RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 DUOX2Q9NRD8 1548 aa16.97■□□□□ 0.31
SKA3-203ENST00000400018 ARID4BQ4LE39 1312 aaPredicted RBP16.96■□□□□ 0.31
SKA3-203ENST00000400018 A2MP01023 1474 aa16.96■□□□□ 0.31
SKA3-203ENST00000400018 PLXNC1O60486 1568 aa16.95■□□□□ 0.3
SKA3-203ENST00000400018 KDM5CP41229 1560 aa16.95■□□□□ 0.3
SKA3-203ENST00000400018 HECW2Q9P2P5 1572 aa16.95■□□□□ 0.3
SKA3-203ENST00000400018 KDM2AQ9Y2K7 1162 aa16.95■□□□□ 0.3
SKA3-203ENST00000400018 RTEL1-TNFRSF6BF6WH68 1400 aa16.95■□□□□ 0.3
SKA3-203ENST00000400018 FAM135AQ9P2D6 1515 aa16.94■□□□□ 0.3
SKA3-203ENST00000400018 SIGLEC1Q9BZZ2 1709 aa16.94■□□□□ 0.3
SKA3-203ENST00000400018 CFAP74Q9C0B2 1584 aa16.93■□□□□ 0.3
SKA3-203ENST00000400018 ANKRD30BQ9BXX2 1392 aa16.93■□□□□ 0.3
SKA3-203ENST00000400018 L3MBTL2Q969R5 705 aa16.93■□□□□ 0.3
SKA3-203ENST00000400018 TEX14Q8IWB6 1497 aa16.93■□□□□ 0.3
SKA3-203ENST00000400018 MYT1Q01538 1121 aa16.93■□□□□ 0.3
SKA3-203ENST00000400018 MLH3Q9UHC1 1453 aa16.92■□□□□ 0.3
SKA3-203ENST00000400018 DIP2CQ9Y2E4 1556 aa16.92■□□□□ 0.3
SKA3-203ENST00000400018 WASHC2CQ9Y4E1 1318 aa16.91■□□□□ 0.3
SKA3-203ENST00000400018 TONSLQ96HA7 1378 aa16.9■□□□□ 0.3
SKA3-203ENST00000400018 ERBINQ96RT1 1412 aa16.9■□□□□ 0.3
SKA3-203ENST00000400018 FBXO31Q5XUX0 539 aaPredicted RBP16.89■□□□□ 0.29
SKA3-203ENST00000400018 NUTM2DQ5VT03 806 aaPredicted RBP16.88■□□□□ 0.29
SKA3-203ENST00000400018 CHGAP10645 457 aaKnown RBP16.87■□□□□ 0.29
SKA3-203ENST00000400018 UGGT1Q9NYU2 1555 aa16.87■□□□□ 0.29
SKA3-203ENST00000400018 PLA2R1Q13018 1463 aa16.87■□□□□ 0.29
SKA3-203ENST00000400018 MROH1Q8NDA8 1641 aa16.85■□□□□ 0.29
SKA3-203ENST00000400018 CLSPNQ9HAW4 1339 aa16.85■□□□□ 0.29
SKA3-203ENST00000400018 NBPF8Q3BBV2 869 aa16.85■□□□□ 0.29
SKA3-203ENST00000400018 CEBPAP49715 358 aaPredicted RBP16.84■□□□□ 0.29
SKA3-203ENST00000400018 PPP1R15AO75807 674 aaPredicted RBP16.84■□□□□ 0.29
SKA3-203ENST00000400018 CEP152O94986 1710 aa16.84■□□□□ 0.29
SKA3-203ENST00000400018 UNC13BO14795 1591 aa16.83■□□□□ 0.29
SKA3-203ENST00000400018 DCAF11Q8TEB1 546 aa16.83■□□□□ 0.28
SKA3-203ENST00000400018 ATP10AO60312 1499 aa16.81■□□□□ 0.28
SKA3-203ENST00000400018 E9PCH4 1651 aa16.8■□□□□ 0.28
SKA3-203ENST00000400018 KANK1Q14678 1352 aa16.8■□□□□ 0.28
SKA3-203ENST00000400018 IQGAP3Q86VI3 1631 aa16.79■□□□□ 0.28
SKA3-203ENST00000400018 SCAF1Q9H7N4 1312 aaKnown RBP16.78■□□□□ 0.28
SKA3-203ENST00000400018 KDM5DQ9BY66 1539 aa16.78■□□□□ 0.28
SKA3-203ENST00000400018 MAGI2Q86UL8 1455 aa16.78■□□□□ 0.28
SKA3-203ENST00000400018 RPRD2Q5VT52 1461 aaKnown RBP16.77■□□□□ 0.28
SKA3-203ENST00000400018 CCDC144AA2RUR9 1427 aa16.77■□□□□ 0.27
SKA3-203ENST00000400018 NPATQ14207 1427 aa16.77■□□□□ 0.27
SKA3-203ENST00000400018 PRDM15P57071 1507 aaPredicted RBP16.76■□□□□ 0.27
SKA3-203ENST00000400018 ZMYM4Q5VZL5 1548 aa16.76■□□□□ 0.27
SKA3-203ENST00000400018 DEPDC5O75140 1603 aa16.75■□□□□ 0.27
SKA3-203ENST00000400018 ABCC3O15438 1527 aa16.72■□□□□ 0.27
SKA3-203ENST00000400018 ARHGEF40Q8TER5 1519 aa16.71■□□□□ 0.27
SKA3-203ENST00000400018 NBPF1Q3BBV0 1214 aa16.71■□□□□ 0.27
SKA3-203ENST00000400018 ESF1Q9H501 851 aaKnown RBP16.71■□□□□ 0.27
SKA3-203ENST00000400018 IDI1Q13907 227 aa16.7■□□□□ 0.26
SKA3-203ENST00000400018 VWDEQ8N2E2 1590 aa16.7■□□□□ 0.26
SKA3-203ENST00000400018 ZNF316A6NFI3 1004 aaPredicted RBP16.7■□□□□ 0.26
SKA3-203ENST00000400018 EIF2AK4Q9P2K8 1649 aaKnown RBP16.7■□□□□ 0.26
SKA3-203ENST00000400018 RNF17Q9BXT8 1623 aaKnown RBP16.68■□□□□ 0.26
SKA3-203ENST00000400018 CLTCL1P53675 1640 aa16.68■□□□□ 0.26
SKA3-203ENST00000400018 EFCAB6Q5THR3 1501 aa16.68■□□□□ 0.26
SKA3-203ENST00000400018 CLTCQ00610 1675 aaKnown RBP16.68■□□□□ 0.26
SKA3-203ENST00000400018 TET3O43151 1660 aa16.67■□□□□ 0.26
SKA3-203ENST00000400018 CAMSAP1Q5T5Y3 1602 aa16.64■□□□□ 0.26
SKA3-203ENST00000400018 POLR3GLQ9BT43 218 aa16.64■□□□□ 0.25
SKA3-203ENST00000400018 SPHKAPQ2M3C7 1700 aa16.64■□□□□ 0.25
SKA3-203ENST00000400018 ADGRF5Q8IZF2 1346 aa16.64■□□□□ 0.25
SKA3-203ENST00000400018 ZMYM3Q14202 1370 aa16.64■□□□□ 0.25
SKA3-203ENST00000400018 CNGB1Q14028 1251 aaPredicted RBP16.64■□□□□ 0.25
SKA3-203ENST00000400018 HSPA5P11021 654 aaKnown RBP16.63■□□□□ 0.25
SKA3-203ENST00000400018 PTPRTO14522 1441 aa16.62■□□□□ 0.25
SKA3-203ENST00000400018 STAG3Q9UJ98 1225 aa16.61■□□□□ 0.25
SKA3-203ENST00000400018 C11orf95C9JLR9 678 aaPredicted RBP16.61■□□□□ 0.25
SKA3-203ENST00000400018 SYNMO15061 1565 aa16.6■□□□□ 0.25
SKA3-203ENST00000400018 CFAP70Q5T0N1 1121 aa16.6■□□□□ 0.25
SKA3-203ENST00000400018 SPATA31E1Q6ZUB1 1445 aa16.59■□□□□ 0.25
SKA3-203ENST00000400018 TRPM2O94759 1503 aa16.59■□□□□ 0.25
SKA3-203ENST00000400018 MROH2AA6NES4 1674 aa16.59■□□□□ 0.25
SKA3-203ENST00000400018 TMEM132EQ6IEE7 984 aa16.59■□□□□ 0.25
SKA3-203ENST00000400018 CARD11Q9BXL7 1154 aa16.58■□□□□ 0.25
SKA3-203ENST00000400018 TIMELESSQ9UNS1 1208 aa16.58■□□□□ 0.25
SKA3-203ENST00000400018 DDX10Q13206 875 aaKnown RBP16.58■□□□□ 0.24
SKA3-203ENST00000400018 DIEXFQ68CQ4 756 aaKnown RBP16.57■□□□□ 0.24
SKA3-203ENST00000400018 LMTK2Q8IWU2 1503 aa16.57■□□□□ 0.24
SKA3-203ENST00000400018 ACIN1Q9UKV3 1341 aaKnown RBP16.57■□□□□ 0.24
SKA3-203ENST00000400018 AGLP35573 1532 aa16.56■□□□□ 0.24
SKA3-203ENST00000400018 NOS1P29475 1434 aa16.56■□□□□ 0.24
SKA3-203ENST00000400018 BCORL1Q5H9F3 1711 aa16.55■□□□□ 0.24
SKA3-203ENST00000400018 MYO5BQ9ULV0 1848 aa16.54■□□□□ 0.24
SKA3-203ENST00000400018 ROCK2O75116 1388 aaKnown RBP16.53■□□□□ 0.24
SKA3-203ENST00000400018 ERVK-7P63135 1459 aa16.53■□□□□ 0.24
SKA3-203ENST00000400018 PREX1Q8TCU6 1659 aa16.53■□□□□ 0.24
SKA3-203ENST00000400018 ST20-MTHFSA0A0A6YYL1 179 aa16.53■□□□□ 0.24
SKA3-203ENST00000400018 SAFB2Q14151 953 aaKnown RBP eCLIP16.52■□□□□ 0.24
SKA3-203ENST00000400018 REREQ9P2R6 1566 aa16.52■□□□□ 0.23
SKA3-203ENST00000400018 PRAG1Q86YV5 1406 aa16.52■□□□□ 0.23
SKA3-203ENST00000400018 EIF4G2P78344 907 aaKnown RBP eCLIP16.51■□□□□ 0.23
SKA3-203ENST00000400018 STK26Q9P289 416 aa16.51■□□□□ 0.23
SKA3-203ENST00000400018 CNTLNQ9NXG0 1405 aa16.5■□□□□ 0.23
SKA3-203ENST00000400018 MADDQ8WXG6 1647 aa16.5■□□□□ 0.23
SKA3-203ENST00000400018 BCANQ96GW7 911 aa16.49■□□□□ 0.23
SKA3-203ENST00000400018 USP47Q96K76 1375 aa16.49■□□□□ 0.23
SKA3-203ENST00000400018 KIF1BO60333 1816 aa16.48■□□□□ 0.23
SKA3-203ENST00000400018 ARHGAP31Q2M1Z3 1444 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms