000408999 LAMC3Q9Y6N6 1575 aa4.9□□□□□ -1.63
RGPD4-201ENST00000408999 CUL7Q14999 1698 aa4.9□□□□□ -1.63
RGPD4-201ENST00000408999 POLR1AO95602 1720 aaPredicted RBP4.9□□□□□ -1.63
RGPD4-201ENST00000408999 ARHGAP5Q13017 1502 aa4.9□□□□□ -1.63
RGPD4-201ENST00000408999 DDRGK1Q96HY6 314 aa4.9□□□□□ -1.63
RGPD4-201ENST00000408999 B4GALNT3Q6L9W6 998 aa4.9□□□□□ -1.63
RGPD4-201ENST00000408999 EHBP1L1Q8N3D4 1523 aa4.89□□□□□ -1.63
RGPD4-201ENST00000408999 MAGI3Q5TCQ9 1506 aa4.89□□□□□ -1.63
RGPD4-201ENST00000408999 UACAQ9BZF9 1416 aa4.89□□□□□ -1.63
RGPD4-201ENST00000408999 RRBP1Q9P2E9 1410 aaKnown RBP4.89□□□□□ -1.63
RGPD4-201ENST00000408999 KALRNO60229 2985 aa4.89□□□□□ -1.63
RGPD4-201ENST00000408999 PHLDB1Q86UU1 1377 aa4.89□□□□□ -1.63
RGPD4-201ENST00000408999 ZNF608Q9ULD9 1512 aaPredicted RBP4.89□□□□□ -1.63
RGPD4-201ENST00000408999 CASC1Q6TDU7 716 aa4.89□□□□□ -1.63
RGPD4-201ENST00000408999 E9PCH4 1651 aa4.89□□□□□ -1.63
RGPD4-201ENST00000408999 RALBP1Q15311 655 aa4.89□□□□□ -1.63
RGPD4-201ENST00000408999 ANTXR1Q9H6X2 564 aa4.89□□□□□ -1.63
RGPD4-201ENST00000408999 FAM163AQ96GL9 167 aaPredicted RBP4.89□□□□□ -1.63
RGPD4-201ENST00000408999 PPP4R2Q9NY27 417 aa4.89□□□□□ -1.63
RGPD4-201ENST00000408999 KCNG1Q9UIX4 513 aa4.89□□□□□ -1.63
RGPD4-201ENST00000408999 ASH1LQ9NR48 2969 aaKnown RBP4.88□□□□□ -1.63
RGPD4-201ENST00000408999 PRG4Q92954 1404 aaPredicted RBP4.88□□□□□ -1.63
RGPD4-201ENST00000408999 BECN1Q14457 450 aa4.88□□□□□ -1.63
RGPD4-201ENST00000408999 CYB5RLQ6IPT4 315 aa4.88□□□□□ -1.63
RGPD4-201ENST00000408999 FGD1P98174 961 aa4.88□□□□□ -1.63
RGPD4-201ENST00000408999 ZNF830Q96NB3 372 aaPredicted RBP4.88□□□□□ -1.63
RGPD4-201ENST00000408999 SYNJ2O15056 1496 aa4.88□□□□□ -1.63
RGPD4-201ENST00000408999 MGAQ8IWI9 3026 aa4.88□□□□□ -1.63
RGPD4-201ENST00000408999 CHD7Q9P2D1 2997 aa4.87□□□□□ -1.63
RGPD4-201ENST00000408999 TUBGCP6Q96RT7 1819 aa4.87□□□□□ -1.63
RGPD4-201ENST00000408999 PKNOX2Q96KN3 472 aa4.87□□□□□ -1.63
RGPD4-201ENST00000408999 TMEM51Q9NW97 253 aa4.87□□□□□ -1.63
RGPD4-201ENST00000408999 EID1Q9Y6B2 187 aa4.87□□□□□ -1.63
RGPD4-201ENST00000408999 BIVM-ERCC5R4GMW8 1640 aa4.87□□□□□ -1.63
RGPD4-201ENST00000408999 ZNF644Q9H582 1327 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms