RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 ROCK2O75116 1388 aaKnown RBP18.8■□□□□ 0.6
PTPN6-202ENST00000399448 PLCH2O75038 1416 aa18.8■□□□□ 0.6
PTPN6-202ENST00000399448 FAM9BQ8IZU0 186 aa18.79■□□□□ 0.6
PTPN6-202ENST00000399448 CCDC144AA2RUR9 1427 aa18.78■□□□□ 0.6
PTPN6-202ENST00000399448 ZCCHC11Q5TAX3 1644 aaKnown RBP18.77■□□□□ 0.6
PTPN6-202ENST00000399448 EFCAB2Q5VUJ9 269 aa18.77■□□□□ 0.6
PTPN6-202ENST00000399448 POLR3GLQ9BT43 218 aa18.77■□□□□ 0.6
PTPN6-202ENST00000399448 DUOX2Q9NRD8 1548 aa18.77■□□□□ 0.59
PTPN6-202ENST00000399448 ZBED9Q6R2W3 1325 aa18.75■□□□□ 0.59
PTPN6-202ENST00000399448 IQGAP3Q86VI3 1631 aa18.75■□□□□ 0.59
PTPN6-202ENST00000399448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.75■□□□□ 0.59
PTPN6-202ENST00000399448 PLA2R1Q13018 1463 aa18.74■□□□□ 0.59
PTPN6-202ENST00000399448 ST20-MTHFSA0A0A6YYL1 179 aa18.74■□□□□ 0.59
PTPN6-202ENST00000399448 ERBINQ96RT1 1412 aa18.74■□□□□ 0.59
PTPN6-202ENST00000399448 PRAG1Q86YV5 1406 aa18.72■□□□□ 0.59
PTPN6-202ENST00000399448 MAGI2Q86UL8 1455 aa18.71■□□□□ 0.59
PTPN6-202ENST00000399448 ABCC1P33527 1531 aa18.7■□□□□ 0.58
PTPN6-202ENST00000399448 ERICH6BQ5W0A0 696 aa18.69■□□□□ 0.58
PTPN6-202ENST00000399448 ATP10AO60312 1499 aa18.69■□□□□ 0.58
PTPN6-202ENST00000399448 TRPM1Q7Z4N2 1603 aa18.69■□□□□ 0.58
PTPN6-202ENST00000399448 RGL3Q3MIN7 710 aa18.68■□□□□ 0.58
PTPN6-202ENST00000399448 A2MP01023 1474 aa18.67■□□□□ 0.58
PTPN6-202ENST00000399448 TRAPPC8Q9Y2L5 1435 aa18.67■□□□□ 0.58
PTPN6-202ENST00000399448 ARAP3Q8WWN8 1544 aa18.66■□□□□ 0.58
PTPN6-202ENST00000399448 GPRASP1Q5JY77 1395 aa18.66■□□□□ 0.58
PTPN6-202ENST00000399448 KTN1Q86UP2 1357 aaKnown RBP18.65■□□□□ 0.58
PTPN6-202ENST00000399448 RTEL1-TNFRSF6BF6WH68 1400 aa18.65■□□□□ 0.58
PTPN6-202ENST00000399448 SPAG9O60271 1321 aaKnown RBP18.63■□□□□ 0.57
PTPN6-202ENST00000399448 CNGB1Q14028 1251 aaPredicted RBP18.63■□□□□ 0.57
PTPN6-202ENST00000399448 LAMC1P11047 1609 aa18.63■□□□□ 0.57
PTPN6-202ENST00000399448 NBPF1Q3BBV0 1214 aa18.62■□□□□ 0.57
PTPN6-202ENST00000399448 RALBP1Q15311 655 aa18.62■□□□□ 0.57
PTPN6-202ENST00000399448 PNISRQ8TF01 805 aaKnown RBP18.61■□□□□ 0.57
PTPN6-202ENST00000399448 E9PCH4 1651 aa18.61■□□□□ 0.57
PTPN6-202ENST00000399448 IRX6P78412 446 aaPredicted RBP18.61■□□□□ 0.57
PTPN6-202ENST00000399448 TMC1Q8TDI8 760 aa18.61■□□□□ 0.57
PTPN6-202ENST00000399448 EIF2AK4Q9P2K8 1649 aaKnown RBP18.6■□□□□ 0.57
PTPN6-202ENST00000399448 PRDM15P57071 1507 aaPredicted RBP18.59■□□□□ 0.57
PTPN6-202ENST00000399448 AFAP1Q8N556 730 aa18.58■□□□□ 0.57
PTPN6-202ENST00000399448 WDR7Q9Y4E6 1490 aa18.58■□□□□ 0.57
PTPN6-202ENST00000399448 MYBBP1AQ9BQG0 1328 aaKnown RBP18.58■□□□□ 0.57
PTPN6-202ENST00000399448 BRD4O60885 1362 aaPredicted RBP18.58■□□□□ 0.56
PTPN6-202ENST00000399448 SMG6Q86US8 1419 aaKnown RBP18.58■□□□□ 0.56
PTPN6-202ENST00000399448 PPP4R2Q9NY27 417 aa18.57■□□□□ 0.56
PTPN6-202ENST00000399448 ZFYVE16Q7Z3T8 1539 aa18.57■□□□□ 0.56
PTPN6-202ENST00000399448 TESK2Q96S53 571 aa18.55■□□□□ 0.56
PTPN6-202ENST00000399448 COL17A1Q9UMD9 1497 aaPredicted RBP18.54■□□□□ 0.56
PTPN6-202ENST00000399448 LRPPRCP42704 1394 aaKnown RBP18.53■□□□□ 0.56
PTPN6-202ENST00000399448 FANCAO15360 1455 aa18.53■□□□□ 0.56
PTPN6-202ENST00000399448 NUDCQ9Y266 331 aa18.52■□□□□ 0.56
PTPN6-202ENST00000399448 ABCA9Q8IUA7 1624 aa18.52■□□□□ 0.56
PTPN6-202ENST00000399448 WASHC2CQ9Y4E1 1318 aa18.52■□□□□ 0.56
PTPN6-202ENST00000399448 PER1O15534 1290 aaPredicted RBP18.52■□□□□ 0.56
PTPN6-202ENST00000399448 STAC3Q96MF2 364 aa18.52■□□□□ 0.56
PTPN6-202ENST00000399448 PTPRTO14522 1441 aa18.51■□□□□ 0.55
PTPN6-202ENST00000399448 TRPM2O94759 1503 aa18.51■□□□□ 0.55
PTPN6-202ENST00000399448 PARD3Q8TEW0 1356 aa18.51■□□□□ 0.55
PTPN6-202ENST00000399448 DEPDC5O75140 1603 aa18.51■□□□□ 0.55
PTPN6-202ENST00000399448 TMF1P82094 1093 aa18.5■□□□□ 0.55
PTPN6-202ENST00000399448 RBM19Q9Y4C8 960 aaKnown RBP18.5■□□□□ 0.55
PTPN6-202ENST00000399448 ATP7AQ04656 1500 aa18.5■□□□□ 0.55
PTPN6-202ENST00000399448 DISP3Q9P2K9 1392 aa18.49■□□□□ 0.55
PTPN6-202ENST00000399448 RNF17Q9BXT8 1623 aaKnown RBP18.49■□□□□ 0.55
PTPN6-202ENST00000399448 NLRP13Q86W25 1043 aa18.49■□□□□ 0.55
PTPN6-202ENST00000399448 INO80Q9ULG1 1556 aaPredicted RBP18.49■□□□□ 0.55
PTPN6-202ENST00000399448 KANK1Q14678 1352 aa18.49■□□□□ 0.55
PTPN6-202ENST00000399448 TET3O43151 1660 aa18.47■□□□□ 0.55
PTPN6-202ENST00000399448 SCAPERQ9BY12 1400 aa18.47■□□□□ 0.55
PTPN6-202ENST00000399448 SPHKAPQ2M3C7 1700 aa18.47■□□□□ 0.55
PTPN6-202ENST00000399448 VWDEQ8N2E2 1590 aa18.46■□□□□ 0.55
PTPN6-202ENST00000399448 ADGRL1O94910 1474 aa18.46■□□□□ 0.55
PTPN6-202ENST00000399448 RNF123Q5XPI4 1314 aa18.46■□□□□ 0.55
PTPN6-202ENST00000399448 CEP152O94986 1710 aa18.45■□□□□ 0.54
PTPN6-202ENST00000399448 MADDQ8WXG6 1647 aa18.45■□□□□ 0.54
PTPN6-202ENST00000399448 ASXL2Q76L83 1435 aa18.45■□□□□ 0.54
PTPN6-202ENST00000399448 PANK3Q9H999 370 aa18.44■□□□□ 0.54
PTPN6-202ENST00000399448 KIF3BO15066 747 aa18.44■□□□□ 0.54
PTPN6-202ENST00000399448 MYT1LQ9UL68 1186 aa18.44■□□□□ 0.54
PTPN6-202ENST00000399448 CLTCL1P53675 1640 aa18.43■□□□□ 0.54
PTPN6-202ENST00000399448 NEURL4Q96JN8 1562 aa18.4■□□□□ 0.54
PTPN6-202ENST00000399448 IQGAP1P46940 1657 aa18.4■□□□□ 0.54
PTPN6-202ENST00000399448 B4GALNT3Q6L9W6 998 aa18.4■□□□□ 0.54
PTPN6-202ENST00000399448 SCAF11Q99590 1463 aaKnown RBP18.39■□□□□ 0.53
PTPN6-202ENST00000399448 CC2D1BQ5T0F9 858 aaKnown RBP18.38■□□□□ 0.53
PTPN6-202ENST00000399448 INSRP06213 1382 aa18.38■□□□□ 0.53
PTPN6-202ENST00000399448 CDCA8Q53HL2 280 aa18.38■□□□□ 0.53
PTPN6-202ENST00000399448 NPM1P06748 294 aaKnown RBP eCLIP18.37■□□□□ 0.53
PTPN6-202ENST00000399448 MROH1Q8NDA8 1641 aa18.37■□□□□ 0.53
PTPN6-202ENST00000399448 SENP3-EIF4A1A0A087X0R7 540 aa18.36■□□□□ 0.53
PTPN6-202ENST00000399448 PDE3BQ13370 1112 aa18.36■□□□□ 0.53
PTPN6-202ENST00000399448 KIAA1210Q9ULL0 1709 aa18.35■□□□□ 0.53
PTPN6-202ENST00000399448 ZMYM4Q5VZL5 1548 aa18.34■□□□□ 0.53
PTPN6-202ENST00000399448 OSCARQ8IYS5 282 aa18.34■□□□□ 0.53
PTPN6-202ENST00000399448 ZNF518AQ6AHZ1 1483 aa18.34■□□□□ 0.53
PTPN6-202ENST00000399448 KIDINS220Q9ULH0 1771 aa18.34■□□□□ 0.53
PTPN6-202ENST00000399448 EIF3AQ14152 1382 aaKnown RBP18.33■□□□□ 0.52
PTPN6-202ENST00000399448 EFCAB6Q5THR3 1501 aa18.32■□□□□ 0.52
PTPN6-202ENST00000399448 KNSTRNQ9Y448 316 aa18.31■□□□□ 0.52
PTPN6-202ENST00000399448 MYOM2P54296 1465 aa18.31■□□□□ 0.52
PTPN6-202ENST00000399448 LMTK2Q8IWU2 1503 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms