RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 ADGRL1O94910 1474 aa16.41■□□□□ 0.22
COL25A1-202ENST00000399127 CCER2I3L3R5 266 aa16.41■□□□□ 0.22
COL25A1-202ENST00000399127 CCDC7Q96M83 1385 aa16.39■□□□□ 0.21
COL25A1-202ENST00000399127 SPATA31E1Q6ZUB1 1445 aa16.39■□□□□ 0.21
COL25A1-202ENST00000399127 DCAF11Q8TEB1 546 aa16.38■□□□□ 0.21
COL25A1-202ENST00000399127 PLXNC1O60486 1568 aa16.38■□□□□ 0.21
COL25A1-202ENST00000399127 FAM69CQ0P6D2 419 aa16.37■□□□□ 0.21
COL25A1-202ENST00000399127 KIF7Q2M1P5 1343 aa16.37■□□□□ 0.21
COL25A1-202ENST00000399127 POLR3GLQ9BT43 218 aa16.36■□□□□ 0.21
COL25A1-202ENST00000399127 USP47Q96K76 1375 aa16.36■□□□□ 0.21
COL25A1-202ENST00000399127 UNC13BO14795 1591 aa16.35■□□□□ 0.21
COL25A1-202ENST00000399127 CNTLNQ9NXG0 1405 aa16.35■□□□□ 0.21
COL25A1-202ENST00000399127 RGL3Q3MIN7 710 aa16.35■□□□□ 0.21
COL25A1-202ENST00000399127 DUOX2Q9NRD8 1548 aa16.35■□□□□ 0.21
COL25A1-202ENST00000399127 CCDC144AA2RUR9 1427 aa16.34■□□□□ 0.21
COL25A1-202ENST00000399127 CARD11Q9BXL7 1154 aa16.32■□□□□ 0.2
COL25A1-202ENST00000399127 PLA2R1Q13018 1463 aa16.32■□□□□ 0.2
COL25A1-202ENST00000399127 ERBINQ96RT1 1412 aa16.31■□□□□ 0.2
COL25A1-202ENST00000399127 RTEL1-TNFRSF6BF6WH68 1400 aa16.31■□□□□ 0.2
COL25A1-202ENST00000399127 UHRF1BP1Q6BDS2 1440 aa16.31■□□□□ 0.2
COL25A1-202ENST00000399127 CNGB1Q14028 1251 aaPredicted RBP16.3■□□□□ 0.2
COL25A1-202ENST00000399127 ZFYVE16Q7Z3T8 1539 aa16.3■□□□□ 0.2
COL25A1-202ENST00000399127 IQGAP3Q86VI3 1631 aa16.3■□□□□ 0.2
COL25A1-202ENST00000399127 RAPGEF3O95398 923 aa16.29■□□□□ 0.2
COL25A1-202ENST00000399127 ATP7AQ04656 1500 aa16.29■□□□□ 0.2
COL25A1-202ENST00000399127 BCORL1Q5H9F3 1711 aa16.29■□□□□ 0.2
COL25A1-202ENST00000399127 RALGAPBQ86X10 1494 aa16.29■□□□□ 0.2
COL25A1-202ENST00000399127 KDM5CP41229 1560 aa16.29■□□□□ 0.2
COL25A1-202ENST00000399127 CFAP74Q9C0B2 1584 aa16.28■□□□□ 0.2
COL25A1-202ENST00000399127 CCDC184Q52MB2 194 aa16.27■□□□□ 0.2
COL25A1-202ENST00000399127 ZNF518AQ6AHZ1 1483 aa16.27■□□□□ 0.2
COL25A1-202ENST00000399127 KIF3BO15066 747 aa16.27■□□□□ 0.2
COL25A1-202ENST00000399127 POLR1AO95602 1720 aaPredicted RBP16.26■□□□□ 0.19
COL25A1-202ENST00000399127 PRKRIP1Q9H875 184 aaPredicted RBP16.26■□□□□ 0.19
COL25A1-202ENST00000399127 MAGI2Q86UL8 1455 aa16.26■□□□□ 0.19
COL25A1-202ENST00000399127 ROCK2O75116 1388 aaKnown RBP16.25■□□□□ 0.19
COL25A1-202ENST00000399127 ST20-MTHFSA0A0A6YYL1 179 aa16.25■□□□□ 0.19
COL25A1-202ENST00000399127 POGZQ7Z3K3 1410 aa16.25■□□□□ 0.19
COL25A1-202ENST00000399127 NEO1Q92859 1461 aa16.25■□□□□ 0.19
COL25A1-202ENST00000399127 INO80Q9ULG1 1556 aaPredicted RBP16.24■□□□□ 0.19
COL25A1-202ENST00000399127 MAP3K4Q9Y6R4 1608 aa16.24■□□□□ 0.19
COL25A1-202ENST00000399127 SUPT16HQ9Y5B9 1047 aaKnown RBP16.24■□□□□ 0.19
COL25A1-202ENST00000399127 GLI2P10070 1586 aa16.23■□□□□ 0.19
COL25A1-202ENST00000399127 DIP2BQ9P265 1576 aa16.23■□□□□ 0.19
COL25A1-202ENST00000399127 A2MP01023 1474 aa16.22■□□□□ 0.19
COL25A1-202ENST00000399127 HNRNPUQ00839 825 aaKnown RBP eCLIP16.22■□□□□ 0.19
COL25A1-202ENST00000399127 NBPF1Q3BBV0 1214 aa16.22■□□□□ 0.19
COL25A1-202ENST00000399127 PRAG1Q86YV5 1406 aa16.22■□□□□ 0.19
COL25A1-202ENST00000399127 DHX29Q7Z478 1369 aaKnown RBP16.22■□□□□ 0.19
COL25A1-202ENST00000399127 TSPOAP1O95153 1857 aa16.22■□□□□ 0.19
COL25A1-202ENST00000399127 KIDINS220Q9ULH0 1771 aa16.2■□□□□ 0.18
COL25A1-202ENST00000399127 MRS2Q9HD23 443 aa16.19■□□□□ 0.18
COL25A1-202ENST00000399127 FAM9BQ8IZU0 186 aa16.18■□□□□ 0.18
COL25A1-202ENST00000399127 E9PCH4 1651 aa16.18■□□□□ 0.18
COL25A1-202ENST00000399127 TRPM1Q7Z4N2 1603 aa16.18■□□□□ 0.18
COL25A1-202ENST00000399127 KANK1Q14678 1352 aa16.17■□□□□ 0.18
COL25A1-202ENST00000399127 ATP10AO60312 1499 aa16.17■□□□□ 0.18
COL25A1-202ENST00000399127 GGT6Q6P531 493 aa16.16■□□□□ 0.18
COL25A1-202ENST00000399127 MLH3Q9UHC1 1453 aa16.16■□□□□ 0.18
COL25A1-202ENST00000399127 HECW2Q9P2P5 1572 aa16.16■□□□□ 0.18
COL25A1-202ENST00000399127 DEPDC5O75140 1603 aa16.14■□□□□ 0.17
COL25A1-202ENST00000399127 ARID4BQ4LE39 1312 aaPredicted RBP16.14■□□□□ 0.17
COL25A1-202ENST00000399127 BCANQ96GW7 911 aa16.13■□□□□ 0.17
COL25A1-202ENST00000399127 FKBP8Q14318 412 aa16.12■□□□□ 0.17
COL25A1-202ENST00000399127 ABCA6Q8N139 1617 aa16.11■□□□□ 0.17
COL25A1-202ENST00000399127 YEATS2Q9ULM3 1422 aa16.11■□□□□ 0.17
COL25A1-202ENST00000399127 TRPM2O94759 1503 aa16.1■□□□□ 0.17
COL25A1-202ENST00000399127 SPHKAPQ2M3C7 1700 aa16.1■□□□□ 0.17
COL25A1-202ENST00000399127 RICTORQ6R327 1708 aa16.1■□□□□ 0.17
COL25A1-202ENST00000399127 TET3O43151 1660 aa16.1■□□□□ 0.17
COL25A1-202ENST00000399127 PPRC1Q5VV67 1664 aaKnown RBP16.09■□□□□ 0.17
COL25A1-202ENST00000399127 EIF2AK4Q9P2K8 1649 aaKnown RBP16.09■□□□□ 0.17
COL25A1-202ENST00000399127 CLTCL1P53675 1640 aa16.09■□□□□ 0.17
COL25A1-202ENST00000399127 GPRASP1Q5JY77 1395 aa16.09■□□□□ 0.17
COL25A1-202ENST00000399127 MROH1Q8NDA8 1641 aa16.08■□□□□ 0.16
COL25A1-202ENST00000399127 FRMPD1Q5SYB0 1578 aa16.08■□□□□ 0.16
COL25A1-202ENST00000399127 PTPRTO14522 1441 aa16.08■□□□□ 0.16
COL25A1-202ENST00000399127 KIF13AQ9H1H9 1805 aa16.08■□□□□ 0.16
COL25A1-202ENST00000399127 VWDEQ8N2E2 1590 aa16.07■□□□□ 0.16
COL25A1-202ENST00000399127 UGGT1Q9NYU2 1555 aa16.07■□□□□ 0.16
COL25A1-202ENST00000399127 PRDM15P57071 1507 aaPredicted RBP16.07■□□□□ 0.16
COL25A1-202ENST00000399127 DIP2CQ9Y2E4 1556 aa16.06■□□□□ 0.16
COL25A1-202ENST00000399127 WASHC2CQ9Y4E1 1318 aa16.06■□□□□ 0.16
COL25A1-202ENST00000399127 TRHP20396 242 aaPredicted RBP16.06■□□□□ 0.16
COL25A1-202ENST00000399127 DISP3Q9P2K9 1392 aa16.06■□□□□ 0.16
COL25A1-202ENST00000399127 CEP152O94986 1710 aa16.05■□□□□ 0.16
COL25A1-202ENST00000399127 TESK2Q96S53 571 aa16.05■□□□□ 0.16
COL25A1-202ENST00000399127 SENP3-EIF4A1A0A087X0R7 540 aa16.05■□□□□ 0.16
COL25A1-202ENST00000399127 NEFLP07196 543 aa16.05■□□□□ 0.16
COL25A1-202ENST00000399127 MADDQ8WXG6 1647 aa16.03■□□□□ 0.16
COL25A1-202ENST00000399127 TSHZ2Q9NRE2 1034 aa16.02■□□□□ 0.16
COL25A1-202ENST00000399127 LAMC1P11047 1609 aa16.02■□□□□ 0.15
COL25A1-202ENST00000399127 COL17A1Q9UMD9 1497 aaPredicted RBP16.01■□□□□ 0.15
COL25A1-202ENST00000399127 EFCAB6Q5THR3 1501 aa16.01■□□□□ 0.15
COL25A1-202ENST00000399127 RNF17Q9BXT8 1623 aaKnown RBP16.01■□□□□ 0.15
COL25A1-202ENST00000399127 CFAP65Q6ZU64 1925 aaKnown RBP16■□□□□ 0.15
COL25A1-202ENST00000399127 TMC1Q8TDI8 760 aa16■□□□□ 0.15
COL25A1-202ENST00000399127 ZMYM4Q5VZL5 1548 aa15.99■□□□□ 0.15
COL25A1-202ENST00000399127 CHGAP10645 457 aaKnown RBP15.99■□□□□ 0.15
COL25A1-202ENST00000399127 IRX6P78412 446 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms