RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 FMN1Q68DA7 1419 aa15.13■□□□□ 0.01
CACNA1C-213ENST00000399629 TRAK1Q9UPV9 953 aa15.12■□□□□ 0.01
CACNA1C-213ENST00000399629 RSPH4AQ5TD94 716 aa15.12■□□□□ 0.01
CACNA1C-213ENST00000399629 NGEFQ8N5V2 710 aa15.12■□□□□ 0.01
CACNA1C-213ENST00000399629 JPH4Q96JJ6 628 aa15.12■□□□□ 0.01
CACNA1C-213ENST00000399629 COG3Q96JB2 828 aa15.12■□□□□ 0.01
CACNA1C-213ENST00000399629 TPM4P67936 248 aa15.11■□□□□ 0.01
CACNA1C-213ENST00000399629 CEP89Q96ST8 783 aa15.11■□□□□ 0.01
CACNA1C-213ENST00000399629 ERICH6BQ5W0A0 696 aa15.1■□□□□ 0.01
CACNA1C-213ENST00000399629 VPS37DQ86XT2 251 aa15.1■□□□□ 0.01
CACNA1C-213ENST00000399629 CREBRFQ8IUR6 639 aa15.1■□□□□ 0.01
CACNA1C-213ENST00000399629 SMC4Q9NTJ3 1288 aa15.09■□□□□ 0.01
CACNA1C-213ENST00000399629 HSPA5P11021 654 aaKnown RBP15.09■□□□□ 0.01
CACNA1C-213ENST00000399629 ANO8Q9HCE9 1232 aaPredicted RBP15.09■□□□□ 0.01
CACNA1C-213ENST00000399629 SETD5Q9C0A6 1442 aa15.08■□□□□ 0.01
CACNA1C-213ENST00000399629 PPP4R2Q9NY27 417 aa15.08■□□□□ 0.01
CACNA1C-213ENST00000399629 PPP1R1BQ9UD71 204 aaPredicted RBP15.08■□□□□ 0
CACNA1C-213ENST00000399629 TEFQ10587 303 aa15.08■□□□□ 0
CACNA1C-213ENST00000399629 CCDC18Q5T9S5 1454 aa15.08■□□□□ 0
CACNA1C-213ENST00000399629 RBM33Q96EV2 1170 aaKnown RBP15.07■□□□□ 0
CACNA1C-213ENST00000399629 MPHOSPH9Q99550 1183 aa15.07■□□□□ 0
CACNA1C-213ENST00000399629 RWDD1Q9H446 243 aaPredicted RBP15.07■□□□□ 0
CACNA1C-213ENST00000399629 UACAQ9BZF9 1416 aa15.07■□□□□ 0
CACNA1C-213ENST00000399629 AKAP17AQ02040 695 aaKnown RBP15.05■□□□□ 0
CACNA1C-213ENST00000399629 WASHC2AQ641Q2 1341 aa15.05■□□□□ -0
CACNA1C-213ENST00000399629 VGFO15240 615 aaPredicted RBP15.05■□□□□ -0
CACNA1C-213ENST00000399629 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.04■□□□□ -0
CACNA1C-213ENST00000399629 NEXNQ0ZGT2 675 aa15.04■□□□□ -0
CACNA1C-213ENST00000399629 RALBP1Q15311 655 aa15.03■□□□□ -0
CACNA1C-213ENST00000399629 WWC1Q8IX03 1113 aa15.03■□□□□ -0
CACNA1C-213ENST00000399629 A0A0U1RQG5 324 aaPredicted RBP15.03■□□□□ -0
CACNA1C-213ENST00000399629 SAMD1Q6SPF0 538 aaPredicted RBP15.02■□□□□ -0
CACNA1C-213ENST00000399629 PTPRGP23470 1445 aa15.02■□□□□ -0
CACNA1C-213ENST00000399629 CCDC146Q8IYE0 955 aa15.02■□□□□ -0
CACNA1C-213ENST00000399629 DHX16O60231 1041 aaKnown RBP15.01□□□□□ -0.01
CACNA1C-213ENST00000399629 SYNE3Q6ZMZ3 975 aa15.01□□□□□ -0.01
CACNA1C-213ENST00000399629 EVC2Q86UK5 1308 aa15□□□□□ -0.01
CACNA1C-213ENST00000399629 PMFBP1Q8TBY8 1022 aa15□□□□□ -0.01
CACNA1C-213ENST00000399629 NAP1L5Q96NT1 182 aaPredicted RBP15□□□□□ -0.01
CACNA1C-213ENST00000399629 MINK1Q8N4C8 1332 aaPredicted RBP15□□□□□ -0.01
CACNA1C-213ENST00000399629 EIF2S2P20042 333 aaKnown RBP15□□□□□ -0.01
CACNA1C-213ENST00000399629 LRRFIP1Q32MZ4 808 aaKnown RBP15□□□□□ -0.01
CACNA1C-213ENST00000399629 NOL8Q76FK4 1167 aaKnown RBP14.98□□□□□ -0.01
CACNA1C-213ENST00000399629 CSPP1Q1MSJ5 1256 aa14.98□□□□□ -0.01
CACNA1C-213ENST00000399629 MSNP26038 577 aaKnown RBP14.98□□□□□ -0.01
CACNA1C-213ENST00000399629 NUTM2BA6NNL0 878 aaPredicted RBP14.97□□□□□ -0.01
CACNA1C-213ENST00000399629 NUTM2EB1AL46 878 aaPredicted RBP14.97□□□□□ -0.01
CACNA1C-213ENST00000399629 NUTM2AQ8IVF1 878 aaPredicted RBP14.97□□□□□ -0.01
CACNA1C-213ENST00000399629 CCAR1Q8IX12 1150 aaKnown RBP14.97□□□□□ -0.01
CACNA1C-213ENST00000399629 KIF3AQ9Y496 699 aa14.97□□□□□ -0.01
CACNA1C-213ENST00000399629 CCDC88BA6NC98 1476 aa14.97□□□□□ -0.01
CACNA1C-213ENST00000399629 PES1O00541 588 aaKnown RBP14.97□□□□□ -0.01
CACNA1C-213ENST00000399629 SF3A1Q15459 793 aaKnown RBP14.96□□□□□ -0.01
CACNA1C-213ENST00000399629 TPD52L1Q16890 204 aaPredicted RBP14.96□□□□□ -0.01
CACNA1C-213ENST00000399629 RAPGEF4Q8WZA2 1011 aa14.96□□□□□ -0.01
CACNA1C-213ENST00000399629 CCDC43Q96MW1 224 aaKnown RBP14.96□□□□□ -0.01
CACNA1C-213ENST00000399629 CADPSQ9ULU8 1353 aa14.96□□□□□ -0.01
CACNA1C-213ENST00000399629 KIF16BQ96L93 1317 aa14.96□□□□□ -0.01
CACNA1C-213ENST00000399629 PTMSP20962 102 aa14.96□□□□□ -0.02
CACNA1C-213ENST00000399629 C9orf78Q9NZ63 289 aaPredicted RBP14.96□□□□□ -0.02
CACNA1C-213ENST00000399629 PIP4K2BP78356 416 aa14.95□□□□□ -0.02
CACNA1C-213ENST00000399629 SYAP1Q96A49 352 aaPredicted RBP14.95□□□□□ -0.02
CACNA1C-213ENST00000399629 DDX58O95786 925 aaKnown RBP14.95□□□□□ -0.02
CACNA1C-213ENST00000399629 TIMELESSQ9UNS1 1208 aa14.95□□□□□ -0.02
CACNA1C-213ENST00000399629 APPP05067 770 aa14.95□□□□□ -0.02
CACNA1C-213ENST00000399629 GBP4Q96PP9 640 aa14.94□□□□□ -0.02
CACNA1C-213ENST00000399629 CCDC144AA2RUR9 1427 aa14.94□□□□□ -0.02
CACNA1C-213ENST00000399629 TPM2P07951 284 aa14.94□□□□□ -0.02
CACNA1C-213ENST00000399629 FHOD3Q2V2M9 1422 aa14.94□□□□□ -0.02
CACNA1C-213ENST00000399629 H3BQV1 296 aa14.93□□□□□ -0.02
CACNA1C-213ENST00000399629 IFFO2Q5TF58 517 aa14.93□□□□□ -0.02
CACNA1C-213ENST00000399629 ABCC8Q09428 1581 aa14.93□□□□□ -0.02
CACNA1C-213ENST00000399629 RAPGEF2Q9Y4G8 1499 aa14.93□□□□□ -0.02
CACNA1C-213ENST00000399629 CGNL1Q0VF96 1302 aa14.93□□□□□ -0.02
CACNA1C-213ENST00000399629 MFAP1P55081 439 aaKnown RBP14.93□□□□□ -0.02
CACNA1C-213ENST00000399629 RILPL2Q969X0 211 aa14.93□□□□□ -0.02
CACNA1C-213ENST00000399629 NLRP2Q9NX02 1062 aa14.92□□□□□ -0.02
CACNA1C-213ENST00000399629 NECTIN2Q92692 538 aa14.92□□□□□ -0.02
CACNA1C-213ENST00000399629 RCAN3Q9UKA8 241 aa14.92□□□□□ -0.02
CACNA1C-213ENST00000399629 CLUAP1Q96AJ1 413 aa14.91□□□□□ -0.02
CACNA1C-213ENST00000399629 CENPJQ9HC77 1338 aaPredicted RBP14.91□□□□□ -0.02
CACNA1C-213ENST00000399629 FAM184AQ8NB25 1140 aa14.91□□□□□ -0.02
CACNA1C-213ENST00000399629 CHMP4CQ96CF2 233 aa14.91□□□□□ -0.02
CACNA1C-213ENST00000399629 USP35Q9P2H5 1018 aa14.91□□□□□ -0.02
CACNA1C-213ENST00000399629 RRP7AQ9Y3A4 280 aaKnown RBP14.9□□□□□ -0.02
CACNA1C-213ENST00000399629 ELL2O00472 640 aaPredicted RBP14.9□□□□□ -0.02
CACNA1C-213ENST00000399629 TPM3P06753 285 aa14.9□□□□□ -0.02
CACNA1C-213ENST00000399629 PROSER2Q86WR7 435 aaPredicted RBP14.9□□□□□ -0.02
CACNA1C-213ENST00000399629 TRIM29Q14134 588 aa14.89□□□□□ -0.03
CACNA1C-213ENST00000399629 NOP58Q9Y2X3 529 aaKnown RBP14.89□□□□□ -0.03
CACNA1C-213ENST00000399629 NUTM2GQ5VZR2 741 aa14.88□□□□□ -0.03
CACNA1C-213ENST00000399629 STRN4Q9NRL3 753 aa14.88□□□□□ -0.03
CACNA1C-213ENST00000399629 ERICH2A1L162 156 aa14.88□□□□□ -0.03
CACNA1C-213ENST00000399629 FYB1O15117 783 aa14.88□□□□□ -0.03
CACNA1C-213ENST00000399629 CCDC27Q2M243 656 aa14.88□□□□□ -0.03
CACNA1C-213ENST00000399629 KANK4Q5T7N3 995 aaPredicted RBP14.88□□□□□ -0.03
CACNA1C-213ENST00000399629 FANCD2Q9BXW9 1451 aa14.87□□□□□ -0.03
CACNA1C-213ENST00000399629 TSR1Q2NL82 804 aaKnown RBP14.87□□□□□ -0.03
CACNA1C-213ENST00000399629 GPRASP1Q5JY77 1395 aa14.87□□□□□ -0.03
CACNA1C-213ENST00000399629 PRDM2Q13029 1718 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms