RNA–Protein interactions for RNA: ENST00000407925.5

LTBP1-204, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-204ENST00000407925 CHMP3Q9Y3E7 222 aa13.3□□□□□ -0.28
LTBP1-204ENST00000407925 PDS5BQ9NTI5 1447 aa13.3□□□□□ -0.28
LTBP1-204ENST00000407925 UACAQ9BZF9 1416 aa13.3□□□□□ -0.28
LTBP1-204ENST00000407925 TPM2P07951 284 aa13.29□□□□□ -0.28
LTBP1-204ENST00000407925 TPM1P09493 284 aa13.29□□□□□ -0.28
LTBP1-204ENST00000407925 MYO15BQ96JP2 1530 aa13.29□□□□□ -0.28
LTBP1-204ENST00000407925 MARCH6O60337 910 aa13.29□□□□□ -0.28
LTBP1-204ENST00000407925 CPLX2Q6PUV4 134 aaKnown RBP13.29□□□□□ -0.28
LTBP1-204ENST00000407925 CCDC70Q6NSX1 233 aa13.28□□□□□ -0.28
LTBP1-204ENST00000407925 AMPHP49418 695 aa13.28□□□□□ -0.28
LTBP1-204ENST00000407925 NGDNQ8NEJ9 315 aaKnown RBP13.28□□□□□ -0.28
LTBP1-204ENST00000407925 GPS2Q13227 327 aa13.27□□□□□ -0.29
LTBP1-204ENST00000407925 KIF15Q9NS87 1388 aa13.27□□□□□ -0.29
LTBP1-204ENST00000407925 GZF1Q9H116 711 aaPredicted RBP13.27□□□□□ -0.29
LTBP1-204ENST00000407925 AKAP17AQ02040 695 aaKnown RBP13.26□□□□□ -0.29
LTBP1-204ENST00000407925 GTF2E1P29083 439 aaPredicted RBP13.26□□□□□ -0.29
LTBP1-204ENST00000407925 RAB3GAP2Q9H2M9 1393 aa13.25□□□□□ -0.29
LTBP1-204ENST00000407925 CENPQQ7L2Z9 268 aaPredicted RBP13.25□□□□□ -0.29
LTBP1-204ENST00000407925 FRAT2O75474 233 aaPredicted RBP13.25□□□□□ -0.29
LTBP1-204ENST00000407925 SETQ01105 290 aaPredicted RBP13.25□□□□□ -0.29
LTBP1-204ENST00000407925 PRM3Q9NNZ6 103 aa13.25□□□□□ -0.29
LTBP1-204ENST00000407925 RUFY2Q8WXA3 655 aa13.25□□□□□ -0.29
LTBP1-204ENST00000407925 CCDC18Q5T9S5 1454 aa13.25□□□□□ -0.29
LTBP1-204ENST00000407925 SLC4A10Q6U841 1118 aa13.24□□□□□ -0.29
LTBP1-204ENST00000407925 SYNE3Q6ZMZ3 975 aa13.24□□□□□ -0.29
LTBP1-204ENST00000407925 TPD52L1Q16890 204 aaPredicted RBP13.24□□□□□ -0.29
LTBP1-204ENST00000407925 CCDC47Q96A33 483 aaKnown RBP13.24□□□□□ -0.29
LTBP1-204ENST00000407925 GOLGA6L19H0YKK7 550 aa13.24□□□□□ -0.29
LTBP1-204ENST00000407925 H3BQV1 296 aa13.24□□□□□ -0.29
LTBP1-204ENST00000407925 KIF3BO15066 747 aa13.24□□□□□ -0.29
LTBP1-204ENST00000407925 IFFO2Q5TF58 517 aa13.24□□□□□ -0.29
LTBP1-204ENST00000407925 TOMM22Q9NS69 142 aa13.24□□□□□ -0.29
LTBP1-204ENST00000407925 FAM184AQ8NB25 1140 aa13.23□□□□□ -0.29
LTBP1-204ENST00000407925 AMOTL1Q8IY63 956 aa13.23□□□□□ -0.29
LTBP1-204ENST00000407925 CGNL1Q0VF96 1302 aa13.23□□□□□ -0.29
LTBP1-204ENST00000407925 MYBBP1AQ9BQG0 1328 aaKnown RBP13.23□□□□□ -0.29
LTBP1-204ENST00000407925 CCDC9Q9Y3X0 531 aaKnown RBP13.22□□□□□ -0.29
LTBP1-204ENST00000407925 ANKRD20A12PQ8NF67 263 aa13.22□□□□□ -0.29
LTBP1-204ENST00000407925 BECN2A8MW95 431 aa13.21□□□□□ -0.29
LTBP1-204ENST00000407925 E9PSI1 815 aa13.21□□□□□ -0.29
LTBP1-204ENST00000407925 IPO7O95373 1038 aaKnown RBP13.21□□□□□ -0.29
LTBP1-204ENST00000407925 WASHC2CQ9Y4E1 1318 aa13.21□□□□□ -0.29
LTBP1-204ENST00000407925 REC8O95072 547 aa13.21□□□□□ -0.3
LTBP1-204ENST00000407925 NEXNQ0ZGT2 675 aa13.2□□□□□ -0.3
LTBP1-204ENST00000407925 HOOK1Q9UJC3 728 aaKnown RBP13.2□□□□□ -0.3
LTBP1-204ENST00000407925 NOL10Q9BSC4 688 aaKnown RBP13.2□□□□□ -0.3
LTBP1-204ENST00000407925 ZKSCAN2Q63HK3 967 aa13.2□□□□□ -0.3
LTBP1-204ENST00000407925 SOGA1O94964 1423 aa13.2□□□□□ -0.3
LTBP1-204ENST00000407925 ROCK1Q13464 1354 aa13.2□□□□□ -0.3
LTBP1-204ENST00000407925 WWC1Q8IX03 1113 aa13.2□□□□□ -0.3
LTBP1-204ENST00000407925 FAM161AQ3B820 660 aa13.19□□□□□ -0.3
LTBP1-204ENST00000407925 ZKSCAN1P17029 563 aaPredicted RBP13.19□□□□□ -0.3
LTBP1-204ENST00000407925 AAMPQ13685 434 aa13.19□□□□□ -0.3
LTBP1-204ENST00000407925 C1orf141Q5JVX7 400 aa13.19□□□□□ -0.3
LTBP1-204ENST00000407925 ANO8Q9HCE9 1232 aaPredicted RBP13.19□□□□□ -0.3
LTBP1-204ENST00000407925 SMARCA2P51531 1590 aa13.19□□□□□ -0.3
LTBP1-204ENST00000407925 VGFO15240 615 aaPredicted RBP13.18□□□□□ -0.3
LTBP1-204ENST00000407925 TRIM29Q14134 588 aa13.18□□□□□ -0.3
LTBP1-204ENST00000407925 VPS53Q5VIR6 699 aa13.18□□□□□ -0.3
LTBP1-204ENST00000407925 L3MBTL2Q969R5 705 aa13.18□□□□□ -0.3
LTBP1-204ENST00000407925 STAC3Q96MF2 364 aa13.18□□□□□ -0.3
LTBP1-204ENST00000407925 CLUAP1Q96AJ1 413 aa13.17□□□□□ -0.3
LTBP1-204ENST00000407925 COG3Q96JB2 828 aa13.17□□□□□ -0.3
LTBP1-204ENST00000407925 DIAPH3Q9NSV4 1193 aa13.17□□□□□ -0.3
LTBP1-204ENST00000407925 CREBRFQ8IUR6 639 aa13.17□□□□□ -0.3
LTBP1-204ENST00000407925 EVC2Q86UK5 1308 aa13.17□□□□□ -0.3
LTBP1-204ENST00000407925 RSPH6AQ9H0K4 717 aa13.17□□□□□ -0.3
LTBP1-204ENST00000407925 DDX49Q9Y6V7 483 aaKnown RBP13.17□□□□□ -0.3
LTBP1-204ENST00000407925 RNF20Q5VTR2 975 aa13.16□□□□□ -0.3
LTBP1-204ENST00000407925 API5Q9BZZ5 524 aaKnown RBP13.16□□□□□ -0.3
LTBP1-204ENST00000407925 CCDC144AA2RUR9 1427 aa13.16□□□□□ -0.3
LTBP1-204ENST00000407925 TEFQ10587 303 aa13.16□□□□□ -0.3
LTBP1-204ENST00000407925 PES1O00541 588 aaKnown RBP13.15□□□□□ -0.3
LTBP1-204ENST00000407925 DDX19BQ9UMR2 479 aa13.15□□□□□ -0.3
LTBP1-204ENST00000407925 DDX58O95786 925 aaKnown RBP13.15□□□□□ -0.3
LTBP1-204ENST00000407925 FOXD1Q16676 465 aa13.15□□□□□ -0.3
LTBP1-204ENST00000407925 HSP90AB4PQ58FF6 505 aa13.15□□□□□ -0.3
LTBP1-204ENST00000407925 CDR1P51861 262 aa13.14□□□□□ -0.31
LTBP1-204ENST00000407925 TCEAL9Q9UHQ7 104 aa13.14□□□□□ -0.31
LTBP1-204ENST00000407925 KANK4Q5T7N3 995 aaPredicted RBP13.13□□□□□ -0.31
LTBP1-204ENST00000407925 TTC5Q8N0Z6 440 aa13.13□□□□□ -0.31
LTBP1-204ENST00000407925 RILPL2Q969X0 211 aa13.13□□□□□ -0.31
LTBP1-204ENST00000407925 TRIM34Q9BYJ4 488 aa13.13□□□□□ -0.31
LTBP1-204ENST00000407925 TRDNQ13061 729 aa13.12□□□□□ -0.31
LTBP1-204ENST00000407925 NOL8Q76FK4 1167 aaKnown RBP13.12□□□□□ -0.31
LTBP1-204ENST00000407925 ANKRD45Q5TZF3 282 aa13.12□□□□□ -0.31
LTBP1-204ENST00000407925 CCDC146Q8IYE0 955 aa13.12□□□□□ -0.31
LTBP1-204ENST00000407925 CTDP1Q9Y5B0 961 aaPredicted RBP13.12□□□□□ -0.31
LTBP1-204ENST00000407925 RAPGEF2Q9Y4G8 1499 aa13.12□□□□□ -0.31
LTBP1-204ENST00000407925 CPLX1O14810 134 aa13.12□□□□□ -0.31
LTBP1-204ENST00000407925 TEX35Q5T0J7 233 aa13.11□□□□□ -0.31
LTBP1-204ENST00000407925 HSP90AA2PQ14568 343 aaPredicted RBP13.1□□□□□ -0.31
LTBP1-204ENST00000407925 ACBD3Q9H3P7 528 aa13.1□□□□□ -0.31
LTBP1-204ENST00000407925 ZBED9Q6R2W3 1325 aa13.1□□□□□ -0.31
LTBP1-204ENST00000407925 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.1□□□□□ -0.31
LTBP1-204ENST00000407925 C9orf78Q9NZ63 289 aaPredicted RBP13.1□□□□□ -0.31
LTBP1-204ENST00000407925 NUCB2P80303 420 aa13.09□□□□□ -0.31
LTBP1-204ENST00000407925 IFIT2P09913 472 aaKnown RBP13.09□□□□□ -0.31
LTBP1-204ENST00000407925 HNRNPMP52272 730 aaKnown RBP eCLIP13.09□□□□□ -0.31
LTBP1-204ENST00000407925 LTV1Q96GA3 475 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms