RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 ARHGAP5Q13017 1502 aa10.24□□□□□ -0.77
HDAC9-201ENST00000401921 ITSN2Q9NZM3 1697 aa10.24□□□□□ -0.77
HDAC9-201ENST00000401921 KNSTRNQ9Y448 316 aa10.24□□□□□ -0.77
HDAC9-201ENST00000401921 NLRP13Q86W25 1043 aa10.24□□□□□ -0.77
HDAC9-201ENST00000401921 AFAP1Q8N556 730 aa10.24□□□□□ -0.77
HDAC9-201ENST00000401921 SPATA31E1Q6ZUB1 1445 aa10.23□□□□□ -0.77
HDAC9-201ENST00000401921 WDR43Q15061 677 aaKnown RBP eCLIP10.23□□□□□ -0.77
HDAC9-201ENST00000401921 ARID4BQ4LE39 1312 aaPredicted RBP10.23□□□□□ -0.77
HDAC9-201ENST00000401921 NUP160Q12769 1436 aa10.23□□□□□ -0.77
HDAC9-201ENST00000401921 SPAG9O60271 1321 aaKnown RBP10.22□□□□□ -0.77
HDAC9-201ENST00000401921 KIF3BO15066 747 aa10.22□□□□□ -0.77
HDAC9-201ENST00000401921 ANP32AP39687 249 aaKnown RBP10.22□□□□□ -0.77
HDAC9-201ENST00000401921 RCAN3Q9UKA8 241 aa10.21□□□□□ -0.77
HDAC9-201ENST00000401921 NBR1Q14596 966 aa10.21□□□□□ -0.78
HDAC9-201ENST00000401921 CCDC141Q6ZP82 1450 aa10.21□□□□□ -0.78
HDAC9-201ENST00000401921 DHX29Q7Z478 1369 aaKnown RBP10.21□□□□□ -0.78
HDAC9-201ENST00000401921 DEKP35659 375 aaKnown RBP10.2□□□□□ -0.78
HDAC9-201ENST00000401921 ADGRL2O95490 1459 aa10.19□□□□□ -0.78
HDAC9-201ENST00000401921 CDCA7LQ96GN5 454 aa10.19□□□□□ -0.78
HDAC9-201ENST00000401921 PLIN1O60240 522 aa10.19□□□□□ -0.78
HDAC9-201ENST00000401921 NPM1P06748 294 aaKnown RBP eCLIP10.19□□□□□ -0.78
HDAC9-201ENST00000401921 MSH5O43196 834 aa10.18□□□□□ -0.78
HDAC9-201ENST00000401921 EXOC6Q8TAG9 804 aa10.18□□□□□ -0.78
HDAC9-201ENST00000401921 PLEKHH2Q8IVE3 1493 aa10.18□□□□□ -0.78
HDAC9-201ENST00000401921 UBE2Q2Q8WVN8 375 aa10.17□□□□□ -0.78
HDAC9-201ENST00000401921 BRD4O60885 1362 aaPredicted RBP10.17□□□□□ -0.78
HDAC9-201ENST00000401921 ABCC10Q5T3U5 1492 aa10.16□□□□□ -0.78
HDAC9-201ENST00000401921 TNNT2P45379 298 aaPredicted RBP10.16□□□□□ -0.78
HDAC9-201ENST00000401921 PPP6R1Q9UPN7 881 aa10.16□□□□□ -0.78
HDAC9-201ENST00000401921 SMG6Q86US8 1419 aaKnown RBP10.16□□□□□ -0.78
HDAC9-201ENST00000401921 RALGAPBQ86X10 1494 aa10.16□□□□□ -0.78
HDAC9-201ENST00000401921 ADGBQ8N7X0 1667 aa10.16□□□□□ -0.78
HDAC9-201ENST00000401921 SYCP2Q9BX26 1530 aa10.16□□□□□ -0.78
HDAC9-201ENST00000401921 RRP1P56182 461 aaKnown RBP10.15□□□□□ -0.78
HDAC9-201ENST00000401921 CDCA8Q53HL2 280 aa10.15□□□□□ -0.78
HDAC9-201ENST00000401921 GGT6Q6P531 493 aa10.15□□□□□ -0.78
HDAC9-201ENST00000401921 ZBTB47Q9UFB7 747 aaPredicted RBP10.15□□□□□ -0.78
HDAC9-201ENST00000401921 FANCIQ9NVI1 1328 aa10.15□□□□□ -0.78
HDAC9-201ENST00000401921 ABCA8O94911 1581 aa10.14□□□□□ -0.79
HDAC9-201ENST00000401921 FAM135AQ9P2D6 1515 aa10.14□□□□□ -0.79
HDAC9-201ENST00000401921 EIF5BO60841 1220 aaKnown RBP10.14□□□□□ -0.79
HDAC9-201ENST00000401921 NEUROD2Q15784 382 aa10.14□□□□□ -0.79
HDAC9-201ENST00000401921 CCDC146Q8IYE0 955 aa10.14□□□□□ -0.79
HDAC9-201ENST00000401921 CDC42BPAQ5VT25 1732 aa10.14□□□□□ -0.79
HDAC9-201ENST00000401921 RTL5Q5HYW3 569 aaPredicted RBP10.13□□□□□ -0.79
HDAC9-201ENST00000401921 KANK1Q14678 1352 aa10.13□□□□□ -0.79
HDAC9-201ENST00000401921 MBD5Q9P267 1494 aa10.13□□□□□ -0.79
HDAC9-201ENST00000401921 BCORL1Q5H9F3 1711 aa10.13□□□□□ -0.79
HDAC9-201ENST00000401921 ADAMTS8Q9UP79 889 aa10.13□□□□□ -0.79
HDAC9-201ENST00000401921 SHANK2Q9UPX8 1470 aa10.13□□□□□ -0.79
HDAC9-201ENST00000401921 NOP58Q9Y2X3 529 aaKnown RBP10.13□□□□□ -0.79
HDAC9-201ENST00000401921 UHRF1BP1Q6BDS2 1440 aa10.12□□□□□ -0.79
HDAC9-201ENST00000401921 DISP3Q9P2K9 1392 aa10.12□□□□□ -0.79
HDAC9-201ENST00000401921 DAXXQ9UER7 740 aaPredicted RBP10.12□□□□□ -0.79
HDAC9-201ENST00000401921 CANXP27824 592 aaKnown RBP10.12□□□□□ -0.79
HDAC9-201ENST00000401921 NUTM2DQ5VT03 806 aaPredicted RBP10.12□□□□□ -0.79
HDAC9-201ENST00000401921 PDE3BQ13370 1112 aa10.11□□□□□ -0.79
HDAC9-201ENST00000401921 PRAG1Q86YV5 1406 aa10.11□□□□□ -0.79
HDAC9-201ENST00000401921 CFAP70Q5T0N1 1121 aa10.11□□□□□ -0.79
HDAC9-201ENST00000401921 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.11□□□□□ -0.79
HDAC9-201ENST00000401921 ERBINQ96RT1 1412 aa10.11□□□□□ -0.79
HDAC9-201ENST00000401921 TESK2Q96S53 571 aa10.1□□□□□ -0.79
HDAC9-201ENST00000401921 KDM5CP41229 1560 aa10.1□□□□□ -0.79
HDAC9-201ENST00000401921 PER1O15534 1290 aaPredicted RBP10.09□□□□□ -0.79
HDAC9-201ENST00000401921 SAFB2Q14151 953 aaKnown RBP eCLIP10.09□□□□□ -0.79
HDAC9-201ENST00000401921 TRAK1Q9UPV9 953 aa10.09□□□□□ -0.79
HDAC9-201ENST00000401921 CRBNQ96SW2 442 aa10.09□□□□□ -0.79
HDAC9-201ENST00000401921 ADCY10Q96PN6 1610 aa10.09□□□□□ -0.79
HDAC9-201ENST00000401921 SAMD9LQ8IVG5 1584 aa10.09□□□□□ -0.79
HDAC9-201ENST00000401921 SCAPERQ9BY12 1400 aa10.09□□□□□ -0.79
HDAC9-201ENST00000401921 ARHGEF12Q9NZN5 1544 aa10.09□□□□□ -0.79
HDAC9-201ENST00000401921 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.08□□□□□ -0.8
HDAC9-201ENST00000401921 TRAPPC8Q9Y2L5 1435 aa10.08□□□□□ -0.8
HDAC9-201ENST00000401921 PPP2R1AP30153 589 aa10.08□□□□□ -0.8
HDAC9-201ENST00000401921 A2MP01023 1474 aa10.07□□□□□ -0.8
HDAC9-201ENST00000401921 APAF1O14727 1248 aa10.07□□□□□ -0.8
HDAC9-201ENST00000401921 GOLGA2Q08379 1002 aa10.07□□□□□ -0.8
HDAC9-201ENST00000401921 SKAP1Q86WV1 359 aa10.07□□□□□ -0.8
HDAC9-201ENST00000401921 CROCC2H7BZ55 1655 aa10.07□□□□□ -0.8
HDAC9-201ENST00000401921 PAK3O75914 559 aaPredicted RBP10.06□□□□□ -0.8
HDAC9-201ENST00000401921 RGS3P49796 1198 aa10.06□□□□□ -0.8
HDAC9-201ENST00000401921 PLCH2O75038 1416 aa10.06□□□□□ -0.8
HDAC9-201ENST00000401921 RTN4Q9NQC3 1192 aaKnown RBP10.06□□□□□ -0.8
HDAC9-201ENST00000401921 WASHC2CQ9Y4E1 1318 aa10.05□□□□□ -0.8
HDAC9-201ENST00000401921 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.05□□□□□ -0.8
HDAC9-201ENST00000401921 ERCC6L2Q5T890 1561 aa10.05□□□□□ -0.8
HDAC9-201ENST00000401921 LAS1LQ9Y4W2 734 aaKnown RBP10.05□□□□□ -0.8
HDAC9-201ENST00000401921 PARD3Q8TEW0 1356 aa10.05□□□□□ -0.8
HDAC9-201ENST00000401921 TMEM132EQ6IEE7 984 aa10.05□□□□□ -0.8
HDAC9-201ENST00000401921 IPO9Q96P70 1041 aaKnown RBP10.05□□□□□ -0.8
HDAC9-201ENST00000401921 ARHGEF5Q12774 1597 aa10.05□□□□□ -0.8
HDAC9-201ENST00000401921 PLA2R1Q13018 1463 aa10.05□□□□□ -0.8
HDAC9-201ENST00000401921 TCERG1O14776 1098 aaKnown RBP10.04□□□□□ -0.8
HDAC9-201ENST00000401921 MORC1Q86VD1 984 aa10.04□□□□□ -0.8
HDAC9-201ENST00000401921 TTC37Q6PGP7 1564 aa10.04□□□□□ -0.8
HDAC9-201ENST00000401921 PDE4AP27815 886 aa10.04□□□□□ -0.8
HDAC9-201ENST00000401921 FRAT1Q92837 279 aaPredicted RBP10.04□□□□□ -0.8
HDAC9-201ENST00000401921 STK26Q9P289 416 aa10.04□□□□□ -0.8
HDAC9-201ENST00000401921 LRPPRCP42704 1394 aaKnown RBP10.04□□□□□ -0.8
HDAC9-201ENST00000401921 EIF3AQ14152 1382 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms