RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 TEX14Q8IWB6 1497 aa36.84■■■■□ 3.49
CPNE1-205ENST00000401607 DHX29Q7Z478 1369 aaKnown RBP36.83■■■■□ 3.49
CPNE1-205ENST00000401607 EIF2AK4Q9P2K8 1649 aaKnown RBP36.83■■■■□ 3.49
CPNE1-205ENST00000401607 PPRC1Q5VV67 1664 aaKnown RBP36.8■■■■□ 3.48
CPNE1-205ENST00000401607 RICTORQ6R327 1708 aa36.79■■■■□ 3.48
CPNE1-205ENST00000401607 L3MBTL2Q969R5 705 aa36.79■■■■□ 3.48
CPNE1-205ENST00000401607 DIEXFQ68CQ4 756 aaKnown RBP36.76■■■■□ 3.48
CPNE1-205ENST00000401607 RAPGEF3O95398 923 aa36.75■■■■□ 3.47
CPNE1-205ENST00000401607 A2MP01023 1474 aa36.74■■■■□ 3.47
CPNE1-205ENST00000401607 ABCA6Q8N139 1617 aa36.74■■■■□ 3.47
CPNE1-205ENST00000401607 KIF13AQ9H1H9 1805 aa36.73■■■■□ 3.47
CPNE1-205ENST00000401607 TSPOAP1O95153 1857 aa36.72■■■■□ 3.47
CPNE1-205ENST00000401607 FRMPD1Q5SYB0 1578 aa36.72■■■■□ 3.47
CPNE1-205ENST00000401607 VWDEQ8N2E2 1590 aa36.71■■■■□ 3.47
CPNE1-205ENST00000401607 MROH1Q8NDA8 1641 aa36.71■■■■□ 3.47
CPNE1-205ENST00000401607 PRDM15P57071 1507 aaPredicted RBP36.69■■■■□ 3.46
CPNE1-205ENST00000401607 KIF3BO15066 747 aa36.68■■■■□ 3.46
CPNE1-205ENST00000401607 PLA2R1Q13018 1463 aa36.68■■■■□ 3.46
CPNE1-205ENST00000401607 DIP2CQ9Y2E4 1556 aa36.63■■■■□ 3.46
CPNE1-205ENST00000401607 RNF17Q9BXT8 1623 aaKnown RBP36.63■■■■□ 3.45
CPNE1-205ENST00000401607 E9PCH4 1651 aa36.62■■■■□ 3.45
CPNE1-205ENST00000401607 ATP10AO60312 1499 aa36.62■■■■□ 3.45
CPNE1-205ENST00000401607 TET3O43151 1660 aa36.62■■■■□ 3.45
CPNE1-205ENST00000401607 BCORL1Q5H9F3 1711 aa36.6■■■■□ 3.45
CPNE1-205ENST00000401607 KANK1Q14678 1352 aa36.6■■■■□ 3.45
CPNE1-205ENST00000401607 ZMYM4Q5VZL5 1548 aa36.59■■■■□ 3.45
CPNE1-205ENST00000401607 CCDC144AA2RUR9 1427 aa36.58■■■■□ 3.45
CPNE1-205ENST00000401607 NBPF8Q3BBV2 869 aa36.54■■■■□ 3.44
CPNE1-205ENST00000401607 YEATS2Q9ULM3 1422 aa36.53■■■■□ 3.44
CPNE1-205ENST00000401607 LMTK2Q8IWU2 1503 aa36.5■■■■□ 3.43
CPNE1-205ENST00000401607 SPHKAPQ2M3C7 1700 aa36.46■■■■□ 3.43
CPNE1-205ENST00000401607 PTPRTO14522 1441 aa36.46■■■■□ 3.43
CPNE1-205ENST00000401607 TRPM2O94759 1503 aa36.46■■■■□ 3.43
CPNE1-205ENST00000401607 EFCAB6Q5THR3 1501 aa36.45■■■■□ 3.43
CPNE1-205ENST00000401607 CEP152O94986 1710 aa36.45■■■■□ 3.43
CPNE1-205ENST00000401607 UHRF1BP1Q6BDS2 1440 aa36.43■■■■□ 3.42
CPNE1-205ENST00000401607 HIRIP3Q9BW71 556 aaPredicted RBP36.4■■■■□ 3.42
CPNE1-205ENST00000401607 COL17A1Q9UMD9 1497 aaPredicted RBP36.39■■■■□ 3.42
CPNE1-205ENST00000401607 GGT6Q6P531 493 aa36.36■■■■□ 3.41
CPNE1-205ENST00000401607 CLTCL1P53675 1640 aa36.35■■■■□ 3.41
CPNE1-205ENST00000401607 ABCC3O15438 1527 aa36.35■■■■□ 3.41
CPNE1-205ENST00000401607 DCAF11Q8TEB1 546 aa36.32■■■■□ 3.4
CPNE1-205ENST00000401607 REREQ9P2R6 1566 aa36.31■■■■□ 3.4
CPNE1-205ENST00000401607 SPATA31E1Q6ZUB1 1445 aa36.31■■■■□ 3.4
CPNE1-205ENST00000401607 HSPA5P11021 654 aaKnown RBP36.3■■■■□ 3.4
CPNE1-205ENST00000401607 EIF4G2P78344 907 aaKnown RBP eCLIP36.29■■■■□ 3.4
CPNE1-205ENST00000401607 ZNF326Q5BKZ1 582 aaKnown RBP36.29■■■■□ 3.4
CPNE1-205ENST00000401607 RALGAPBQ86X10 1494 aa36.29■■■■□ 3.4
CPNE1-205ENST00000401607 RGL3Q3MIN7 710 aa36.27■■■■□ 3.4
CPNE1-205ENST00000401607 KDM2AQ9Y2K7 1162 aa36.27■■■■□ 3.4
CPNE1-205ENST00000401607 CAMSAP1Q5T5Y3 1602 aa36.26■■■■□ 3.39
CPNE1-205ENST00000401607 NPATQ14207 1427 aa36.25■■■■□ 3.39
CPNE1-205ENST00000401607 ZC3H13Q5T200 1668 aaKnown RBP36.23■■■■□ 3.39
CPNE1-205ENST00000401607 WASHC2CQ9Y4E1 1318 aa36.23■■■■□ 3.39
CPNE1-205ENST00000401607 PRAG1Q86YV5 1406 aa36.22■■■■□ 3.39
CPNE1-205ENST00000401607 ARHGEF40Q8TER5 1519 aa36.22■■■■□ 3.39
CPNE1-205ENST00000401607 AGLP35573 1532 aa36.21■■■■□ 3.39
CPNE1-205ENST00000401607 UGGT1Q9NYU2 1555 aa36.2■■■■□ 3.39
CPNE1-205ENST00000401607 MIER1Q8N108 512 aa36.2■■■■□ 3.38
CPNE1-205ENST00000401607 NEURL4Q96JN8 1562 aa36.19■■■■□ 3.38
CPNE1-205ENST00000401607 SIGLEC1Q9BZZ2 1709 aa36.17■■■■□ 3.38
CPNE1-205ENST00000401607 TRPM1Q7Z4N2 1603 aa36.16■■■■□ 3.38
CPNE1-205ENST00000401607 ARHGAP31Q2M1Z3 1444 aa36.12■■■■□ 3.37
CPNE1-205ENST00000401607 DDX10Q13206 875 aaKnown RBP36.12■■■■□ 3.37
CPNE1-205ENST00000401607 CNTLNQ9NXG0 1405 aa36.11■■■■□ 3.37
CPNE1-205ENST00000401607 USP47Q96K76 1375 aa36.09■■■■□ 3.37
CPNE1-205ENST00000401607 KIF1BO60333 1816 aa36.09■■■■□ 3.37
CPNE1-205ENST00000401607 NOS1P29475 1434 aa36.08■■■■□ 3.37
CPNE1-205ENST00000401607 CFAP65Q6ZU64 1925 aaKnown RBP36.06■■■■□ 3.36
CPNE1-205ENST00000401607 MROH2AA6NES4 1674 aa36.05■■■■□ 3.36
CPNE1-205ENST00000401607 DNAJC5Q9H3Z4 198 aa36.05■■■■□ 3.36
CPNE1-205ENST00000401607 MADDQ8WXG6 1647 aa36.04■■■■□ 3.36
CPNE1-205ENST00000401607 WASHC2AQ641Q2 1341 aa36.04■■■■□ 3.36
CPNE1-205ENST00000401607 CARD11Q9BXL7 1154 aa36.04■■■■□ 3.36
CPNE1-205ENST00000401607 ROCK2O75116 1388 aaKnown RBP36.03■■■■□ 3.36
CPNE1-205ENST00000401607 ADGRB3O60242 1522 aa36.03■■■■□ 3.36
CPNE1-205ENST00000401607 SYNMO15061 1565 aa36.02■■■■□ 3.36
CPNE1-205ENST00000401607 GPRASP1Q5JY77 1395 aa36.01■■■■□ 3.35
CPNE1-205ENST00000401607 PIK3C2BO00750 1634 aa35.99■■■■□ 3.35
CPNE1-205ENST00000401607 LAMC1P11047 1609 aa35.99■■■■□ 3.35
CPNE1-205ENST00000401607 STAC3Q96MF2 364 aa35.99■■■■□ 3.35
CPNE1-205ENST00000401607 C11orf95C9JLR9 678 aaPredicted RBP35.98■■■■□ 3.35
CPNE1-205ENST00000401607 POLR1AO95602 1720 aaPredicted RBP35.98■■■■□ 3.35
CPNE1-205ENST00000401607 IFT172Q9UG01 1749 aa35.98■■■■□ 3.35
CPNE1-205ENST00000401607 TRHP20396 242 aaPredicted RBP35.97■■■■□ 3.35
CPNE1-205ENST00000401607 PPP6R1Q9UPN7 881 aa35.97■■■■□ 3.35
CPNE1-205ENST00000401607 NBPF1Q3BBV0 1214 aa35.95■■■■□ 3.35
CPNE1-205ENST00000401607 PREX1Q8TCU6 1659 aa35.95■■■■□ 3.35
CPNE1-205ENST00000401607 CCDC7Q96M83 1385 aa35.94■■■■□ 3.34
CPNE1-205ENST00000401607 MYOM2P54296 1465 aa35.93■■■■□ 3.34
CPNE1-205ENST00000401607 CLTCQ00610 1675 aaKnown RBP35.92■■■■□ 3.34
CPNE1-205ENST00000401607 KIF7Q2M1P5 1343 aa35.87■■■■□ 3.33
CPNE1-205ENST00000401607 MLECQ14165 292 aa35.84■■■■□ 3.33
CPNE1-205ENST00000401607 ERVK-7P63135 1459 aa35.84■■■■□ 3.33
CPNE1-205ENST00000401607 KIAA1210Q9ULL0 1709 aa35.83■■■■□ 3.33
CPNE1-205ENST00000401607 CHGAP10645 457 aaKnown RBP35.83■■■■□ 3.33
CPNE1-205ENST00000401607 PPLO60437 1756 aa35.83■■■■□ 3.33
CPNE1-205ENST00000401607 NRXN1Q9ULB1 1477 aa35.83■■■■□ 3.33
CPNE1-205ENST00000401607 ST20-MTHFSA0A0A6YYL1 179 aa35.82■■■■□ 3.33
CPNE1-205ENST00000401607 SLC52A1Q9NWF4 448 aa35.79■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms