RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 CDCA8Q53HL2 280 aa15.49■□□□□ 0.07
CACNA1C-209ENST00000399603 VPS8Q8N3P4 1428 aa15.49■□□□□ 0.07
CACNA1C-209ENST00000399603 TPM1P09493 284 aa15.49■□□□□ 0.07
CACNA1C-209ENST00000399603 BECN2A8MW95 431 aa15.48■□□□□ 0.07
CACNA1C-209ENST00000399603 HOMER1Q86YM7 354 aa15.48■□□□□ 0.07
CACNA1C-209ENST00000399603 GGT6Q6P531 493 aa15.47■□□□□ 0.07
CACNA1C-209ENST00000399603 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.47■□□□□ 0.07
CACNA1C-209ENST00000399603 TPM2P07951 284 aa15.47■□□□□ 0.07
CACNA1C-209ENST00000399603 PKD2Q13563 968 aa15.47■□□□□ 0.07
CACNA1C-209ENST00000399603 TRHP20396 242 aaPredicted RBP15.46■□□□□ 0.07
CACNA1C-209ENST00000399603 SAFB2Q14151 953 aaKnown RBP eCLIP15.46■□□□□ 0.07
CACNA1C-209ENST00000399603 AK7Q96M32 723 aa15.46■□□□□ 0.07
CACNA1C-209ENST00000399603 PODXL2Q9NZ53 605 aa15.46■□□□□ 0.06
CACNA1C-209ENST00000399603 ITPRIPQ8IWB1 547 aa15.45■□□□□ 0.06
CACNA1C-209ENST00000399603 TMX4Q9H1E5 349 aaPredicted RBP15.45■□□□□ 0.06
CACNA1C-209ENST00000399603 G3V3G9 751 aa15.45■□□□□ 0.06
CACNA1C-209ENST00000399603 DCAF8Q5TAQ9 597 aa15.45■□□□□ 0.06
CACNA1C-209ENST00000399603 PDS5BQ9NTI5 1447 aa15.45■□□□□ 0.06
CACNA1C-209ENST00000399603 MAPK8IP2Q13387 824 aaPredicted RBP15.44■□□□□ 0.06
CACNA1C-209ENST00000399603 HSPA5P11021 654 aaKnown RBP15.44■□□□□ 0.06
CACNA1C-209ENST00000399603 NAP1L1P55209 391 aaKnown RBP15.44■□□□□ 0.06
CACNA1C-209ENST00000399603 RTF1Q92541 710 aaKnown RBP15.43■□□□□ 0.06
CACNA1C-209ENST00000399603 H3BQV1 296 aa15.43■□□□□ 0.06
CACNA1C-209ENST00000399603 IPO7O95373 1038 aaKnown RBP15.43■□□□□ 0.06
CACNA1C-209ENST00000399603 IFFO2Q5TF58 517 aa15.43■□□□□ 0.06
CACNA1C-209ENST00000399603 CDR1P51861 262 aa15.42■□□□□ 0.06
CACNA1C-209ENST00000399603 CADPSQ9ULU8 1353 aa15.42■□□□□ 0.06
CACNA1C-209ENST00000399603 KIF16BQ96L93 1317 aa15.42■□□□□ 0.06
CACNA1C-209ENST00000399603 SETD5Q9C0A6 1442 aa15.41■□□□□ 0.06
CACNA1C-209ENST00000399603 FBXW7Q969H0 707 aa15.41■□□□□ 0.06
CACNA1C-209ENST00000399603 CCDC9Q9Y3X0 531 aaKnown RBP15.4■□□□□ 0.06
CACNA1C-209ENST00000399603 DDX49Q9Y6V7 483 aaKnown RBP15.4■□□□□ 0.06
CACNA1C-209ENST00000399603 RAD21O60216 631 aa15.4■□□□□ 0.06
CACNA1C-209ENST00000399603 FHOD3Q2V2M9 1422 aa15.39■□□□□ 0.05
CACNA1C-209ENST00000399603 TSPYL1Q9H0U9 437 aa15.39■□□□□ 0.05
CACNA1C-209ENST00000399603 TCEAL9Q9UHQ7 104 aa15.39■□□□□ 0.05
CACNA1C-209ENST00000399603 KIF3AQ9Y496 699 aa15.39■□□□□ 0.05
CACNA1C-209ENST00000399603 ARHGAP35Q9NRY4 1499 aa15.39■□□□□ 0.05
CACNA1C-209ENST00000399603 TCERG1O14776 1098 aaKnown RBP15.38■□□□□ 0.05
CACNA1C-209ENST00000399603 HSP90B2PQ58FF3 399 aa15.38■□□□□ 0.05
CACNA1C-209ENST00000399603 CT47A1Q5JQC4 288 aaPredicted RBP15.38■□□□□ 0.05
CACNA1C-209ENST00000399603 FRAT2O75474 233 aaPredicted RBP15.38■□□□□ 0.05
CACNA1C-209ENST00000399603 DCTN1Q14203 1278 aa15.38■□□□□ 0.05
CACNA1C-209ENST00000399603 ZFYVE27Q5T4F4 411 aa15.38■□□□□ 0.05
CACNA1C-209ENST00000399603 PKNOX2Q96KN3 472 aa15.38■□□□□ 0.05
CACNA1C-209ENST00000399603 MCTP1Q6DN14 999 aa15.38■□□□□ 0.05
CACNA1C-209ENST00000399603 ODF2Q5BJF6 829 aa15.37■□□□□ 0.05
CACNA1C-209ENST00000399603 TMF1P82094 1093 aa15.37■□□□□ 0.05
CACNA1C-209ENST00000399603 GPATCH3Q96I76 525 aa15.37■□□□□ 0.05
CACNA1C-209ENST00000399603 CARMIL2Q6F5E8 1435 aa15.37■□□□□ 0.05
CACNA1C-209ENST00000399603 KANK1Q14678 1352 aa15.37■□□□□ 0.05
CACNA1C-209ENST00000399603 RWDD1Q9H446 243 aaPredicted RBP15.36■□□□□ 0.05
CACNA1C-209ENST00000399603 FAM184AQ8NB25 1140 aa15.36■□□□□ 0.05
CACNA1C-209ENST00000399603 IPO9Q96P70 1041 aaKnown RBP15.36■□□□□ 0.05
CACNA1C-209ENST00000399603 SMARCA2P51531 1590 aa15.36■□□□□ 0.05
CACNA1C-209ENST00000399603 MNS1Q8NEH6 495 aa15.35■□□□□ 0.05
CACNA1C-209ENST00000399603 STK26Q9P289 416 aa15.35■□□□□ 0.05
CACNA1C-209ENST00000399603 HSP90AB2PQ58FF8 381 aa15.35■□□□□ 0.05
CACNA1C-209ENST00000399603 SLC4A3P48751 1232 aa15.35■□□□□ 0.05
CACNA1C-209ENST00000399603 IPO8O15397 1037 aaKnown RBP15.34■□□□□ 0.05
CACNA1C-209ENST00000399603 RAB3GAP2Q9H2M9 1393 aa15.34■□□□□ 0.05
CACNA1C-209ENST00000399603 SRPK2P78362 688 aaKnown RBP15.34■□□□□ 0.05
CACNA1C-209ENST00000399603 MPHOSPH9Q99550 1183 aa15.34■□□□□ 0.05
CACNA1C-209ENST00000399603 ACBD3Q9H3P7 528 aa15.34■□□□□ 0.05
CACNA1C-209ENST00000399603 HNRNPMP52272 730 aaKnown RBP eCLIP15.34■□□□□ 0.05
CACNA1C-209ENST00000399603 CWC15Q9P013 229 aaKnown RBP15.33■□□□□ 0.05
CACNA1C-209ENST00000399603 DYDC1Q8WWB3 177 aa15.33■□□□□ 0.04
CACNA1C-209ENST00000399603 ST18O60284 1047 aa15.33■□□□□ 0.04
CACNA1C-209ENST00000399603 ARGLU1Q9NWB6 273 aaPredicted RBP15.33■□□□□ 0.04
CACNA1C-209ENST00000399603 DDX11L8A8MPP1 907 aa15.33■□□□□ 0.04
CACNA1C-209ENST00000399603 ATAD2BQ9ULI0 1458 aa15.33■□□□□ 0.04
CACNA1C-209ENST00000399603 EFCAB2Q5VUJ9 269 aa15.33■□□□□ 0.04
CACNA1C-209ENST00000399603 TTLL5Q6EMB2 1281 aa15.33■□□□□ 0.04
CACNA1C-209ENST00000399603 NUP155O75694 1391 aa15.33■□□□□ 0.04
CACNA1C-209ENST00000399603 AKAP17AQ02040 695 aaKnown RBP15.32■□□□□ 0.04
CACNA1C-209ENST00000399603 ANKRD62A6NC57 917 aa15.32■□□□□ 0.04
CACNA1C-209ENST00000399603 SLC4A10Q6U841 1118 aa15.31■□□□□ 0.04
CACNA1C-209ENST00000399603 PAF1Q8N7H5 531 aa15.31■□□□□ 0.04
CACNA1C-209ENST00000399603 IFT57Q9NWB7 429 aa15.31■□□□□ 0.04
CACNA1C-209ENST00000399603 NEFHP12036 1026 aa15.31■□□□□ 0.04
CACNA1C-209ENST00000399603 TOP2AP11388 1531 aaKnown RBP15.31■□□□□ 0.04
CACNA1C-209ENST00000399603 NUTM2DQ5VT03 806 aaPredicted RBP15.3■□□□□ 0.04
CACNA1C-209ENST00000399603 ANKRD20A12PQ8NF67 263 aa15.3■□□□□ 0.04
CACNA1C-209ENST00000399603 GSE1Q14687 1217 aa15.29■□□□□ 0.04
CACNA1C-209ENST00000399603 CAGE1Q8TC20 777 aa15.29■□□□□ 0.04
CACNA1C-209ENST00000399603 FMN1Q68DA7 1419 aa15.29■□□□□ 0.04
CACNA1C-209ENST00000399603 MORC1Q86VD1 984 aa15.29■□□□□ 0.04
CACNA1C-209ENST00000399603 KIF3BO15066 747 aa15.28■□□□□ 0.04
CACNA1C-209ENST00000399603 RAPGEF2Q9Y4G8 1499 aa15.28■□□□□ 0.04
CACNA1C-209ENST00000399603 RUSC2Q8N2Y8 1516 aa15.28■□□□□ 0.04
CACNA1C-209ENST00000399603 NEXNQ0ZGT2 675 aa15.28■□□□□ 0.04
CACNA1C-209ENST00000399603 R3HCC1Q9Y3T6 440 aaKnown RBP15.27■□□□□ 0.04
CACNA1C-209ENST00000399603 BCCIPQ9P287 314 aaKnown RBP eCLIP15.27■□□□□ 0.03
CACNA1C-209ENST00000399603 CSB-PGBD3P0DP91 1061 aa15.26■□□□□ 0.03
CACNA1C-209ENST00000399603 AXDND1Q5T1B0 1012 aaPredicted RBP15.26■□□□□ 0.03
CACNA1C-209ENST00000399603 CLUAP1Q96AJ1 413 aa15.26■□□□□ 0.03
CACNA1C-209ENST00000399603 RILPL2Q969X0 211 aa15.26■□□□□ 0.03
CACNA1C-209ENST00000399603 FAM43AQ8N2R8 423 aa15.26■□□□□ 0.03
CACNA1C-209ENST00000399603 CCDC66A2RUB6 948 aa15.26■□□□□ 0.03
CACNA1C-209ENST00000399603 RBM25P49756 843 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms