RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 RRP7BPQ9NSQ0 103 aa29.03■■■□□ 2.24
CUEDC1-202ENST00000407144 RIMBP3CA6NJZ7 1639 aa29.03■■■□□ 2.24
CUEDC1-202ENST00000407144 RIMBP3BA6NNM3 1639 aa29.03■■■□□ 2.24
CUEDC1-202ENST00000407144 RIMBP3Q9UFD9 1639 aa29.03■■■□□ 2.24
CUEDC1-202ENST00000407144 EHBP1L1Q8N3D4 1523 aa29.02■■■□□ 2.24
CUEDC1-202ENST00000407144 SKAP1Q86WV1 359 aa29.02■■■□□ 2.24
CUEDC1-202ENST00000407144 INSRP06213 1382 aa29.02■■■□□ 2.24
CUEDC1-202ENST00000407144 UGGT2Q9NYU1 1516 aa29.01■■■□□ 2.23
CUEDC1-202ENST00000407144 ERCC6L2Q5T890 1561 aa29■■■□□ 2.23
CUEDC1-202ENST00000407144 KIAA0586Q9BVV6 1533 aa29■■■□□ 2.23
CUEDC1-202ENST00000407144 CENPJQ9HC77 1338 aaPredicted RBP28.99■■■□□ 2.23
CUEDC1-202ENST00000407144 SENP3-EIF4A1A0A087X0R7 540 aa28.99■■■□□ 2.23
CUEDC1-202ENST00000407144 SHROOM2Q13796 1616 aa28.99■■■□□ 2.23
CUEDC1-202ENST00000407144 USP47Q96K76 1375 aa28.98■■■□□ 2.23
CUEDC1-202ENST00000407144 ZMYM4Q5VZL5 1548 aa28.98■■■□□ 2.23
CUEDC1-202ENST00000407144 MBD5Q9P267 1494 aa28.96■■■□□ 2.23
CUEDC1-202ENST00000407144 FSD2A1L4K1 749 aa28.96■■■□□ 2.23
CUEDC1-202ENST00000407144 KDM5CP41229 1560 aa28.96■■■□□ 2.23
CUEDC1-202ENST00000407144 CTTNBP2Q8WZ74 1663 aa28.96■■■□□ 2.23
CUEDC1-202ENST00000407144 JPH4Q96JJ6 628 aa28.94■■■□□ 2.22
CUEDC1-202ENST00000407144 IQGAP2Q13576 1575 aa28.93■■■□□ 2.22
CUEDC1-202ENST00000407144 XRCC6P12956 609 aaKnown RBP eCLIP28.93■■■□□ 2.22
CUEDC1-202ENST00000407144 PLIN1O60240 522 aa28.92■■■□□ 2.22
CUEDC1-202ENST00000407144 CNGB1Q14028 1251 aaPredicted RBP28.92■■■□□ 2.22
CUEDC1-202ENST00000407144 LRRIQ1Q96JM4 1722 aa28.91■■■□□ 2.22
CUEDC1-202ENST00000407144 GOLGA6L3A6NEY3 463 aa28.91■■■□□ 2.22
CUEDC1-202ENST00000407144 VIRMAQ69YN4 1812 aaKnown RBP28.9■■■□□ 2.22
CUEDC1-202ENST00000407144 KIF14Q15058 1648 aa28.89■■■□□ 2.22
CUEDC1-202ENST00000407144 PLEKHH2Q8IVE3 1493 aa28.89■■■□□ 2.22
CUEDC1-202ENST00000407144 BECN1Q14457 450 aa28.89■■■□□ 2.22
CUEDC1-202ENST00000407144 PRG4Q92954 1404 aaPredicted RBP28.88■■■□□ 2.21
CUEDC1-202ENST00000407144 FOXD1Q16676 465 aa28.87■■■□□ 2.21
CUEDC1-202ENST00000407144 PDCL3Q9H2J4 239 aa28.86■■■□□ 2.21
CUEDC1-202ENST00000407144 PLEKHG5O94827 1062 aa28.86■■■□□ 2.21
CUEDC1-202ENST00000407144 TPM2P07951 284 aa28.86■■■□□ 2.21
CUEDC1-202ENST00000407144 CDCA7LQ96GN5 454 aa28.86■■■□□ 2.21
CUEDC1-202ENST00000407144 NLRP13Q86W25 1043 aa28.85■■■□□ 2.21
CUEDC1-202ENST00000407144 CHIC2Q9UKJ5 165 aa28.85■■■□□ 2.21
CUEDC1-202ENST00000407144 E9PCH4 1651 aa28.84■■■□□ 2.21
CUEDC1-202ENST00000407144 POLR3GLQ9BT43 218 aa28.84■■■□□ 2.21
CUEDC1-202ENST00000407144 USP19O94966 1318 aa28.82■■■□□ 2.2
CUEDC1-202ENST00000407144 CALD1Q05682 793 aaKnown RBP28.82■■■□□ 2.2
CUEDC1-202ENST00000407144 BLMP54132 1417 aaPredicted RBP28.82■■■□□ 2.2
CUEDC1-202ENST00000407144 ANTXR1Q9H6X2 564 aa28.81■■■□□ 2.2
CUEDC1-202ENST00000407144 ROCK1Q13464 1354 aa28.8■■■□□ 2.2
CUEDC1-202ENST00000407144 PARD3Q8TEW0 1356 aa28.78■■■□□ 2.2
CUEDC1-202ENST00000407144 MRE11P49959 708 aa28.77■■■□□ 2.2
CUEDC1-202ENST00000407144 CYB5RLQ6IPT4 315 aa28.77■■■□□ 2.2
CUEDC1-202ENST00000407144 C20orf194Q5TEA3 1177 aa28.76■■■□□ 2.19
CUEDC1-202ENST00000407144 SAMD9Q5K651 1589 aa28.75■■■□□ 2.19
CUEDC1-202ENST00000407144 DISP1Q96F81 1524 aa28.75■■■□□ 2.19
CUEDC1-202ENST00000407144 ISY1Q9ULR0 285 aaKnown RBP28.75■■■□□ 2.19
CUEDC1-202ENST00000407144 ESPNB1AK53 854 aa28.74■■■□□ 2.19
CUEDC1-202ENST00000407144 UHRF1BP1Q6BDS2 1440 aa28.73■■■□□ 2.19
CUEDC1-202ENST00000407144 RALGAPBQ86X10 1494 aa28.73■■■□□ 2.19
CUEDC1-202ENST00000407144 PANK2Q9BZ23 570 aa28.71■■■□□ 2.19
CUEDC1-202ENST00000407144 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.69■■■□□ 2.18
CUEDC1-202ENST00000407144 KIAA0556O60303 1618 aa28.68■■■□□ 2.18
CUEDC1-202ENST00000407144 RGS3P49796 1198 aa28.68■■■□□ 2.18
CUEDC1-202ENST00000407144 SLC4A1APQ9BWU0 796 aaKnown RBP28.68■■■□□ 2.18
CUEDC1-202ENST00000407144 PRDM4Q9UKN5 801 aa28.68■■■□□ 2.18
CUEDC1-202ENST00000407144 MAGI3Q5TCQ9 1506 aa28.68■■■□□ 2.18
CUEDC1-202ENST00000407144 SLKQ9H2G2 1235 aaPredicted RBP28.67■■■□□ 2.18
CUEDC1-202ENST00000407144 MYH16Q9H6N6 1097 aa28.65■■■□□ 2.18
CUEDC1-202ENST00000407144 NLRP1Q9C000 1473 aa28.65■■■□□ 2.18
CUEDC1-202ENST00000407144 MCM4P33991 863 aa28.65■■■□□ 2.18
CUEDC1-202ENST00000407144 CARMIL2Q6F5E8 1435 aa28.63■■■□□ 2.17
CUEDC1-202ENST00000407144 EIF3AQ14152 1382 aaKnown RBP28.62■■■□□ 2.17
CUEDC1-202ENST00000407144 PZPP20742 1482 aa28.59■■■□□ 2.17
CUEDC1-202ENST00000407144 MAPK8IP3Q9UPT6 1336 aa28.59■■■□□ 2.17
CUEDC1-202ENST00000407144 GRPEL1Q9HAV7 217 aa28.58■■■□□ 2.17
CUEDC1-202ENST00000407144 RBM10P98175 930 aaKnown RBP28.58■■■□□ 2.17
CUEDC1-202ENST00000407144 ERBB4Q15303 1308 aa28.58■■■□□ 2.17
CUEDC1-202ENST00000407144 DAPK1P53355 1430 aa28.56■■■□□ 2.16
CUEDC1-202ENST00000407144 TERF1P54274 439 aa28.56■■■□□ 2.16
CUEDC1-202ENST00000407144 KIAA1107Q9UPP5 1409 aa28.55■■■□□ 2.16
CUEDC1-202ENST00000407144 MAP7D2Q96T17 732 aa28.55■■■□□ 2.16
CUEDC1-202ENST00000407144 ZMYM3Q14202 1370 aa28.54■■■□□ 2.16
CUEDC1-202ENST00000407144 TRAK2O60296 914 aa28.54■■■□□ 2.16
CUEDC1-202ENST00000407144 CARD11Q9BXL7 1154 aa28.54■■■□□ 2.16
CUEDC1-202ENST00000407144 SLC24A1O60721 1099 aa28.54■■■□□ 2.16
CUEDC1-202ENST00000407144 DUSP27Q5VZP5 1158 aa28.54■■■□□ 2.16
CUEDC1-202ENST00000407144 ARXQ96QS3 562 aa28.54■■■□□ 2.16
CUEDC1-202ENST00000407144 DNMT1P26358 1616 aaKnown RBP28.54■■■□□ 2.16
CUEDC1-202ENST00000407144 ARHGEF12Q9NZN5 1544 aa28.53■■■□□ 2.16
CUEDC1-202ENST00000407144 PTPRGP23470 1445 aa28.53■■■□□ 2.16
CUEDC1-202ENST00000407144 TRIM44Q96DX7 344 aaPredicted RBP28.52■■■□□ 2.16
CUEDC1-202ENST00000407144 CCDC144AA2RUR9 1427 aa28.52■■■□□ 2.16
CUEDC1-202ENST00000407144 AAMPQ13685 434 aa28.52■■■□□ 2.16
CUEDC1-202ENST00000407144 SEC24BO95487 1268 aa28.51■■■□□ 2.16
CUEDC1-202ENST00000407144 TBC1D2Q9BYX2 928 aa28.51■■■□□ 2.15
CUEDC1-202ENST00000407144 PER1O15534 1290 aaPredicted RBP28.49■■■□□ 2.15
CUEDC1-202ENST00000407144 ZNF326Q5BKZ1 582 aaKnown RBP28.49■■■□□ 2.15
CUEDC1-202ENST00000407144 TBC1D32Q96NH3 1257 aa28.49■■■□□ 2.15
CUEDC1-202ENST00000407144 GZF1Q9H116 711 aaPredicted RBP28.49■■■□□ 2.15
CUEDC1-202ENST00000407144 UPF2Q9HAU5 1272 aaKnown RBP28.49■■■□□ 2.15
CUEDC1-202ENST00000407144 ST20-MTHFSA0A0A6YYL1 179 aa28.48■■■□□ 2.15
CUEDC1-202ENST00000407144 CHMP5Q9NZZ3 219 aa28.47■■■□□ 2.15
CUEDC1-202ENST00000407144 ABCC5O15440 1437 aa28.47■■■□□ 2.15
CUEDC1-202ENST00000407144 ADCY10Q96PN6 1610 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms