RNA–Protein interactions for RNA: ENST00000405755.6

PDE4D-207, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-207ENST00000405755 KIF13AQ9H1H9 1805 aa13.38□□□□□ -0.27
PDE4D-207ENST00000405755 NBPF8Q3BBV2 869 aa13.38□□□□□ -0.27
PDE4D-207ENST00000405755 EIF4G2P78344 907 aaKnown RBP eCLIP13.37□□□□□ -0.27
PDE4D-207ENST00000405755 POGZQ7Z3K3 1410 aa13.36□□□□□ -0.27
PDE4D-207ENST00000405755 KIDINS220Q9ULH0 1771 aa13.36□□□□□ -0.27
PDE4D-207ENST00000405755 HSPA5P11021 654 aaKnown RBP13.36□□□□□ -0.27
PDE4D-207ENST00000405755 NEO1Q92859 1461 aa13.35□□□□□ -0.27
PDE4D-207ENST00000405755 KIF3BO15066 747 aa13.35□□□□□ -0.27
PDE4D-207ENST00000405755 DEPDC5O75140 1603 aa13.35□□□□□ -0.27
PDE4D-207ENST00000405755 KANK1Q14678 1352 aa13.35□□□□□ -0.27
PDE4D-207ENST00000405755 YTHDC1Q96MU7 727 aaKnown RBP13.34□□□□□ -0.27
PDE4D-207ENST00000405755 DHX29Q7Z478 1369 aaKnown RBP13.34□□□□□ -0.27
PDE4D-207ENST00000405755 KDM5CP41229 1560 aa13.34□□□□□ -0.27
PDE4D-207ENST00000405755 FAM69CQ0P6D2 419 aa13.34□□□□□ -0.27
PDE4D-207ENST00000405755 EIF2AK4Q9P2K8 1649 aaKnown RBP13.34□□□□□ -0.27
PDE4D-207ENST00000405755 MAP3K4Q9Y6R4 1608 aa13.34□□□□□ -0.27
PDE4D-207ENST00000405755 HECW2Q9P2P5 1572 aa13.33□□□□□ -0.27
PDE4D-207ENST00000405755 KDM2AQ9Y2K7 1162 aa13.33□□□□□ -0.28
PDE4D-207ENST00000405755 DCAF11Q8TEB1 546 aa13.32□□□□□ -0.28
PDE4D-207ENST00000405755 PLA2R1Q13018 1463 aa13.32□□□□□ -0.28
PDE4D-207ENST00000405755 E9PCH4 1651 aa13.31□□□□□ -0.28
PDE4D-207ENST00000405755 A2MP01023 1474 aa13.31□□□□□ -0.28
PDE4D-207ENST00000405755 GLI2P10070 1586 aa13.31□□□□□ -0.28
PDE4D-207ENST00000405755 RAPGEF3O95398 923 aa13.3□□□□□ -0.28
PDE4D-207ENST00000405755 RGL3Q3MIN7 710 aa13.3□□□□□ -0.28
PDE4D-207ENST00000405755 MLH3Q9UHC1 1453 aa13.3□□□□□ -0.28
PDE4D-207ENST00000405755 CENPBP07199 599 aaPredicted RBP13.3□□□□□ -0.28
PDE4D-207ENST00000405755 PRDM15P57071 1507 aaPredicted RBP13.3□□□□□ -0.28
PDE4D-207ENST00000405755 DIP2BQ9P265 1576 aa13.29□□□□□ -0.28
PDE4D-207ENST00000405755 TET3O43151 1660 aa13.29□□□□□ -0.28
PDE4D-207ENST00000405755 ATP10AO60312 1499 aa13.29□□□□□ -0.28
PDE4D-207ENST00000405755 UHRF1BP1Q6BDS2 1440 aa13.29□□□□□ -0.28
PDE4D-207ENST00000405755 MROH1Q8NDA8 1641 aa13.28□□□□□ -0.28
PDE4D-207ENST00000405755 ABCA6Q8N139 1617 aa13.27□□□□□ -0.28
PDE4D-207ENST00000405755 VWDEQ8N2E2 1590 aa13.27□□□□□ -0.29
PDE4D-207ENST00000405755 RALGAPBQ86X10 1494 aa13.27□□□□□ -0.29
PDE4D-207ENST00000405755 SPHKAPQ2M3C7 1700 aa13.27□□□□□ -0.29
PDE4D-207ENST00000405755 WASHC2AQ641Q2 1341 aa13.27□□□□□ -0.29
PDE4D-207ENST00000405755 TSPOAP1O95153 1857 aa13.26□□□□□ -0.29
PDE4D-207ENST00000405755 USP47Q96K76 1375 aa13.26□□□□□ -0.29
PDE4D-207ENST00000405755 TRPM2O94759 1503 aa13.26□□□□□ -0.29
PDE4D-207ENST00000405755 RICTORQ6R327 1708 aa13.26□□□□□ -0.29
PDE4D-207ENST00000405755 CARD11Q9BXL7 1154 aa13.25□□□□□ -0.29
PDE4D-207ENST00000405755 SPATA31E1Q6ZUB1 1445 aa13.25□□□□□ -0.29
PDE4D-207ENST00000405755 FRMPD1Q5SYB0 1578 aa13.25□□□□□ -0.29
PDE4D-207ENST00000405755 RNF17Q9BXT8 1623 aaKnown RBP13.24□□□□□ -0.29
PDE4D-207ENST00000405755 ANP32CO43423 234 aa13.24□□□□□ -0.29
PDE4D-207ENST00000405755 GGT6Q6P531 493 aa13.24□□□□□ -0.29
PDE4D-207ENST00000405755 ROCK2O75116 1388 aaKnown RBP13.23□□□□□ -0.29
PDE4D-207ENST00000405755 CEP152O94986 1710 aa13.23□□□□□ -0.29
PDE4D-207ENST00000405755 PRAG1Q86YV5 1406 aa13.23□□□□□ -0.29
PDE4D-207ENST00000405755 EFCAB6Q5THR3 1501 aa13.23□□□□□ -0.29
PDE4D-207ENST00000405755 DIP2CQ9Y2E4 1556 aa13.23□□□□□ -0.29
PDE4D-207ENST00000405755 PTPRTO14522 1441 aa13.22□□□□□ -0.29
PDE4D-207ENST00000405755 CCDC7Q96M83 1385 aa13.22□□□□□ -0.29
PDE4D-207ENST00000405755 CLTCL1P53675 1640 aa13.21□□□□□ -0.29
PDE4D-207ENST00000405755 PPRC1Q5VV67 1664 aaKnown RBP13.21□□□□□ -0.29
PDE4D-207ENST00000405755 POLR1AO95602 1720 aaPredicted RBP13.21□□□□□ -0.3
PDE4D-207ENST00000405755 TRPM1Q7Z4N2 1603 aa13.21□□□□□ -0.3
PDE4D-207ENST00000405755 C11orf95C9JLR9 678 aaPredicted RBP13.2□□□□□ -0.3
PDE4D-207ENST00000405755 YEATS2Q9ULM3 1422 aa13.2□□□□□ -0.3
PDE4D-207ENST00000405755 BCORL1Q5H9F3 1711 aa13.19□□□□□ -0.3
PDE4D-207ENST00000405755 WASHC2CQ9Y4E1 1318 aa13.19□□□□□ -0.3
PDE4D-207ENST00000405755 LMTK2Q8IWU2 1503 aa13.19□□□□□ -0.3
PDE4D-207ENST00000405755 KIF7Q2M1P5 1343 aa13.19□□□□□ -0.3
PDE4D-207ENST00000405755 POLR3GLQ9BT43 218 aa13.18□□□□□ -0.3
PDE4D-207ENST00000405755 CNTLNQ9NXG0 1405 aa13.18□□□□□ -0.3
PDE4D-207ENST00000405755 UGGT1Q9NYU2 1555 aa13.17□□□□□ -0.3
PDE4D-207ENST00000405755 ZMYM4Q5VZL5 1548 aa13.16□□□□□ -0.3
PDE4D-207ENST00000405755 ABCC3O15438 1527 aa13.16□□□□□ -0.3
PDE4D-207ENST00000405755 NBPF1Q3BBV0 1214 aa13.15□□□□□ -0.3
PDE4D-207ENST00000405755 ST20-MTHFSA0A0A6YYL1 179 aa13.15□□□□□ -0.3
PDE4D-207ENST00000405755 KIF1BO60333 1816 aa13.15□□□□□ -0.3
PDE4D-207ENST00000405755 NPATQ14207 1427 aa13.15□□□□□ -0.3
PDE4D-207ENST00000405755 CAMSAP1Q5T5Y3 1602 aa13.14□□□□□ -0.31
PDE4D-207ENST00000405755 CFAP65Q6ZU64 1925 aaKnown RBP13.14□□□□□ -0.31
PDE4D-207ENST00000405755 CCER2I3L3R5 266 aa13.13□□□□□ -0.31
PDE4D-207ENST00000405755 MADDQ8WXG6 1647 aa13.13□□□□□ -0.31
PDE4D-207ENST00000405755 GPRASP1Q5JY77 1395 aa13.12□□□□□ -0.31
PDE4D-207ENST00000405755 CHGAP10645 457 aaKnown RBP13.12□□□□□ -0.31
PDE4D-207ENST00000405755 ZC3H13Q5T200 1668 aaKnown RBP13.12□□□□□ -0.31
PDE4D-207ENST00000405755 LAMC1P11047 1609 aa13.12□□□□□ -0.31
PDE4D-207ENST00000405755 ARID4BQ4LE39 1312 aaPredicted RBP13.11□□□□□ -0.31
PDE4D-207ENST00000405755 STAC3Q96MF2 364 aa13.11□□□□□ -0.31
PDE4D-207ENST00000405755 NEURL4Q96JN8 1562 aa13.11□□□□□ -0.31
PDE4D-207ENST00000405755 MROH2AA6NES4 1674 aa13.1□□□□□ -0.31
PDE4D-207ENST00000405755 KDM4FA0A1W2PPD8 638 aa13.09□□□□□ -0.31
PDE4D-207ENST00000405755 SIGLEC1Q9BZZ2 1709 aa13.07□□□□□ -0.32
PDE4D-207ENST00000405755 ADGRB3O60242 1522 aa13.07□□□□□ -0.32
PDE4D-207ENST00000405755 SCAF1Q9H7N4 1312 aaKnown RBP13.07□□□□□ -0.32
PDE4D-207ENST00000405755 MYOM2P54296 1465 aa13.07□□□□□ -0.32
PDE4D-207ENST00000405755 IFT172Q9UG01 1749 aa13.06□□□□□ -0.32
PDE4D-207ENST00000405755 COL17A1Q9UMD9 1497 aaPredicted RBP13.06□□□□□ -0.32
PDE4D-207ENST00000405755 NOS1P29475 1434 aa13.05□□□□□ -0.32
PDE4D-207ENST00000405755 ARHGAP31Q2M1Z3 1444 aa13.05□□□□□ -0.32
PDE4D-207ENST00000405755 PRKRIP1Q9H875 184 aaPredicted RBP13.05□□□□□ -0.32
PDE4D-207ENST00000405755 REREQ9P2R6 1566 aa13.05□□□□□ -0.32
PDE4D-207ENST00000405755 CNGB1Q14028 1251 aaPredicted RBP13.05□□□□□ -0.32
PDE4D-207ENST00000405755 SYNMO15061 1565 aa13.04□□□□□ -0.32
PDE4D-207ENST00000405755 ARHGEF40Q8TER5 1519 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms