RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 CFAP74Q9C0B2 1584 aa34.55■■■■□ 3.12
DNMT3A-206ENST00000406659 PLA2R1Q13018 1463 aa34.54■■■■□ 3.12
DNMT3A-206ENST00000406659 SPATA31E1Q6ZUB1 1445 aa34.54■■■■□ 3.12
DNMT3A-206ENST00000406659 DCAF11Q8TEB1 546 aa34.51■■■■□ 3.12
DNMT3A-206ENST00000406659 KDM2AQ9Y2K7 1162 aa34.51■■■■□ 3.12
DNMT3A-206ENST00000406659 ZNF518AQ6AHZ1 1483 aa34.49■■■■□ 3.11
DNMT3A-206ENST00000406659 ATP10AO60312 1499 aa34.48■■■■□ 3.11
DNMT3A-206ENST00000406659 DHX29Q7Z478 1369 aaKnown RBP34.48■■■■□ 3.11
DNMT3A-206ENST00000406659 RALGAPBQ86X10 1494 aa34.47■■■■□ 3.11
DNMT3A-206ENST00000406659 CCDC7Q96M83 1385 aa34.46■■■■□ 3.11
DNMT3A-206ENST00000406659 DEPDC5O75140 1603 aa34.46■■■■□ 3.11
DNMT3A-206ENST00000406659 KANK1Q14678 1352 aa34.45■■■■□ 3.11
DNMT3A-206ENST00000406659 CYB5RLQ6IPT4 315 aa34.44■■■■□ 3.1
DNMT3A-206ENST00000406659 CCER2I3L3R5 266 aa34.44■■■■□ 3.1
DNMT3A-206ENST00000406659 USP47Q96K76 1375 aa34.44■■■■□ 3.1
DNMT3A-206ENST00000406659 C11orf95C9JLR9 678 aaPredicted RBP34.43■■■■□ 3.1
DNMT3A-206ENST00000406659 KIF3BO15066 747 aa34.42■■■■□ 3.1
DNMT3A-206ENST00000406659 EIF2AK4Q9P2K8 1649 aaKnown RBP34.42■■■■□ 3.1
DNMT3A-206ENST00000406659 KIDINS220Q9ULH0 1771 aa34.41■■■■□ 3.1
DNMT3A-206ENST00000406659 RGL3Q3MIN7 710 aa34.41■■■■□ 3.1
DNMT3A-206ENST00000406659 POGZQ7Z3K3 1410 aa34.38■■■■□ 3.09
DNMT3A-206ENST00000406659 CARD11Q9BXL7 1154 aa34.38■■■■□ 3.09
DNMT3A-206ENST00000406659 E9PCH4 1651 aa34.38■■■■□ 3.09
DNMT3A-206ENST00000406659 KDM5CP41229 1560 aa34.37■■■■□ 3.09
DNMT3A-206ENST00000406659 RIMBP3CA6NJZ7 1639 aa34.36■■■■□ 3.09
DNMT3A-206ENST00000406659 RIMBP3BA6NNM3 1639 aa34.36■■■■□ 3.09
DNMT3A-206ENST00000406659 RIMBP3Q9UFD9 1639 aa34.36■■■■□ 3.09
DNMT3A-206ENST00000406659 POLR1AO95602 1720 aaPredicted RBP34.36■■■■□ 3.09
DNMT3A-206ENST00000406659 CNTLNQ9NXG0 1405 aa34.36■■■■□ 3.09
DNMT3A-206ENST00000406659 NEO1Q92859 1461 aa34.35■■■■□ 3.09
DNMT3A-206ENST00000406659 TET3O43151 1660 aa34.34■■■■□ 3.09
DNMT3A-206ENST00000406659 GTF3C3Q9Y5Q9 886 aa34.34■■■■□ 3.09
DNMT3A-206ENST00000406659 KIF7Q2M1P5 1343 aa34.34■■■■□ 3.09
DNMT3A-206ENST00000406659 VWDEQ8N2E2 1590 aa34.34■■■■□ 3.09
DNMT3A-206ENST00000406659 A2MP01023 1474 aa34.32■■■■□ 3.09
DNMT3A-206ENST00000406659 PRAG1Q86YV5 1406 aa34.31■■■■□ 3.08
DNMT3A-206ENST00000406659 MLH3Q9UHC1 1453 aa34.31■■■■□ 3.08
DNMT3A-206ENST00000406659 PRDM15P57071 1507 aaPredicted RBP34.3■■■■□ 3.08
DNMT3A-206ENST00000406659 ROCK2O75116 1388 aaKnown RBP34.28■■■■□ 3.08
DNMT3A-206ENST00000406659 TRPM2O94759 1503 aa34.27■■■■□ 3.08
DNMT3A-206ENST00000406659 PTPRTO14522 1441 aa34.27■■■■□ 3.08
DNMT3A-206ENST00000406659 HECW2Q9P2P5 1572 aa34.26■■■■□ 3.08
DNMT3A-206ENST00000406659 MROH1Q8NDA8 1641 aa34.26■■■■□ 3.08
DNMT3A-206ENST00000406659 SPHKAPQ2M3C7 1700 aa34.26■■■■□ 3.08
DNMT3A-206ENST00000406659 TRPM1Q7Z4N2 1603 aa34.24■■■■□ 3.07
DNMT3A-206ENST00000406659 BCORL1Q5H9F3 1711 aa34.23■■■■□ 3.07
DNMT3A-206ENST00000406659 ARID4BQ4LE39 1312 aaPredicted RBP34.23■■■■□ 3.07
DNMT3A-206ENST00000406659 MAP3K4Q9Y6R4 1608 aa34.23■■■■□ 3.07
DNMT3A-206ENST00000406659 GLI2P10070 1586 aa34.21■■■■□ 3.07
DNMT3A-206ENST00000406659 RNF17Q9BXT8 1623 aaKnown RBP34.17■■■■□ 3.06
DNMT3A-206ENST00000406659 RAPGEF3O95398 923 aa34.17■■■■□ 3.06
DNMT3A-206ENST00000406659 CEP152O94986 1710 aa34.16■■■■□ 3.06
DNMT3A-206ENST00000406659 ST20-MTHFSA0A0A6YYL1 179 aa34.16■■■■□ 3.06
DNMT3A-206ENST00000406659 CLTCL1P53675 1640 aa34.15■■■■□ 3.06
DNMT3A-206ENST00000406659 GPRASP1Q5JY77 1395 aa34.14■■■■□ 3.06
DNMT3A-206ENST00000406659 POLR3GLQ9BT43 218 aa34.13■■■■□ 3.05
DNMT3A-206ENST00000406659 FRMPD1Q5SYB0 1578 aa34.13■■■■□ 3.05
DNMT3A-206ENST00000406659 ABCA6Q8N139 1617 aa34.13■■■■□ 3.05
DNMT3A-206ENST00000406659 NBPF1Q3BBV0 1214 aa34.13■■■■□ 3.05
DNMT3A-206ENST00000406659 EFCAB6Q5THR3 1501 aa34.12■■■■□ 3.05
DNMT3A-206ENST00000406659 LMTK2Q8IWU2 1503 aa34.12■■■■□ 3.05
DNMT3A-206ENST00000406659 STAC3Q96MF2 364 aa34.1■■■■□ 3.05
DNMT3A-206ENST00000406659 LAMC1P11047 1609 aa34.1■■■■□ 3.05
DNMT3A-206ENST00000406659 FAM69CQ0P6D2 419 aa34.09■■■■□ 3.05
DNMT3A-206ENST00000406659 RICTORQ6R327 1708 aa34.06■■■■□ 3.04
DNMT3A-206ENST00000406659 PPRC1Q5VV67 1664 aaKnown RBP34.06■■■■□ 3.04
DNMT3A-206ENST00000406659 GGT6Q6P531 493 aa34.06■■■■□ 3.04
DNMT3A-206ENST00000406659 PRKRIP1Q9H875 184 aaPredicted RBP34.06■■■■□ 3.04
DNMT3A-206ENST00000406659 DIP2BQ9P265 1576 aa34.03■■■■□ 3.04
DNMT3A-206ENST00000406659 DIP2CQ9Y2E4 1556 aa34.02■■■■□ 3.04
DNMT3A-206ENST00000406659 NEURL4Q96JN8 1562 aa34.01■■■■□ 3.03
DNMT3A-206ENST00000406659 MADDQ8WXG6 1647 aa33.99■■■■□ 3.03
DNMT3A-206ENST00000406659 WASHC2CQ9Y4E1 1318 aa33.97■■■■□ 3.03
DNMT3A-206ENST00000406659 KIF1BO60333 1816 aa33.95■■■■□ 3.03
DNMT3A-206ENST00000406659 UGGT1Q9NYU2 1555 aa33.94■■■■□ 3.02
DNMT3A-206ENST00000406659 ABCC3O15438 1527 aa33.93■■■■□ 3.02
DNMT3A-206ENST00000406659 NPATQ14207 1427 aa33.91■■■■□ 3.02
DNMT3A-206ENST00000406659 YEATS2Q9ULM3 1422 aa33.9■■■■□ 3.02
DNMT3A-206ENST00000406659 TSPOAP1O95153 1857 aa33.88■■■■□ 3.01
DNMT3A-206ENST00000406659 TESK2Q96S53 571 aa33.85■■■■□ 3.01
DNMT3A-206ENST00000406659 ZMYM4Q5VZL5 1548 aa33.85■■■■□ 3.01
DNMT3A-206ENST00000406659 CCDC184Q52MB2 194 aa33.84■■■■□ 3.01
DNMT3A-206ENST00000406659 CAMSAP1Q5T5Y3 1602 aa33.84■■■■□ 3.01
DNMT3A-206ENST00000406659 MRS2Q9HD23 443 aa33.83■■■■□ 3.01
DNMT3A-206ENST00000406659 MYOM2P54296 1465 aa33.83■■■■□ 3.01
DNMT3A-206ENST00000406659 CFAP65Q6ZU64 1925 aaKnown RBP33.83■■■■□ 3.01
DNMT3A-206ENST00000406659 COL17A1Q9UMD9 1497 aaPredicted RBP33.82■■■■□ 3
DNMT3A-206ENST00000406659 KIAA1210Q9ULL0 1709 aa33.8■■■■□ 3
DNMT3A-206ENST00000406659 CHGAP10645 457 aaKnown RBP33.8■■■■□ 3
DNMT3A-206ENST00000406659 TMF1P82094 1093 aa33.8■■■■□ 3
DNMT3A-206ENST00000406659 MROH2AA6NES4 1674 aa33.8■■■■□ 3
DNMT3A-206ENST00000406659 IQGAP1P46940 1657 aa33.79■■■■□ 3
DNMT3A-206ENST00000406659 ADGRB3O60242 1522 aa33.78■■■■□ 3
DNMT3A-206ENST00000406659 SCAF11Q99590 1463 aaKnown RBP33.78■■■■□ 3
DNMT3A-206ENST00000406659 DISP3Q9P2K9 1392 aa33.77■■■■□ 3
DNMT3A-206ENST00000406659 ZC3H13Q5T200 1668 aaKnown RBP33.77■■■■□ 3
DNMT3A-206ENST00000406659 IFT172Q9UG01 1749 aa33.77■■■■□ 3
DNMT3A-206ENST00000406659 HNRNPUQ00839 825 aaKnown RBP eCLIP33.75■■■□□ 2.99
DNMT3A-206ENST00000406659 CNGB1Q14028 1251 aaPredicted RBP33.75■■■□□ 2.99
DNMT3A-206ENST00000406659 ADGRF5Q8IZF2 1346 aa33.75■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms