RNA–Protein interactions for RNA: ENST00000399756.8

TRPV1-202, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-202ENST00000399756 BECN1Q14457 450 aa12.98□□□□□ -0.33
TRPV1-202ENST00000399756 RSPH4AQ5TD94 716 aa12.98□□□□□ -0.33
TRPV1-202ENST00000399756 PNISRQ8TF01 805 aaKnown RBP12.98□□□□□ -0.33
TRPV1-202ENST00000399756 PDE3BQ13370 1112 aa12.97□□□□□ -0.33
TRPV1-202ENST00000399756 SOX12O15370 315 aa12.97□□□□□ -0.33
TRPV1-202ENST00000399756 DAPK1P53355 1430 aa12.96□□□□□ -0.33
TRPV1-202ENST00000399756 PAK3O75914 559 aaPredicted RBP12.96□□□□□ -0.33
TRPV1-202ENST00000399756 SLKQ9H2G2 1235 aaPredicted RBP12.96□□□□□ -0.33
TRPV1-202ENST00000399756 MSH5O43196 834 aa12.96□□□□□ -0.33
TRPV1-202ENST00000399756 MAP3K1Q13233 1512 aa12.96□□□□□ -0.33
TRPV1-202ENST00000399756 AFAP1Q8N556 730 aa12.95□□□□□ -0.34
TRPV1-202ENST00000399756 ADAMTS8Q9UP79 889 aa12.95□□□□□ -0.34
TRPV1-202ENST00000399756 ANKRD30BQ9BXX2 1392 aa12.95□□□□□ -0.34
TRPV1-202ENST00000399756 MIA2Q96PC5 1412 aa12.94□□□□□ -0.34
TRPV1-202ENST00000399756 SUPT6HQ7KZ85 1726 aaKnown RBP12.94□□□□□ -0.34
TRPV1-202ENST00000399756 URB2Q14146 1524 aaKnown RBP12.94□□□□□ -0.34
TRPV1-202ENST00000399756 SKAP1Q86WV1 359 aa12.94□□□□□ -0.34
TRPV1-202ENST00000399756 KIAA1107Q9UPP5 1409 aa12.93□□□□□ -0.34
TRPV1-202ENST00000399756 PTPN23Q9H3S7 1636 aa12.92□□□□□ -0.34
TRPV1-202ENST00000399756 ZBTB7CA1YPR0 619 aa12.92□□□□□ -0.34
TRPV1-202ENST00000399756 COG6Q9Y2V7 657 aa12.91□□□□□ -0.34
TRPV1-202ENST00000399756 ABCC5O15440 1437 aa12.91□□□□□ -0.34
TRPV1-202ENST00000399756 TROQ12816 1431 aaPredicted RBP12.91□□□□□ -0.34
TRPV1-202ENST00000399756 MYH16Q9H6N6 1097 aa12.91□□□□□ -0.34
TRPV1-202ENST00000399756 SNAPC4Q5SXM2 1469 aa12.9□□□□□ -0.34
TRPV1-202ENST00000399756 PLB1Q6P1J6 1458 aa12.9□□□□□ -0.34
TRPV1-202ENST00000399756 C14orf37Q86TY3 774 aa12.9□□□□□ -0.34
TRPV1-202ENST00000399756 C9orf84Q5VXU9 1444 aa12.89□□□□□ -0.35
TRPV1-202ENST00000399756 CENPJQ9HC77 1338 aaPredicted RBP12.88□□□□□ -0.35
TRPV1-202ENST00000399756 CFAP70Q5T0N1 1121 aa12.88□□□□□ -0.35
TRPV1-202ENST00000399756 WASHC2CQ9Y4E1 1318 aa12.88□□□□□ -0.35
TRPV1-202ENST00000399756 HECW1Q76N89 1606 aa12.87□□□□□ -0.35
TRPV1-202ENST00000399756 ARID4BQ4LE39 1312 aaPredicted RBP12.87□□□□□ -0.35
TRPV1-202ENST00000399756 TMEM132EQ6IEE7 984 aa12.87□□□□□ -0.35
TRPV1-202ENST00000399756 ITPRIPQ8IWB1 547 aa12.87□□□□□ -0.35
TRPV1-202ENST00000399756 BRD4O60885 1362 aaPredicted RBP12.87□□□□□ -0.35
TRPV1-202ENST00000399756 APBB1O00213 710 aa12.87□□□□□ -0.35
TRPV1-202ENST00000399756 TPRNQ4KMQ1 711 aa12.87□□□□□ -0.35
TRPV1-202ENST00000399756 ZNF608Q9ULD9 1512 aaPredicted RBP12.87□□□□□ -0.35
TRPV1-202ENST00000399756 IQGAP2Q13576 1575 aa12.85□□□□□ -0.35
TRPV1-202ENST00000399756 GZF1Q9H116 711 aaPredicted RBP12.85□□□□□ -0.35
TRPV1-202ENST00000399756 SMC4Q9NTJ3 1288 aa12.85□□□□□ -0.35
TRPV1-202ENST00000399756 NCOA1Q15788 1441 aa12.85□□□□□ -0.35
TRPV1-202ENST00000399756 MRC2Q9UBG0 1479 aa12.85□□□□□ -0.35
TRPV1-202ENST00000399756 ELL2O00472 640 aaPredicted RBP12.84□□□□□ -0.35
TRPV1-202ENST00000399756 THOC2Q8NI27 1593 aaKnown RBP12.84□□□□□ -0.35
TRPV1-202ENST00000399756 EIF3AQ14152 1382 aaKnown RBP12.84□□□□□ -0.35
TRPV1-202ENST00000399756 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRPV1-202ENST00000399756 CUL7Q14999 1698 aa12.83□□□□□ -0.35
TRPV1-202ENST00000399756 NCLP19338 710 aaKnown RBP12.83□□□□□ -0.35
TRPV1-202ENST00000399756 ARHGEF11O15085 1522 aa12.83□□□□□ -0.35
TRPV1-202ENST00000399756 NUTM2FA1L443 756 aa12.83□□□□□ -0.36
TRPV1-202ENST00000399756 PPP2R1AP30153 589 aa12.83□□□□□ -0.36
TRPV1-202ENST00000399756 PANK1Q8TE04 598 aa12.83□□□□□ -0.36
TRPV1-202ENST00000399756 ANP32BQ92688 251 aaKnown RBP12.83□□□□□ -0.36
TRPV1-202ENST00000399756 CENPQQ7L2Z9 268 aaPredicted RBP12.83□□□□□ -0.36
TRPV1-202ENST00000399756 MFAP1P55081 439 aaKnown RBP12.83□□□□□ -0.36
TRPV1-202ENST00000399756 KIAA0586Q9BVV6 1533 aa12.82□□□□□ -0.36
TRPV1-202ENST00000399756 ROCK1Q13464 1354 aa12.82□□□□□ -0.36
TRPV1-202ENST00000399756 RPRD2Q5VT52 1461 aaKnown RBP12.81□□□□□ -0.36
TRPV1-202ENST00000399756 SMG6Q86US8 1419 aaKnown RBP12.81□□□□□ -0.36
TRPV1-202ENST00000399756 FAM161AQ3B820 660 aa12.81□□□□□ -0.36
TRPV1-202ENST00000399756 BCAR3O75815 825 aa12.8□□□□□ -0.36
TRPV1-202ENST00000399756 MINK1Q8N4C8 1332 aaPredicted RBP12.8□□□□□ -0.36
TRPV1-202ENST00000399756 CAMSAP2Q08AD1 1489 aa12.8□□□□□ -0.36
TRPV1-202ENST00000399756 E9PSI1 815 aa12.8□□□□□ -0.36
TRPV1-202ENST00000399756 RWDD1Q9H446 243 aaPredicted RBP12.8□□□□□ -0.36
TRPV1-202ENST00000399756 ARHGAP5Q13017 1502 aa12.8□□□□□ -0.36
TRPV1-202ENST00000399756 IFT140Q96RY7 1462 aa12.8□□□□□ -0.36
TRPV1-202ENST00000399756 C20orf194Q5TEA3 1177 aa12.8□□□□□ -0.36
TRPV1-202ENST00000399756 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.79□□□□□ -0.36
TRPV1-202ENST00000399756 HSP90AB1P08238 724 aaKnown RBP12.79□□□□□ -0.36
TRPV1-202ENST00000399756 SLC12A5Q9H2X9 1139 aa12.78□□□□□ -0.36
TRPV1-202ENST00000399756 HDGFL2Q7Z4V5 671 aaPredicted RBP12.78□□□□□ -0.36
TRPV1-202ENST00000399756 SYNJ2O15056 1496 aa12.78□□□□□ -0.36
TRPV1-202ENST00000399756 LAMC3Q9Y6N6 1575 aa12.77□□□□□ -0.36
TRPV1-202ENST00000399756 MS4A1P11836 297 aa12.77□□□□□ -0.36
TRPV1-202ENST00000399756 FOXD4L1Q9NU39 408 aa12.77□□□□□ -0.36
TRPV1-202ENST00000399756 GGNBP2Q9H3C7 697 aa12.76□□□□□ -0.37
TRPV1-202ENST00000399756 UGGT2Q9NYU1 1516 aa12.76□□□□□ -0.37
TRPV1-202ENST00000399756 MTHFSP49914 203 aa12.76□□□□□ -0.37
TRPV1-202ENST00000399756 HSCBQ8IWL3 235 aa12.76□□□□□ -0.37
TRPV1-202ENST00000399756 PMFBP1Q8TBY8 1022 aa12.75□□□□□ -0.37
TRPV1-202ENST00000399756 CABP2Q9NPB3 220 aa12.75□□□□□ -0.37
TRPV1-202ENST00000399756 BACH2Q9BYV9 841 aa12.74□□□□□ -0.37
TRPV1-202ENST00000399756 CGNL1Q0VF96 1302 aa12.74□□□□□ -0.37
TRPV1-202ENST00000399756 LMOD2Q6P5Q4 547 aa12.74□□□□□ -0.37
TRPV1-202ENST00000399756 TCP11L2Q8N4U5 519 aa12.74□□□□□ -0.37
TRPV1-202ENST00000399756 TRIM44Q96DX7 344 aaPredicted RBP12.74□□□□□ -0.37
TRPV1-202ENST00000399756 TERF2IPQ9NYB0 399 aa12.73□□□□□ -0.37
TRPV1-202ENST00000399756 IPO8O15397 1037 aaKnown RBP12.73□□□□□ -0.37
TRPV1-202ENST00000399756 GRIN2AQ12879 1464 aa12.73□□□□□ -0.37
TRPV1-202ENST00000399756 ERBINQ96RT1 1412 aa12.72□□□□□ -0.37
TRPV1-202ENST00000399756 MAGI1Q96QZ7 1491 aaPredicted RBP12.72□□□□□ -0.37
TRPV1-202ENST00000399756 GOLGA6L22H0YM25 854 aa12.72□□□□□ -0.37
TRPV1-202ENST00000399756 GPATCH8Q9UKJ3 1502 aaKnown RBP12.71□□□□□ -0.37
TRPV1-202ENST00000399756 PNNQ9H307 717 aaKnown RBP12.71□□□□□ -0.37
TRPV1-202ENST00000399756 CFAP43Q8NDM7 1665 aa12.71□□□□□ -0.38
TRPV1-202ENST00000399756 SCAPERQ9BY12 1400 aa12.7□□□□□ -0.38
TRPV1-202ENST00000399756 NFKBIBQ15653 356 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms