RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 LAPTM4BQ86VI4 370 aa8.42□□□□□ -1.06
MIR548I3-201ENST00000408378 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.4□□□□□ -1.06
MIR548I3-201ENST00000408378 TSR3Q9UJK0 312 aaKnown RBP8.4□□□□□ -1.06
MIR548I3-201ENST00000408378 PPP1R18Q6NYC8 613 aa8.39□□□□□ -1.07
MIR548I3-201ENST00000408378 PPP1R15BQ5SWA1 713 aa8.38□□□□□ -1.07
MIR548I3-201ENST00000408378 LRCH3Q96II8 777 aa8.38□□□□□ -1.07
MIR548I3-201ENST00000408378 ANO8Q9HCE9 1232 aaPredicted RBP8.38□□□□□ -1.07
MIR548I3-201ENST00000408378 V9GY48 417 aaPredicted RBP8.38□□□□□ -1.07
MIR548I3-201ENST00000408378 RGL2O15211 777 aa8.36□□□□□ -1.07
MIR548I3-201ENST00000408378 POTECB2RU33 542 aa8.35□□□□□ -1.07
MIR548I3-201ENST00000408378 PCDHGA10Q9Y5H3 936 aa8.34□□□□□ -1.07
MIR548I3-201ENST00000408378 TJAP1Q5JTD0 557 aa8.33□□□□□ -1.08
MIR548I3-201ENST00000408378 PPP4CP60510 307 aa8.32□□□□□ -1.08
MIR548I3-201ENST00000408378 FAM98CQ17RN3 349 aaKnown RBP8.32□□□□□ -1.08
MIR548I3-201ENST00000408378 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.32□□□□□ -1.08
MIR548I3-201ENST00000408378 MAP3K9P80192 1104 aa8.31□□□□□ -1.08
MIR548I3-201ENST00000408378 MTRQ99707 1265 aa8.3□□□□□ -1.08
MIR548I3-201ENST00000408378 PKDCCQ504Y2 493 aa8.29□□□□□ -1.08
MIR548I3-201ENST00000408378 CRISPLD2Q9H0B8 497 aa8.29□□□□□ -1.08
MIR548I3-201ENST00000408378 TREML4Q6UXN2 200 aa8.28□□□□□ -1.08
MIR548I3-201ENST00000408378 ZNF516Q92618 1163 aa8.28□□□□□ -1.08
MIR548I3-201ENST00000408378 IL21Q9HBE4 155 aa8.28□□□□□ -1.08
MIR548I3-201ENST00000408378 TRIM6-TRIM34B2RNG4 842 aa8.27□□□□□ -1.09
MIR548I3-201ENST00000408378 MYT1Q01538 1121 aa8.27□□□□□ -1.09
MIR548I3-201ENST00000408378 TYW1BQ6NUM6 668 aa8.27□□□□□ -1.09
MIR548I3-201ENST00000408378 FBXW7Q969H0 707 aa8.25□□□□□ -1.09
MIR548I3-201ENST00000408378 ONECUT3O60422 494 aaPredicted RBP8.24□□□□□ -1.09
MIR548I3-201ENST00000408378 NKX2-3Q8TAU0 364 aa8.24□□□□□ -1.09
MIR548I3-201ENST00000408378 C6orf132Q5T0Z8 1188 aa8.22□□□□□ -1.09
MIR548I3-201ENST00000408378 NCKAP5LQ9HCH0 1330 aa8.22□□□□□ -1.09
MIR548I3-201ENST00000408378 PHF14O94880 888 aa8.21□□□□□ -1.1
MIR548I3-201ENST00000408378 LCE2AQ5TA79 106 aaPredicted RBP8.21□□□□□ -1.1
MIR548I3-201ENST00000408378 TRIM67Q6ZTA4 783 aa8.21□□□□□ -1.1
MIR548I3-201ENST00000408378 SAMD7Q7Z3H4 446 aa8.21□□□□□ -1.1
MIR548I3-201ENST00000408378 RBM33Q96EV2 1170 aaKnown RBP8.21□□□□□ -1.1
MIR548I3-201ENST00000408378 PDE4AP27815 886 aa8.2□□□□□ -1.1
MIR548I3-201ENST00000408378 FAM187AA6NFU0 413 aa8.19□□□□□ -1.1
MIR548I3-201ENST00000408378 RNF40O75150 1001 aa8.19□□□□□ -1.1
MIR548I3-201ENST00000408378 GGCXP38435 758 aa8.19□□□□□ -1.1
MIR548I3-201ENST00000408378 SMAPO00193 183 aa8.18□□□□□ -1.1
MIR548I3-201ENST00000408378 DGAT1O75907 488 aa8.18□□□□□ -1.1
MIR548I3-201ENST00000408378 LARP6Q9BRS8 491 aaKnown RBP8.18□□□□□ -1.1
MIR548I3-201ENST00000408378 STK17AQ9UEE5 414 aa8.18□□□□□ -1.1
MIR548I3-201ENST00000408378 ST8SIA5O15466 376 aa8.17□□□□□ -1.1
MIR548I3-201ENST00000408378 PKD2Q13563 968 aa8.17□□□□□ -1.1
MIR548I3-201ENST00000408378 EMILIN3Q9NT22 766 aa8.17□□□□□ -1.1
MIR548I3-201ENST00000408378 LOC100996750A0A140TA64 210 aa8.16□□□□□ -1.1
MIR548I3-201ENST00000408378 COPS2P61201 443 aa8.16□□□□□ -1.1
MIR548I3-201ENST00000408378 DDX27Q96GQ7 796 aaKnown RBP8.16□□□□□ -1.1
MIR548I3-201ENST00000408378 KRTAP4-6Q9BYQ5 205 aa8.16□□□□□ -1.1
MIR548I3-201ENST00000408378 TSKSQ9UJT2 592 aa8.16□□□□□ -1.1
MIR548I3-201ENST00000408378 WFS1O76024 890 aa8.15□□□□□ -1.1
MIR548I3-201ENST00000408378 PACS2Q86VP3 889 aa8.15□□□□□ -1.1
MIR548I3-201ENST00000408378 SLC19A1P41440 591 aa8.14□□□□□ -1.11
MIR548I3-201ENST00000408378 APLP1P51693 650 aa8.13□□□□□ -1.11
MIR548I3-201ENST00000408378 TNFRSF10AO00220 468 aa8.12□□□□□ -1.11
MIR548I3-201ENST00000408378 HS6ST3Q8IZP7 471 aa8.12□□□□□ -1.11
MIR548I3-201ENST00000408378 EPAS1Q99814 870 aa8.12□□□□□ -1.11
MIR548I3-201ENST00000408378 AAASQ9NRG9 546 aa8.1□□□□□ -1.11
MIR548I3-201ENST00000408378 INSM1Q01101 510 aaPredicted RBP8.09□□□□□ -1.11
MIR548I3-201ENST00000408378 EMID1Q96A84 441 aaPredicted RBP8.09□□□□□ -1.11
MIR548I3-201ENST00000408378 CHGAP10645 457 aaKnown RBP8.08□□□□□ -1.12
MIR548I3-201ENST00000408378 SPRYD7Q5W111 196 aa8.08□□□□□ -1.12
MIR548I3-201ENST00000408378 DDX12PQ92771 950 aa8.08□□□□□ -1.12
MIR548I3-201ENST00000408378 TMUB1Q9BVT8 246 aa8.08□□□□□ -1.12
MIR548I3-201ENST00000408378 RNF223E7ERA6 249 aa8.07□□□□□ -1.12
MIR548I3-201ENST00000408378 NKX1-1Q15270 411 aaPredicted RBP8.07□□□□□ -1.12
MIR548I3-201ENST00000408378 TSR1Q2NL82 804 aaKnown RBP8.07□□□□□ -1.12
MIR548I3-201ENST00000408378 ZNF697Q5TEC3 545 aa8.07□□□□□ -1.12
MIR548I3-201ENST00000408378 ZNF598Q86UK7 904 aaKnown RBP8.07□□□□□ -1.12
MIR548I3-201ENST00000408378 PRR20EP86478 221 aa8.06□□□□□ -1.12
MIR548I3-201ENST00000408378 PRR20CP86479 221 aa8.06□□□□□ -1.12
MIR548I3-201ENST00000408378 PRR20DP86480 221 aa8.06□□□□□ -1.12
MIR548I3-201ENST00000408378 PRR20BP86481 221 aa8.06□□□□□ -1.12
MIR548I3-201ENST00000408378 PRR20AP86496 221 aa8.06□□□□□ -1.12
MIR548I3-201ENST00000408378 C3orf80F5H4A9 247 aa8.05□□□□□ -1.12
MIR548I3-201ENST00000408378 MAP3K7O43318 606 aa8.05□□□□□ -1.12
MIR548I3-201ENST00000408378 DACH1Q9UI36 760 aa8.05□□□□□ -1.12
MIR548I3-201ENST00000408378 PNMA3Q9UL41 463 aa8.05□□□□□ -1.12
MIR548I3-201ENST00000408378 C11orf95C9JLR9 678 aaPredicted RBP8.03□□□□□ -1.12
MIR548I3-201ENST00000408378 PPEF1O14829 653 aaPredicted RBP8.03□□□□□ -1.12
MIR548I3-201ENST00000408378 ZPR1O75312 459 aa8.03□□□□□ -1.12
MIR548I3-201ENST00000408378 NFX1Q12986 1120 aaKnown RBP8.03□□□□□ -1.12
MIR548I3-201ENST00000408378 CDCA7LQ96GN5 454 aa8.03□□□□□ -1.12
MIR548I3-201ENST00000408378 FAM198AQ9UFP1 575 aa8.03□□□□□ -1.12
MIR548I3-201ENST00000408378 WIPF1O43516 503 aa8.02□□□□□ -1.13
MIR548I3-201ENST00000408378 HDGFP51858 240 aaKnown RBP8.02□□□□□ -1.13
MIR548I3-201ENST00000408378 NBR1Q14596 966 aa8.02□□□□□ -1.13
MIR548I3-201ENST00000408378 MFSD10Q14728 455 aa8.02□□□□□ -1.13
MIR548I3-201ENST00000408378 GMPR2Q9P2T1 348 aaKnown RBP8.02□□□□□ -1.13
MIR548I3-201ENST00000408378 DPYSL4O14531 572 aa8.01□□□□□ -1.13
MIR548I3-201ENST00000408378 GDF9O60383 454 aa8.01□□□□□ -1.13
MIR548I3-201ENST00000408378 LIAT1Q6ZQX7 453 aa8.01□□□□□ -1.13
MIR548I3-201ENST00000408378 TATDN2Q93075 761 aa8.01□□□□□ -1.13
MIR548I3-201ENST00000408378 RYDENQ9NUL5 291 aaKnown RBP8.01□□□□□ -1.13
MIR548I3-201ENST00000408378 NBPF26B4DH59 902 aa8□□□□□ -1.13
MIR548I3-201ENST00000408378 TLL1O43897 1013 aa7.99□□□□□ -1.13
MIR548I3-201ENST00000408378 EN1Q05925 392 aaPredicted RBP7.99□□□□□ -1.13
MIR548I3-201ENST00000408378 PRSS12P56730 875 aa7.98□□□□□ -1.13
MIR548I3-201ENST00000408378 FOXC1Q12948 553 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms